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PDB: 248 results

7SFS
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BU of 7sfs by Molmil
In situ cryo-EM structure of bacteriophage Sf6 portal:gp7 complex at 2.7A resolution
Descriptor: Gene 3 protein, Gene 7 protein
Authors:Li, F, Cingolani, G, Hou, C.
Deposit date:2021-10-04
Release date:2022-11-09
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:High-resolution cryo-EM structure of the Shigella virus Sf6 genome delivery tail machine.
Sci Adv, 8, 2022
7SG7
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BU of 7sg7 by Molmil
In situ cryo-EM structure of bacteriophage Sf6 gp8:gp14N complex at 2.8 A resolution
Descriptor: Gene 14 protein, Gene 8 protein
Authors:Li, F, Cingolani, G, Hou, C.
Deposit date:2021-10-05
Release date:2022-11-09
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:High-resolution cryo-EM structure of the Shigella virus Sf6 genome delivery tail machine.
Sci Adv, 8, 2022
7SP4
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BU of 7sp4 by Molmil
In situ cryo-EM structure of bacteriophage Sf6 gp3:gp7:gp5 complex in conformation 2 at 3.71A resolution
Descriptor: Gene 3 protein, Gene 5 protein, Gene 7 protein
Authors:Li, F, Cingolani, G, Hou, C, Yang, R.
Deposit date:2021-11-02
Release date:2022-11-09
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:High-resolution cryo-EM structure of the Shigella virus Sf6 genome delivery tail machine.
Sci Adv, 8, 2022
7SPU
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BU of 7spu by Molmil
In situ cryo-EM structure of bacteriophage Sf6 gp3:gp7:gp5 complex in conformation 1 at 3.73A resolution
Descriptor: Gene 3 protein, Gene 5 protein, Gene 7 protein
Authors:Li, F, Cingolani, G, Hou, C, Yang, R.
Deposit date:2021-11-03
Release date:2022-11-23
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:High-resolution cryo-EM structure of the Shigella virus Sf6 genome delivery tail machine.
Sci Adv, 8, 2022
7T3N
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BU of 7t3n by Molmil
R184Q/E191Q mutant of rat vesicular glutamate transporter 2 (VGLUT2)
Descriptor: (1S,3R)-1-AMINOCYCLOPENTANE-1,3-DICARBOXYLIC ACID, (2R)-2-(methoxymethyl)-4-{[(25R)-spirost-5-en-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, Vesicular glutamate transporter 2
Authors:Li, F, Stroud, R.M, Edwards, R.H.
Deposit date:2021-12-08
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Substrate Recognition, Directional Flux, and Allostery in a Synaptic Vesicle Glutamate Transporter
To Be Published
7T3O
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BU of 7t3o by Molmil
Rat vesicular glutamate transporter 2 (VGLUT2) in low Cl condition
Descriptor: Vesicular glutamate transporter 2
Authors:Li, F, Stroud, R.M, Edwards, R.H.
Deposit date:2021-12-08
Release date:2022-12-14
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Substrate Recognition, Directional Flux, and Allostery in a Synaptic Vesicle Glutamate Transporter
To Be Published
1MIY
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BU of 1miy by Molmil
Crystal structure of Bacillus stearothermophilus CCA-adding enzyme in complex with CTP
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, tRNA CCA-adding enzyme
Authors:Li, F, Xiong, Y, Wang, J, Cho, H.D, Weiner, A.M, Steitz, T.A.
Deposit date:2002-08-23
Release date:2002-12-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.52 Å)
Cite:Crystal structures of the Bacillus stearothermophilus CCA-adding enzyme and its complexes with ATP or CTP
Cell(Cambridge,Mass.), 111, 2002
2Q1O
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BU of 2q1o by Molmil
Crystal Structure Analysis of the RNA Dodecamer CGC-NF2-AAUUGGCG, with an Incorporated 2,4-Difluorotoluyl Residue (NF2)
Descriptor: RNA (5'-R(*CP*GP*CP*(NF2)P*AP*AP*UP*UP*GP*GP*CP*G)-3')
Authors:Li, F, Pallan, P.S.
Deposit date:2007-05-25
Release date:2007-10-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure, stability and in vitro RNAi activity of oligoribonucleotides containing the ribo-difluorotoluyl nucleotide: insights into substrate requirements by the human RISC Ago2 enzyme.
Nucleic Acids Res., 35, 2007
2Q1R
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BU of 2q1r by Molmil
Crystal Structure Analysis of the RNA Dodecamer CGCGAAUUAGCG, with a G-A mismatch.
Descriptor: MAGNESIUM ION, RNA (5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*AP*GP*CP*G)-3')
Authors:Li, F, Pallan, P.S.
Deposit date:2007-05-25
Release date:2007-10-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Crystal structure, stability and in vitro RNAi activity of oligoribonucleotides containing the ribo-difluorotoluyl nucleotide: insights into substrate requirements by the human RISC Ago2 enzyme.
Nucleic Acids Res., 35, 2007
3D0I
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BU of 3d0i by Molmil
Crystal structure of spike protein receptor-binding domain from the 2005-2006 SARS coronavirus civet strain complexed with human-civet chimeric receptor ACE2
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Li, F.
Deposit date:2008-05-01
Release date:2008-07-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural analysis of major species barriers between humans and palm civets for severe acute respiratory syndrome coronavirus infections
J.Virol., 82, 2008
3D0G
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BU of 3d0g by Molmil
Crystal structure of spike protein receptor-binding domain from the 2002-2003 SARS coronavirus human strain complexed with human-civet chimeric receptor ACE2
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Li, F.
Deposit date:2008-05-01
Release date:2008-07-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural analysis of major species barriers between humans and palm civets for severe acute respiratory syndrome coronavirus infections
J.Virol., 82, 2008
4RZF
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BU of 4rzf by Molmil
Crystal Structure Analysis of the NUR77 Ligand Binding Domain, S441W mutant
Descriptor: GLYCEROL, Nuclear receptor subfamily 4 group A member 1
Authors:Li, F, Tian, X, Li, A, Li, L, Liu, Y, Chen, H, Wu, Q, Lin, T.
Deposit date:2014-12-21
Release date:2015-03-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Impeding the interaction between Nur77 and p38 reduces LPS-induced inflammation.
Nat.Chem.Biol., 11, 2015
7CNC
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BU of 7cnc by Molmil
cystal structure of human ERH in complex with DGCR8
Descriptor: Enhancer of rudimentary homolog, Microprocessor complex subunit DGCR8
Authors:Li, F, Shen, S.
Deposit date:2020-07-30
Release date:2020-10-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:ERH facilitates microRNA maturation through the interaction with the N-terminus of DGCR8.
Nucleic Acids Res., 48, 2020
2AJF
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BU of 2ajf by Molmil
Structure of SARS coronavirus spike receptor-binding domain complexed with its receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme-Related Carboxypeptidase (Ace2), CHLORIDE ION, ...
Authors:Li, F, Li, W, Farzan, M, Harrison, S.C.
Deposit date:2005-08-01
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of SARS coronavirus spike receptor-binding domain complexed with receptor.
Science, 309, 2005
4RZG
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BU of 4rzg by Molmil
Crystal Structure Analysis of the DNPA-bounded NUR77 Ligand binding Domain
Descriptor: GLYCEROL, Nuclear receptor subfamily 4 group A member 1, pentyl (3,5-dihydroxy-2-nonanoylphenyl)acetate
Authors:Li, F, Tian, X, Li, A, Li, L, Liu, Y, Chen, H, Wu, Q, Lin, T.
Deposit date:2014-12-21
Release date:2015-03-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Impeding the interaction between Nur77 and p38 reduces LPS-induced inflammation.
Nat.Chem.Biol., 11, 2015
4ROU
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BU of 4rou by Molmil
Auto-inhibition Mechanism of Human Mitochondrial RNase P Protein Complex
Descriptor: CHLORIDE ION, Mitochondrial ribonuclease P protein 3, ZINC ION
Authors:Li, F, Liu, X, Yang, X, Shen, Y.
Deposit date:2014-10-29
Release date:2015-11-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.713 Å)
Cite:Auto-inhibition Mechanism of Human Mitochondrial RNase P Protein Complex
TO BE PUBLISHED
8SBE
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BU of 8sbe by Molmil
Structure of the rat vesicular glutamate transporter 2 determined by single-particle Cryo-EM
Descriptor: Vesicular glutamate transporter 2
Authors:Li, F, Finer-Moore, J, Eriksen, J, Cheng, Y, Edwards, R, Stroud, R.
Deposit date:2023-04-03
Release date:2023-05-03
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Ion transport and regulation in a synaptic vesicle glutamate transporter.
Science, 368, 2020
8VLG
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BU of 8vlg by Molmil
Cryo-EM structure of human HGSNAT bound with Acetyl-CoA and substrate analog
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-methyl-2-oxo-2H-1-benzopyran-7-yl 2-amino-2-deoxy-beta-D-glucopyranoside, ...
Authors:Li, F, Zhao, B.
Deposit date:2024-01-11
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structural and mechanistic insights into a lysosomal membrane enzyme HGSNAT involved in Sanfilippo syndrome
To Be Published
8VLY
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BU of 8vly by Molmil
Cryo-EM structure of human HGSNAT in transition state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heparan-alpha-glucosaminide N-acetyltransferase
Authors:Li, F, Zhao, B.
Deposit date:2024-01-12
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:Structural and mechanistic insights into a lysosomal membrane enzyme HGSNAT involved in Sanfilippo syndrome
To Be Published
8VLU
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BU of 8vlu by Molmil
Cryo-EM structure of human HGSNAT bound with CoA
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, COENZYME A, Heparan-alpha-glucosaminide N-acetyltransferase
Authors:Li, F, Zhao, B.
Deposit date:2024-01-12
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Structural and mechanistic insights into a lysosomal membrane enzyme HGSNAT involved in Sanfilippo syndrome
To Be Published
8VKJ
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BU of 8vkj by Molmil
Cryo-EM structure of human HGSNAT bound with Acetyl-CoA
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYL COENZYME *A, ...
Authors:Li, F, Zhao, B.
Deposit date:2024-01-09
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Structural and mechanistic insights into a lysosomal membrane enzyme HGSNAT involved in Sanfilippo syndrome
To Be Published
8VLV
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BU of 8vlv by Molmil
Cryo-EM structure of human HGSNAT in inactive state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heparan-alpha-glucosaminide N-acetyltransferase
Authors:Li, F.
Deposit date:2024-01-12
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Structural and mechanistic insights into a lysosomal membrane enzyme HGSNAT involved in Sanfilippo syndrome
To Be Published
8VLI
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BU of 8vli by Molmil
Cryo-EM structure of human HGSNAT bound with CoA and product analog
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-methyl-2-oxo-2H-1-benzopyran-7-yl 2-acetamido-2-deoxy-beta-D-glucopyranoside, ...
Authors:Li, F, Zhao, B.
Deposit date:2024-01-11
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural and mechanistic insights into a lysosomal membrane enzyme HGSNAT involved in Sanfilippo syndrome
To Be Published
6MDW
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BU of 6mdw by Molmil
Mechanism of protease dependent DPC repair
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, CITRATE ANION, ...
Authors:Li, F, Raczynska, J, Chen, Z, Yu, H.
Deposit date:2018-09-05
Release date:2019-04-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Insight into DNA-Dependent Activation of Human Metalloprotease Spartan.
Cell Rep, 26, 2019
6AKJ
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BU of 6akj by Molmil
The crystal structure of EMC complex
Descriptor: Enhancer of rudimentary homolog,YTH domain-containing protein mmi1 fusion protein, SULFATE ION
Authors:Li, F.
Deposit date:2018-09-01
Release date:2019-02-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A conserved dimer interface connects ERH and YTH family proteins to promote gene silencing.
Nat Commun, 10, 2019

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PDB entries from 2024-08-21

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