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PDB: 656 results

7XS6
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BU of 7xs6 by Molmil
structure of a membrane-integrated glycosyltransferase with inhibitor
Descriptor: (19R,22S)-25-amino-22-hydroxy-22-oxido-16-oxo-17,21,23-trioxa-22lambda~5~-phosphapentacosan-19-yl (9Z)-hexadec-9-enoate, (2S)-{[(2S,3S,4S)-2-amino-4-hydroxy-4-(5-hydroxypyridin-2-yl)-3-methylbutanoyl]amino}[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxyoxolan-2-yl]acetic acid (non-preferred name), Chitin synthase 1, ...
Authors:Wu, Y.N, Zhang, M, Yang, Y.Z, Ding, X.Y, Liu, X.T, Zhang, M.J, Yu, H.J.
Deposit date:2022-05-12
Release date:2023-05-17
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:structure of a membrane-integrated glycosyltransferase with inhibitor
To Be Published
5Y22
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BU of 5y22 by Molmil
NMR-Based Model of the 22 Amino Acid Peptide in Polysialyltransferase Domain (PSTD) of the Polysialyltransferase ST8Sia IV
Descriptor: 22AA-PSTD peptide
Authors:Lu, B, Liao, S.M, Huang, J.M, Lu, Z.L, Chen, D, Liu, X.H, Zhou, G.P, Huang, R.B.
Deposit date:2017-07-23
Release date:2017-11-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR-Based Model of the 22 Amino Acid Peptide in Polysialyltransferase Domain (PSTD) of the Polysialyltransferase ST8Sia IV
To Be Published
8HOZ
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BU of 8hoz by Molmil
Crystal Structure of SARS-CoV-2 Omicron Main Protease (Mpro) in Complex with Nirmatrelvir
Descriptor: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5
Authors:Lin, M, Liu, X.
Deposit date:2022-12-11
Release date:2023-12-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Crystal Structure of SARS-CoV-2 Omicron Main Protease (Mpro) in Complex with Nirmatrelvir
To Be Published
7YKS
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BU of 7yks by Molmil
Structure of TRPA1 in Drosophila melanogaster in a state with 5 ankyrin repeats determined
Descriptor: Transient receptor potential cation channel subfamily A member 1
Authors:Sun, L, Liu, X, Yang, Z, Wang, X.
Deposit date:2022-07-23
Release date:2023-07-26
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular architecture and gating mechanisms of the Drosophila TRPA1 channel.
Cell Discov, 9, 2023
7YKR
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BU of 7ykr by Molmil
Structure of TRPA1 in Drosophila melanogaster in a state with 17 ankyrin repeats determined
Descriptor: Transient receptor potential cation channel subfamily A member 1
Authors:Sun, L, Liu, X, Yang, Z, Wang, X.
Deposit date:2022-07-23
Release date:2023-07-26
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular architecture and gating mechanisms of the Drosophila TRPA1 channel.
Cell Discov, 9, 2023
8ILS
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BU of 8ils by Molmil
Cryo-EM structure of PI3Kalpha in complex with compound 17
Descriptor: N-[(2R)-1-(ethylamino)-1-oxidanylidene-3-[4-(2-quinoxalin-6-ylethynyl)phenyl]propan-2-yl]-2,3-dimethyl-quinoxaline-6-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Zhou, Q, Liu, X, Neri, D, Li, W, Favalli, N, Bassi, G, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W.
Deposit date:2023-03-04
Release date:2023-09-13
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the interaction of three Y-shaped ligands with PI3K alpha.
Proc.Natl.Acad.Sci.USA, 120, 2023
5HP7
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BU of 5hp7 by Molmil
Crystal structures of RidA in the apo form
Descriptor: Reactive Intermediate Deaminase A, chloroplastic
Authors:Xie, W, Liu, X.
Deposit date:2016-01-20
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of RidA, an important enzyme for the prevention of toxic side products
Sci Rep, 6, 2016
6K51
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BU of 6k51 by Molmil
Solution structure of plectasin derivative MP1102
Descriptor: plectasin derivative MP1102
Authors:Wang, J.H, Mao, R.Y, Liu, X.H.
Deposit date:2019-05-28
Release date:2019-06-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of plectasin derivative MP1102
To Be Published
8ILR
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BU of 8ilr by Molmil
Cryo-EM structure of PI3Kalpha in complex with compound 16
Descriptor: N-[(2S)-1-(ethylamino)-1-oxidanylidene-3-[4-(2-quinoxalin-6-ylethynyl)phenyl]propan-2-yl]-2,3-dimethyl-quinoxaline-6-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Zhou, Q, Liu, X, Neri, D, Li, W, Favalli, N, Bassi, G, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W.
Deposit date:2023-03-04
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Structural insights into the interaction of three Y-shaped ligands with PI3K alpha.
Proc.Natl.Acad.Sci.USA, 120, 2023
8ILV
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BU of 8ilv by Molmil
Cryo-EM structure of PI3Kalpha in complex with compound 18
Descriptor: N-[(2R)-1-(ethylamino)-1-oxidanylidene-3-[3-(2-quinoxalin-6-ylethynyl)phenyl]propan-2-yl]-2,3-dimethyl-quinoxaline-6-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Zhou, Q, Liu, X, Neri, D, Li, W, Favalli, N, Bassi, G, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W.
Deposit date:2023-03-04
Release date:2023-09-06
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Structural insights into the interaction of three Y-shaped ligands with PI3K alpha.
Proc.Natl.Acad.Sci.USA, 120, 2023
6K50
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BU of 6k50 by Molmil
Solution structure of plectasin derivative NZ2114
Descriptor: PLECTASIN DERIVATIVE NZ2114
Authors:Wang, J.H, Mao, R.Y, Liu, X.H.
Deposit date:2019-05-28
Release date:2019-06-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of plectasin derivative NZ2114
To Be Published
8IWJ
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BU of 8iwj by Molmil
ABCG25 Wild Type in Apo-state
Descriptor: ABC transporter G family member 25
Authors:Sun, L, Liu, X, Ying, W, Liao, L, Wei, H.
Deposit date:2023-03-30
Release date:2024-04-10
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for abscisic acid efflux mediated by ABCG25 in Arabidopsis thaliana.
Nat.Plants, 9, 2023
6KIY
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BU of 6kiy by Molmil
Crystal structure of a thermostable aldo-keto reductase Tm1743 in complex with inhibitor Epalrestat
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Oxidoreductase, aldo/keto reductase family, ...
Authors:Zhang, C.Y, Liu, X.M, Wang, C, Min, Z.Z, Xu, X.L.
Deposit date:2019-07-20
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tolrestat acts atypically as a competitive inhibitor of the thermostable aldo-keto reductase Tm1743 from Thermotoga maritima.
Febs Lett., 594, 2020
8J69
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BU of 8j69 by Molmil
Crystal structure of HORMA domain-containing protein 1 (HORMAD1) from Homo sapiens
Descriptor: HORMA domain-containing protein 1
Authors:Yang, X.Y, Liu, X.H.
Deposit date:2023-04-25
Release date:2023-09-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Structural and biochemical insights into the interaction mechanism underlying HORMAD1 and its partner proteins.
Structure, 31, 2023
6KTR
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BU of 6ktr by Molmil
Crystal structure of fibroblast growth factor 19 in complex with Fab
Descriptor: Fibroblast growth factor 19, G1A8-Fab-HC, G1A8-Fab-LC, ...
Authors:Liu, H, Zheng, S, Hou, X, Liu, X, Lv, X, Li, Y, Li, W, Sui, J.
Deposit date:2019-08-28
Release date:2020-07-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.59775758 Å)
Cite:Novel Abs targeting the N-terminus of fibroblast growth factor 19 inhibit hepatocellular carcinoma growth without bile-acid-related side-effects.
Cancer Sci., 111, 2020
5H4R
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BU of 5h4r by Molmil
the complex of Glycoside Hydrolase 5 Lichenase from Caldicellulosiruptor sp. F32 E188Q mutant and cellotetraose
Descriptor: Beta-1,3-1,4-glucanase, GLYCEROL, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Dong, S, Zhou, H, Liu, X, Wang, X, Feng, Y.
Deposit date:2016-11-02
Release date:2017-09-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.70310438 Å)
Cite:Structural insights into the substrate specificity of a glycoside hydrolase family 5 lichenase from Caldicellulosiruptor sp. F32
Biochem. J., 474, 2017
3WB8
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BU of 3wb8 by Molmil
Crystal Structure of MyoVa-GTD
Descriptor: 1,2-ETHANEDIOL, Unconventional myosin-Va
Authors:Wei, Z, Liu, X, Yu, C, Zhang, M.
Deposit date:2013-05-13
Release date:2013-07-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Structural basis of cargo recognitions for class V myosins
Proc.Natl.Acad.Sci.USA, 110, 2013
4REG
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BU of 4reg by Molmil
Crystal Structure Analysis of PF0642
Descriptor: Uncharacterized protein
Authors:He, J.H, Zhou, H, Liu, X.P.
Deposit date:2014-09-23
Release date:2015-10-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.494 Å)
Cite:Structural and functional characterization of PF0642
To be Published
3NR2
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BU of 3nr2 by Molmil
Crystal structure of Caspase-6 zymogen
Descriptor: Caspase-6
Authors:Su, X.-D, Wang, X.-J, Liu, X, Mi, W, Wang, K.-T.
Deposit date:2010-06-30
Release date:2010-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of human caspase 6 reveal a new mechanism for intramolecular cleavage self-activation
Embo Rep., 11, 2010
2F7Z
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BU of 2f7z by Molmil
Protein Kinase A bound to (R)-1-(1H-Indol-3-ylmethyl)-2-(2-pyridin-4-yl-[1,7]naphtyridin-5-yloxy)-ehylamine
Descriptor: (1S)-1-(1H-INDOL-3-YLMETHYL)-2-(2-PYRIDIN-4-YL-[1,7]NAPHTYRIDIN-5-YLOXY)-EHYLAMINE, PKI, inhibitory peptide, ...
Authors:Li, Q, Woods, K.W, Thomas, S, Zhu, G.D, Packard, G, Fisher, J, Li, T, Gong, J, Dinges, J, Song, X, Abrams, J, Luo, Y, Johnson, E.F, Shi, Y, Liu, X, Klinghofer, V, Des Jong, R, Oltersdorf, T, Stoll, V.S, Jakob, C.G, Rosenberg, S.H, Giranda, V.L.
Deposit date:2005-12-01
Release date:2006-06-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Synthesis and structure-activity relationship of 3,4'-bispyridinylethylenes: discovery of a potent 3-isoquinolinylpyridine inhibitor of protein kinase B (PKB/Akt) for the treatment of cancer.
Bioorg.Med.Chem.Lett., 16, 2006
4ELQ
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BU of 4elq by Molmil
Ferric binding protein with carbonate
Descriptor: CARBONATE ION, Iron ABC transporter, periplasmic iron-binding protein
Authors:Wang, Q, Liu, X.Q, Wang, X.Q.
Deposit date:2012-04-11
Release date:2013-04-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.893 Å)
Cite:Crystal structure of ferric binding protein A
To be Published
6EG8
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BU of 6eg8 by Molmil
Structure of the GDP-bound Gs heterotrimer
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Hilger, D, Liu, X, Aschauer, P, Kobilka, B.K.
Deposit date:2018-08-19
Release date:2019-06-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Insights into the Process of GPCR-G Protein Complex Formation.
Cell, 177, 2019
8H3G
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BU of 8h3g by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) E166V Mutant in Complex with Inhibitor Enstrelvir
Descriptor: 3C-like proteinase nsp5, 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione, GLYCEROL
Authors:Wang, H, Lin, M, Duan, Y, Zhang, X, Zhou, H, Bian, Q, Liu, X, Rao, Z, Yang, H.
Deposit date:2022-10-08
Release date:2023-10-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Molecular mechanisms of SARS-CoV-2 resistance to nirmatrelvir.
Nature, 622, 2023
8H6I
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BU of 8h6i by Molmil
The crystal structure of SARS-CoV-2 3C-like protease Double Mutant (L50F and E166V) in complex with a traditional Chinese Medicine Inhibitors
Descriptor: (1beta,6beta,7beta,8alpha,9beta,10alpha,13alpha,14R,16beta)-1,6,7,14-tetrahydroxy-7,20-epoxykauran-15-one, 3C-like proteinase nsp5
Authors:Lin, M, Liu, X.
Deposit date:2022-10-17
Release date:2023-10-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular mechanisms of SARS-CoV-2 resistance to nirmatrelvir.
Nature, 622, 2023
8H7K
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BU of 8h7k by Molmil
SARS-CoV-2 Mpro Double Mutant (H41A and T21I) in complex with nsp4/5 peptidyl substrate
Descriptor: 3C-like proteinase nsp5, nsp4/5 peptidyl substrate
Authors:Lin, M, Liu, X.
Deposit date:2022-10-20
Release date:2023-10-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Molecular mechanisms of SARS-CoV-2 resistance to nirmatrelvir.
Nature, 622, 2023

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