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PDB: 566 results

4UDS
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BU of 4uds by Molmil
Crystal structure of MbdR regulator from Azoarcus sp. CIB
Descriptor: MBDR REGULATOR
Authors:Liu, H, Liu, H.X, MacMahon, S.A, Juarez, J.F, Zamarro, M.T, Eberlein, C, Boll, M, Carmona, M, Diaz, E, Naismith, J.H.
Deposit date:2014-12-11
Release date:2014-12-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Unraveling the Specific Regulation of the Mbd Central Pathway for the Anaerobic Degradation of 3-Methylbenzoate.
J.Biol.Chem., 290, 2015
8A3A
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BU of 8a3a by Molmil
MTH1 in complex with TH013074
Descriptor: 4-(4-methylphenyl)-1~{H}-quinazolin-2-one, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION
Authors:Liu, H, Scaletti, E, Stenmark, P.
Deposit date:2022-06-07
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:MTH1 in complex with TH013074
To Be Published
8A34
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BU of 8a34 by Molmil
MTH1 in complex with TH013071
Descriptor: 5-(2-phenylphenyl)-1H-pyrimidine-2,4-dione, 7,8-dihydro-8-oxoguanine triphosphatase, ACETATE ION, ...
Authors:Liu, H, Scaletti, E, Stenmark, P.
Deposit date:2022-06-07
Release date:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:MTH1 in complex with TH013071
To Be Published
3JA5
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BU of 3ja5 by Molmil
Genome and RdRp structure within the capsid of no-transcribing cypovirus
Descriptor: RNA-dependent RNA polymerase
Authors:Liu, H, Cheng, L.
Deposit date:2015-04-21
Release date:2015-10-28
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Cryo-EM shows the polymerase structures and a nonspooled genome within a dsRNA virus.
Science, 349, 2015
9KNU
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BU of 9knu by Molmil
Neck structure of bacteriophage Mu in contracted state
Descriptor: Gene product J, Portal protein
Authors:Liu, H.R, Zhou, J.Q.
Deposit date:2024-11-19
Release date:2025-02-12
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:In situ structures of the contractile nanomachine myophage Mu in both its extended and contracted states.
J.Virol., 99, 2025
9IN6
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BU of 9in6 by Molmil
Capsid of Vibrio cholerae phage mature VP1
Descriptor: SHP of VP1, major capsid of VP1
Authors:Liu, H.R, Pang, H.
Deposit date:2024-07-05
Release date:2024-08-14
Last modified:2024-12-18
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Three-dimensional structures of Vibrio cholerae typing podophage VP1 in two states.
Structure, 32, 2024
9JG6
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BU of 9jg6 by Molmil
The tail-complex structure of phage P22
Descriptor: Endorhamnosidase, P22 tail accessory factor, Phage stabilisation protein, ...
Authors:Liu, H.R, Xiao, H.
Deposit date:2024-09-06
Release date:2025-02-26
Last modified:2025-04-30
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structure of the scaffolding protein and portal within the bacteriophage P22 procapsid provides insights into the self-assembly process.
Plos Biol., 23, 2025
9JGA
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BU of 9jga by Molmil
P22 procapsid portal
Descriptor: Portal protein
Authors:Liu, H.R, Xiao, H.
Deposit date:2024-09-06
Release date:2025-02-26
Last modified:2025-04-30
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of the scaffolding protein and portal within the bacteriophage P22 procapsid provides insights into the self-assembly process.
Plos Biol., 23, 2025
5GSK
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BU of 5gsk by Molmil
Crystal structure of duplex DNA3 in complex with Hg(II) and Sr(II)
Descriptor: DNA (5'-D(*GP*GP*TP*CP*GP*TP*CP*C)-3'), MERCURY (II) ION, STRONTIUM ION
Authors:Liu, H.H, Wang, R, Yao, Q.Q, Cheng, Y.Q, Yang, C, Luo, Q, Wu, B.X, Li, J.X, Ma, J.B, Sheng, J, Gan, J.H.
Deposit date:2016-08-16
Release date:2017-02-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Flexibility and stabilization of HgII-mediated C:T and T:T base pairs in DNA duplex
Nucleic Acids Res., 45, 2017
9JYY
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BU of 9jyy by Molmil
core proteins of mature T7
Descriptor: Internal virion protein gp14, Internal virion protein gp15, Peptidoglycan transglycosylase gp16, ...
Authors:Liu, H.R, Chen, W.Y.
Deposit date:2024-10-13
Release date:2024-12-11
Method:ELECTRON MICROSCOPY (3 Å)
Cite:core proteins of mature T7
To Be Published
9JZ0
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BU of 9jz0 by Molmil
portal-tail complex of DNA-ejected T7
Descriptor: Internal virion protein gp14, Portal protein, Protein 6.7, ...
Authors:Liu, H.R, Chen, W.Y.
Deposit date:2024-10-13
Release date:2024-12-11
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:portal-tail complex of DNA-ejected T7
To Be Published
9JYZ
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BU of 9jyz by Molmil
portal-tail complex of mature T7
Descriptor: Portal protein, Protein 6.7, Protein 7.3, ...
Authors:Liu, H.R, Chen, W.Y.
Deposit date:2024-10-13
Release date:2024-12-11
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:portal-tail complex of mature T7
To Be Published
9LJ8
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BU of 9lj8 by Molmil
Tail structure of bacteriophage Mu in contracted state
Descriptor: Probable tail terminator protein, Tail sheath protein, Tail tube protein
Authors:Liu, H.R, Zhou, J.Q.
Deposit date:2025-01-14
Release date:2025-02-19
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:In situ structures of the contractile nanomachine myophage Mu in both its extended and contracted states.
J.Virol., 99, 2025
9N3F
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BU of 9n3f by Molmil
Crystal structure of Arabidopsis Metacaspase 9 C147G at pH 7.5
Descriptor: Metacaspase-9
Authors:Liu, H, Liu, Q.
Deposit date:2025-01-30
Release date:2025-06-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural determinants for pH-dependent activation of a plant metacaspase.
Nat Commun, 16, 2025
9KYX
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BU of 9kyx by Molmil
The scaffold tetramer of phage P22
Descriptor: Scaffolding protein
Authors:Liu, H.R, Xiao, H.
Deposit date:2024-12-09
Release date:2025-02-26
Last modified:2025-04-30
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Structure of the scaffolding protein and portal within the bacteriophage P22 procapsid provides insights into the self-assembly process.
Plos Biol., 23, 2025
9N3D
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BU of 9n3d by Molmil
Crystal structure of Arabidopsis metacaspase 9 C147G at pH 4.2
Descriptor: Metacaspase-9
Authors:Liu, H, Liu, Q.
Deposit date:2025-01-30
Release date:2025-06-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural determinants for pH-dependent activation of a plant metacaspase.
Nat Commun, 16, 2025
9N3E
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BU of 9n3e by Molmil
Crystal structure of Arabidopsis metacaspase 9 C147G at pH 5.5
Descriptor: Metacaspase-9
Authors:Liu, H, Liu, Q.
Deposit date:2025-01-30
Release date:2025-06-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural determinants for pH-dependent activation of a plant metacaspase.
Nat Commun, 16, 2025
9J0A
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BU of 9j0a by Molmil
Complex structure of ANKRD11/STAG2/RAD21
Descriptor: 64-kDa C-terminal product, Ankyrin repeat domain-containing protein 11, Cohesin subunit SA-2
Authors:Liu, H, Cai, Q, Zhang, M.
Deposit date:2024-08-02
Release date:2025-03-19
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:ANKRD11 binding to cohesin suggests a connection between KBG syndrome and Cornelia de Lange syndrome.
Proc.Natl.Acad.Sci.USA, 122, 2025
9KYV
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BU of 9kyv by Molmil
The scaffold dimer of phage P22
Descriptor: Scaffolding protein
Authors:Liu, H.R, Xiao, H.
Deposit date:2024-12-09
Release date:2025-02-26
Last modified:2025-04-30
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Structure of the scaffolding protein and portal within the bacteriophage P22 procapsid provides insights into the self-assembly process.
Plos Biol., 23, 2025
9KYW
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BU of 9kyw by Molmil
The scaffold C-loop of phage P22
Descriptor: Portal protein, Scaffolding protein
Authors:Liu, H.R, Xiao, H.
Deposit date:2024-12-09
Release date:2025-02-26
Last modified:2025-04-30
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Structure of the scaffolding protein and portal within the bacteriophage P22 procapsid provides insights into the self-assembly process.
Plos Biol., 23, 2025
9KYY
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BU of 9kyy by Molmil
The scaffold trimer of phage P22
Descriptor: Scaffolding protein
Authors:Liu, H.R, Xiao, H.
Deposit date:2024-12-09
Release date:2025-02-26
Last modified:2025-04-30
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Structure of the scaffolding protein and portal within the bacteriophage P22 procapsid provides insights into the self-assembly process.
Plos Biol., 23, 2025
6XKP
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BU of 6xkp by Molmil
Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CV07-270
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CV07-270 Heavy Chain, CV07-270 Light Chain, ...
Authors:Liu, H, Yuan, M, Zhu, X, Wu, N.C, Wilson, I.A.
Deposit date:2020-06-26
Release date:2020-10-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:A Therapeutic Non-self-reactive SARS-CoV-2 Antibody Protects from Lung Pathology in a COVID-19 Hamster Model.
Cell, 183, 2020
8F1G
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BU of 8f1g by Molmil
Crystal structure of human WDR5 in complex with compound WM662
Descriptor: (2S)-2-({(2S)-3-(3'-chloro[1,1'-biphenyl]-4-yl)-1-oxo-1-[(1H-tetrazol-5-yl)amino]propan-2-yl}oxy)propanoic acid, GLYCEROL, SULFATE ION, ...
Authors:Liu, H.
Deposit date:2022-11-05
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Discovery of Potent Small-Molecule Inhibitors of WDR5-MYC Interaction.
Acs Chem.Biol., 18, 2023
9LBZ
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BU of 9lbz by Molmil
unique-vertex of mature phage N4
Descriptor: 32 kDa protein, Major capsid protein, Probable portal protein
Authors:Liu, H, Chen, W.
Deposit date:2025-01-03
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (4 Å)
Cite:unique-vertex of mature phage N4
To Be Published
9LC0
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BU of 9lc0 by Molmil
tail complex of mature phage N4
Descriptor: 30 kDa protein, 60 kDa protein, Gp54, ...
Authors:Liu, H, Chen, W.
Deposit date:2025-01-03
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:tail complex of mature phage N4
To Be Published

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PDB entries from 2025-06-11

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