Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 373 results

2B5T
DownloadVisualize
BU of 2b5t by Molmil
2.1 Angstrom structure of a nonproductive complex between antithrombin, synthetic heparin mimetic SR123781 and two S195A thrombin molecules
Descriptor: 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose-(1-4)-2,3,6-tri-O-sulfo-alpha-D-glucopyranose-(1-4)-2,3,6-tri-O-sulfonato-beta-D-glucopyranose-(1-4)-2,3-di-O-methyl-6-O-sulfonato-alpha-D-glucopyranose-(1-4)-2,3,6-tri-O-methyl-beta-D-glucopyranose-(1-4)-2,3,6-tri-O-methyl-alpha-D-glucopyranose-(1-4)-2,3,6-tri-O-methyl-beta-D-glucopyranose-(1-4)-2,3,6-tri-O-methyl-alpha-D-glucopyranose-(1-4)-2,3,6-tri-O-methyl-beta-D-glucopyranose-(1-4)-2,3,6-tri-O-methyl-alpha-D-glucopyranose-(1-4)-2,3,6-tri-O-methyl-beta-D-glucopyranose-(1-4)-2,3-di-O-methyl-6-O-sulfonato-alpha-D-glucopyranose-(1-4)-2,3-di-O-methyl-beta-D-glucopyranuronic acid-(1-4)-2,3,6-tri-O-sulfo-alpha-D-glucopyranose-(1-4)-2,3-di-O-methyl-alpha-L-idopyranuronic acid-(1-4)-methyl 3-O-methyl-2,6-di-O-sulfo-alpha-D-glucopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Johnson, D.J, Li, W, Luis, S.A, Carrell, R.W, Huntington, J.A.
Deposit date:2005-09-29
Release date:2006-09-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of monomeric native antithrombin reveals a novel reactive center loop conformation.
J.Biol.Chem., 281, 2006
3D94
DownloadVisualize
BU of 3d94 by Molmil
Crystal structure of the insulin-like growth factor-1 receptor kinase in complex with PQIP
Descriptor: 3-[cis-3-(4-methylpiperazin-1-yl)cyclobutyl]-1-(2-phenylquinolin-7-yl)imidazo[1,5-a]pyrazin-8-amine, CALCIUM ION, Insulin-like growth factor 1 receptor beta chain
Authors:Wu, J, Li, W, Miller, W.T, Hubbard, S.R.
Deposit date:2008-05-26
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Small-molecule inhibition and activation-loop trans-phosphorylation of the IGF1 receptor
Embo J., 27, 2008
3RY0
DownloadVisualize
BU of 3ry0 by Molmil
Crystal structure of TomN, a 4-Oxalocrotonate Tautomerase homologue in Tomaymycin biosynthetic pathway
Descriptor: Putative tautomerase
Authors:Zhang, Y, Yan, W.P, Li, W.Z, Whitman, C.P.
Deposit date:2011-05-10
Release date:2011-08-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Kinetic, Crystallographic, and Mechanistic Characterization of TomN: Elucidation of a Function for a 4-Oxalocrotonate Tautomerase Homologue in the Tomaymycin Biosynthetic Pathway.
Biochemistry, 50, 2011
1ZN0
DownloadVisualize
BU of 1zn0 by Molmil
Coordinates of RRF and EF-G fitted into Cryo-EM map of the 50S subunit bound with both EF-G (GDPNP) and RRF
Descriptor: 16S RIBOSOMAL RNA, ELONGATION FACTOR G, Ribosome recycling factor
Authors:Gao, N, Zavialov, A.V, Li, W, Sengupta, J, Valle, M, Gursky, R.P, Ehrenberg, M, Frank, J.
Deposit date:2005-05-11
Release date:2005-06-14
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (15.5 Å)
Cite:Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies.
Mol.Cell, 18, 2005
1ZN1
DownloadVisualize
BU of 1zn1 by Molmil
Coordinates of RRF fitted into Cryo-EM map of the 70S post-termination complex
Descriptor: 30S ribosomal protein S12, Ribosome recycling factor, ribosomal 16S RNA, ...
Authors:Gao, N, Zavialov, A.V, Li, W, Sengupta, J, Valle, M, Gursky, R.P, Ehrenberg, M, Frank, J.
Deposit date:2005-05-11
Release date:2005-06-14
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (14.1 Å)
Cite:Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies.
Mol.Cell, 18, 2005
5DF6
DownloadVisualize
BU of 5df6 by Molmil
Crystal structure of PTPN11 tandem SH2 domains in complex with a TXNIP peptide
Descriptor: Tyrosine-protein phosphatase non-receptor type 11, UNKNOWN ATOM OR ION, txnip
Authors:Dong, A, Li, W, Tempel, W, Liu, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2015-08-26
Release date:2015-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural basis for the regulatory role of the PPxY motifs in the thioredoxin-interacting protein TXNIP.
Biochem.J., 473, 2016
8X19
DownloadVisualize
BU of 8x19 by Molmil
Structure of nucleosome-bound SRCAP-C in the ADP-BeFx-bound state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
Authors:Yu, J, Wang, Q, Yu, Z, Li, W, Wang, L, Xu, Y.
Deposit date:2023-11-06
Release date:2024-03-06
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into histone exchange by human SRCAP complex.
Cell Discov, 10, 2024
8JHG
DownloadVisualize
BU of 8jhg by Molmil
Native SUV420H1 bound to 167-bp nucleosome
Descriptor: DNA (160-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Lin, F, Li, W.
Deposit date:2023-05-23
Release date:2023-11-22
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Structural basis of nucleosomal H4K20 recognition and methylation by SUV420H1 methyltransferase.
Cell Discov, 9, 2023
8JHF
DownloadVisualize
BU of 8jhf by Molmil
Native SUV420H1 bound to 167-bp nucleosome
Descriptor: DNA (160-MER), Histone H2A.Z, Histone H2B type 1-K, ...
Authors:Lin, F, Li, W.
Deposit date:2023-05-23
Release date:2023-11-15
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Structural basis of nucleosomal H4K20 recognition and methylation by SUV420H1 methyltransferase.
Cell Discov, 9, 2023
8X1C
DownloadVisualize
BU of 8x1c by Molmil
Structure of nucleosome-bound SRCAP-C in the ADP-bound state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
Authors:Yu, J, Wang, Q, Yu, Z, Li, W, Wang, L, Xu, Y.
Deposit date:2023-11-06
Release date:2024-03-06
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into histone exchange by human SRCAP complex.
Cell Discov, 10, 2024
8X15
DownloadVisualize
BU of 8x15 by Molmil
Structure of nucleosome-bound SRCAP-C in the apo state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
Authors:Yu, J, Wang, Q, Yu, Z, Li, W, Wang, L, Xu, Y.
Deposit date:2023-11-06
Release date:2024-03-06
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into histone exchange by human SRCAP complex.
Cell Discov, 10, 2024
7MJG
DownloadVisualize
BU of 7mjg by Molmil
Cryo-EM structure of the SARS-CoV-2 N501Y mutant spike protein ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Zhu, X, Mannar, D, Srivastava, S.S, Berezuk, A.M, Demers, J.P, Saville, J.W, Leopold, K, Li, W, Dimitrov, D.S, Tuttle, K.S, Zhou, S, Chittori, S, Subramaniam, S.
Deposit date:2021-04-20
Release date:2021-05-12
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Cryo-electron microscopy structures of the N501Y SARS-CoV-2 spike protein in complex with ACE2 and 2 potent neutralizing antibodies.
Plos Biol., 19, 2021
2K4U
DownloadVisualize
BU of 2k4u by Molmil
Solution structure of the SCORPION TOXIN ADWX-1
Descriptor: Potassium channel toxin alpha-KTx 3.6
Authors:Yin, S.J, Jiang, L, Yi, H, Han, S, Yang, D.W, Liu, M.L, Liu, H, Cao, Z.J, Wu, Y.L, Li, W.X.
Deposit date:2008-06-18
Release date:2008-12-09
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Different Residues in Channel Turret Determining the Selectivity of ADWX-1 Inhibitor Peptide between Kv1.1 and Kv1.3 Channels
J.Proteome Res., 7, 2008
8TGH
DownloadVisualize
BU of 8tgh by Molmil
VMAT1 dimer with amphetamine and reserpine
Descriptor: (2S)-1-phenylpropan-2-amine, Chromaffin granule amine transporter, reserpine
Authors:Ye, J, Liu, B, Li, W.
Deposit date:2023-07-12
Release date:2024-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGJ
DownloadVisualize
BU of 8tgj by Molmil
VMAT1 dimer in unbound form and with reserpine
Descriptor: VMAT1 dimer in unbound form and with reserpine, reserpine
Authors:Ye, J, Liu, B, Li, W.
Deposit date:2023-07-12
Release date:2024-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGG
DownloadVisualize
BU of 8tgg by Molmil
VMAT1 dimer with MPP+ and reserpine
Descriptor: 1-methyl-4-phenylpyridin-1-ium, Chromaffin granule amine transporter, reserpine
Authors:Ye, J, Liu, B, Li, W.
Deposit date:2023-07-12
Release date:2024-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGI
DownloadVisualize
BU of 8tgi by Molmil
VMAT1 dimer with dopamine and reserpine
Descriptor: Chromaffin granule amine transporter, L-DOPAMINE, reserpine
Authors:Ye, J, Liu, B, Li, W.
Deposit date:2023-07-12
Release date:2024-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGL
DownloadVisualize
BU of 8tgl by Molmil
VMAT1 dimer with norepinephrine and reserpine
Descriptor: Chromaffin granule amine transporter, L-NOREPINEPHRINE, reserpine
Authors:Ye, J, Liu, B, Li, W.
Deposit date:2023-07-12
Release date:2024-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGM
DownloadVisualize
BU of 8tgm by Molmil
VMAT1 dimer with reserpine
Descriptor: VMAT1 dimer with reserpine, reserpine
Authors:Ye, J, Liu, B, Li, W.
Deposit date:2023-07-12
Release date:2024-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGN
DownloadVisualize
BU of 8tgn by Molmil
VMAT1 dimer with serotonin and reserpine
Descriptor: Chromaffin granule amine transporter, SEROTONIN, reserpine
Authors:Ye, J, Liu, B, Li, W.
Deposit date:2023-07-12
Release date:2024-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGK
DownloadVisualize
BU of 8tgk by Molmil
VMAT1 dimer with histamine and reserpine
Descriptor: Chromaffin granule amine transporter, HISTAMINE, reserpine
Authors:Ye, J, Liu, B, Li, W.
Deposit date:2023-07-12
Release date:2024-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
1P6B
DownloadVisualize
BU of 1p6b by Molmil
X-ray structure of phosphotriesterase, triple mutant H254G/H257W/L303T
Descriptor: DIETHYL 4-METHYLBENZYLPHOSPHONATE, ETHYL DIHYDROGEN PHOSPHATE, Parathion hydrolase, ...
Authors:Hill, C.M, Li, W, Thoden, J.B, Holden, H.M, Raushel, F.M.
Deposit date:2003-04-29
Release date:2003-09-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Enhanced degradation of chemical warfare agents through molecular engineering of the phosphotriesterase active site.
J.Am.Chem.Soc., 125, 2003
1P6C
DownloadVisualize
BU of 1p6c by Molmil
crystal structure of phosphotriesterase triple mutant H254G/H257W/L303T complexed with diisopropylmethylphosphonate
Descriptor: DIETHYL 4-METHYLBENZYLPHOSPHONATE, METHYLPHOSPHONIC ACID DIISOPROPYL ESTER, Parathion hydrolase, ...
Authors:Hill, C.M, Li, W, Thoden, J.B, Holden, H.M, Raushel, F.M.
Deposit date:2003-04-29
Release date:2003-09-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Enhanced degradation of chemical warfare agents through molecular engineering of the phosphotriesterase active site.
J.Am.Chem.Soc., 125, 2003
6Q04
DownloadVisualize
BU of 6q04 by Molmil
MERS-CoV S structure in complex with 5-N-acetyl neuraminic acid
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FOLIC ACID, ...
Authors:Park, Y.J, Walls, A.C, Wang, Z, Sauer, M, Li, W, Tortorici, M.A, Bosch, B.J, DiMaio, F.D, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-08-01
Release date:2019-12-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structures of MERS-CoV spike glycoprotein in complex with sialoside attachment receptors.
Nat.Struct.Mol.Biol., 26, 2019
6Q06
DownloadVisualize
BU of 6q06 by Molmil
MERS-CoV S structure in complex with 2,3-sialyl-N-acetyl-lactosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FOLIC ACID, ...
Authors:Park, Y.J, Walls, A.C, Wang, Z, Sauer, M, Li, W, Tortorici, M.A, Bosch, B.J, DiMaio, F.D, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-08-01
Release date:2019-12-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structures of MERS-CoV spike glycoprotein in complex with sialoside attachment receptors.
Nat.Struct.Mol.Biol., 26, 2019

220472

数据于2024-05-29公开中

PDB statisticsPDBj update infoContact PDBjnumon