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PDB: 643 results

5FYN
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BU of 5fyn by Molmil
Sub-tomogram averaging of Tula virus glycoprotein spike
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PUUMALA VIRUS GN GLYCOPROTEIN, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, S, Rissanen, I, Zeltina, A, Hepojoki, J, Raghwani, J, Harlos, K, Pybus, O.G, Huiskonen, J.T, Bowden, T.A.
Deposit date:2016-03-08
Release date:2016-06-08
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (15.6 Å)
Cite:A Molecular-Level Account of the Antigenic Hantaviral Surface.
Cell Rep., 15, 2016
7CAL
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BU of 7cal by Molmil
Cryo-EM Structure of the Hyperpolarization-Activated Inwardly Rectifying Potassium Channel KAT1 from Arabidopsis
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Potassium channel KAT1
Authors:Li, S.Y, Yang, F, Sun, D.M, Zhang, Y, Zhang, M.G, Zhou, P, Liu, S.L, Zhang, Y.N, Zhang, L.H, Tian, C.L.
Deposit date:2020-06-09
Release date:2020-07-29
Last modified:2020-11-18
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of the hyperpolarization-activated inwardly rectifying potassium channel KAT1 from Arabidopsis.
Cell Res., 30, 2020
1LPL
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BU of 1lpl by Molmil
Structural Genomics of Caenorhabditis elegans: CAP-Gly domain of F53F4.3
Descriptor: Hypothetical 25.4 kDa protein F53F4.3 in chromosome V
Authors:Li, S, Finley, J, Liu, Z.-J, Qiu, S.H, Luan, C.H, Carson, M, Tsao, J, Johnson, D, Lin, G, Zhao, J, Thomas, W, Nagy, L.A, Sha, B, DeLucas, L.J, Wang, B.-C, Luo, M, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2002-05-08
Release date:2002-05-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal Structure of the Cytoskeleton-associated Protein Glycine-rich (CAP-Gly) Domain
J.Biol.Chem., 277, 2002
1F9G
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BU of 1f9g by Molmil
CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE HYALURONATE LYASE COCRYSTALLIZED WITH ASCORBIC ACID
Descriptor: ASCORBIC ACID, HYALURONATE LYASE
Authors:Li, S, Jedrzejas, M.J.
Deposit date:2000-07-10
Release date:2001-05-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Vitamin C inhibits the enzymatic activity of Streptococcus pneumoniae hyaluronate lyase.
J.Biol.Chem., 276, 2001
7CQI
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BU of 7cqi by Molmil
Cryo-EM structure of the substrate-bound SPT-ORMDL3 complex
Descriptor: ORM1-like protein 3, Serine palmitoyltransferase 1, Serine palmitoyltransferase 2, ...
Authors:Li, S.S, Xie, T, Wang, L, Gong, X.
Deposit date:2020-08-11
Release date:2021-02-10
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into the assembly and substrate selectivity of human SPT-ORMDL3 complex.
Nat.Struct.Mol.Biol., 28, 2021
7CQK
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BU of 7cqk by Molmil
Cryo-EM structure of the substrate-bound SPT-ORMDL3 complex
Descriptor: ORM1-like protein 3, Serine palmitoyltransferase 1, Serine palmitoyltransferase 2, ...
Authors:Li, S.S, Xie, T, Wang, L, Gong, X.
Deposit date:2020-08-11
Release date:2021-02-10
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into the assembly and substrate selectivity of human SPT-ORMDL3 complex.
Nat.Struct.Mol.Biol., 28, 2021
7XSN
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BU of 7xsn by Molmil
Native Tetrahymena ribozyme conformation
Descriptor: RNA (387-MER)
Authors:Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
Deposit date:2022-05-14
Release date:2022-08-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XSL
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BU of 7xsl by Molmil
Misfolded Tetrahymena ribozyme conformation 2
Descriptor: RNA (388-MER)
Authors:Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
Deposit date:2022-05-14
Release date:2022-08-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XSM
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BU of 7xsm by Molmil
Misfolded Tetrahymena ribozyme conformation 3
Descriptor: RNA (388-MER)
Authors:Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
Deposit date:2022-05-14
Release date:2022-08-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (4.01 Å)
Cite:Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XSK
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BU of 7xsk by Molmil
Misfolded Tetrahymena ribozyme conformation 1
Descriptor: RNA (388-MER)
Authors:Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
Deposit date:2022-05-14
Release date:2022-08-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
5IW5
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BU of 5iw5 by Molmil
Crystal structure of E. coli NudC in complex with NMN
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NADH pyrophosphatase, ZINC ION
Authors:Li, S, Du, J, Patel, D.J.
Deposit date:2016-03-22
Release date:2016-07-13
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and function of the bacterial decapping enzyme NudC
Nat.Chem.Biol., 12, 2016
5IW4
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BU of 5iw4 by Molmil
Crystal structure of E. coli NudC in complex with NAD
Descriptor: NADH pyrophosphatase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Li, S, Du, J, Patel, D.J.
Deposit date:2016-03-22
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and function of the bacterial decapping enzyme NudC.
Nat.Chem.Biol., 12, 2016
1R9H
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BU of 1r9h by Molmil
Structural Genomics of C.elegans: FKBP-type Peptidylprolyl Isomerase
Descriptor: FK506 Binding protein family
Authors:Li, S, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2003-10-29
Release date:2003-12-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Genomics of C.elegans: FKBP-type Peptidylprolyl Isomerase
To be Published
6M4O
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BU of 6m4o by Molmil
Cryo-EM structure of the monomeric SPT-ORMDL3 complex
Descriptor: ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ...
Authors:Li, S.S, Xie, T, Wang, L, Gong, X.
Deposit date:2020-03-08
Release date:2021-02-10
Last modified:2021-03-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into the assembly and substrate selectivity of human SPT-ORMDL3 complex.
Nat.Struct.Mol.Biol., 28, 2021
7YGB
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BU of 7ygb by Molmil
Cryo-EM structure of Tetrahymena ribozyme conformation 3 undergoing the second-step self-splicing
Descriptor: MAGNESIUM ION, RNA (393-MER), RNA (5'-R(*CP*CP*CP*UP*CP*UP*UP*AP*AP*CP*C)-3'), ...
Authors:Li, S, Michael, Z.P, Zhang, X, Greg, P, Zhang, K.
Deposit date:2022-07-11
Release date:2023-03-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.62 Å)
Cite:Snapshots of the second-step self-splicing of Tetrahymena ribozyme revealed by cryo-EM.
Nat Commun, 14, 2023
7DBL
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BU of 7dbl by Molmil
Acyl-CoA hydrolase MpaH' mutant S139A in complex with MPA
Descriptor: MYCOPHENOLIC ACID, acyl-CoA hydrolase MpaH'
Authors:Li, S.Y, You, C.
Deposit date:2020-10-20
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural basis for substrate specificity of the peroxisomal acyl-CoA hydrolase MpaH' involved in mycophenolic acid biosynthesis.
Febs J., 288, 2021
7XML
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BU of 7xml by Molmil
Cryo-EM structure of PEIP-Bs_enolase complex
Descriptor: Enolase, MAGNESIUM ION, Putative gene 60 protein
Authors:Li, S, Zhang, K.
Deposit date:2022-04-26
Release date:2022-07-27
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Bacteriophage protein PEIP is a potent Bacillus subtilis enolase inhibitor.
Cell Rep, 40, 2022
3ZSN
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BU of 3zsn by Molmil
Structure of the mixed-function P450 MycG F286A mutant in complex with mycinamicin IV
Descriptor: BENZAMIDINE, GLYCEROL, MYCINAMICIN IV, ...
Authors:Li, S, Kells, P.M, Rutaganira, F.U, Anzai, Y, Kato, F, Sherman, D.H, Podust, L.M.
Deposit date:2011-06-29
Release date:2012-05-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Substrate Recognition by the Multifunctional Cytochrome P450 Mycg in Mycinamicin Hydroxylation and Epoxidation Reactions.
J.Biol.Chem., 287, 2012
4AW3
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BU of 4aw3 by Molmil
Structure of the mixed-function P450 MycG F286V mutant in complex with mycinamicin V in P1 space group
Descriptor: GLYCEROL, MYCINAMICIN V, P-450-LIKE PROTEIN, ...
Authors:Li, S, Tietz, D.R, Rutaganira, F.U, Kells, P.M, Anzai, Y, Kato, F, Pochapsky, T.C, Sherman, D.H, Podust, L.M.
Deposit date:2012-05-30
Release date:2012-09-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Substrate Recognition by the Multifunctional Cytochrome P450 Mycg in Mycinamicin Hydroxylation and Epoxidation Reactions.
J.Biol.Chem., 287, 2012
2H06
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BU of 2h06 by Molmil
Crystal structure of human phosphoribosyl pyrophosphate synthetase 1
Descriptor: Ribose-phosphate pyrophosphokinase I, SULFATE ION
Authors:Li, S, Peng, B, Ding, J.
Deposit date:2006-05-14
Release date:2006-10-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of human phosphoribosylpyrophosphate synthetase 1 reveals a novel allosteric site
Biochem.J., 401, 2007
4ORA
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BU of 4ora by Molmil
Crystal structure of a human calcineurin mutant
Descriptor: CALCIUM ION, Calcineurin subunit B type 1, FE (III) ION, ...
Authors:Li, S.J, Wang, J, Wu, J.W, Wang, Z.X.
Deposit date:2014-02-11
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.747 Å)
Cite:Cooperative autoinhibition and multi-level activation mechanisms of calcineurin
To be Published
2H07
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BU of 2h07 by Molmil
crystal structure of human phosphoribosyl pyrophosphate synthetase 1 mutant S132A
Descriptor: Ribose-phosphate pyrophosphokinase I, SULFATE ION
Authors:Li, S, Peng, B, Ding, J.
Deposit date:2006-05-14
Release date:2006-10-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of human phosphoribosylpyrophosphate synthetase 1 reveals a novel allosteric site
Biochem.J., 401, 2007
2H08
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BU of 2h08 by Molmil
crystal structure of human phosphoribosyl pyrophosphate synthetase 1 mutant Y146M
Descriptor: Ribose-phosphate pyrophosphokinase I, SULFATE ION
Authors:Li, S, Peng, B, Ding, J.
Deposit date:2006-05-14
Release date:2006-10-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of human phosphoribosylpyrophosphate synthetase 1 reveals a novel allosteric site
Biochem.J., 401, 2007
3EPO
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BU of 3epo by Molmil
Crystal structure of Caulobacter crescentus ThiC complexed with HMP-P
Descriptor: (4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL DIHYDROGEN PHOSPHATE, Thiamine biosynthesis protein thiC
Authors:Li, S, Chatterjee, A, Zhang, Y, Grove, T.L, Lee, M, Krebs, C, Booker, S.J, Begley, T.P, Ealick, S.E.
Deposit date:2008-09-29
Release date:2008-10-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Reconstitution of ThiC in thiamine pyrimidine biosynthesis expands the radical SAM superfamily
Nat.Chem.Biol., 4, 2008
2NMB
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BU of 2nmb by Molmil
DNUMB PTB DOMAIN COMPLEXED WITH A PHOSPHOTYROSINE PEPTIDE, NMR, ENSEMBLE OF STRUCTURES.
Descriptor: PROTEIN (GPPY PEPTIDE), PROTEIN (NUMB PROTEIN)
Authors:Li, S.-C, Zwahlen, C, Vincent, S.J.F, McGlade, C.J, Pawson, T, Forman-Kay, J.D.
Deposit date:1998-10-29
Release date:1998-11-04
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Structure of a Numb PTB domain-peptide complex suggests a basis for diverse binding specificity.
Nat.Struct.Biol., 5, 1998

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