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PDB: 523 results

5JB1
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BU of 5jb1 by Molmil
Pseudo-atomic structure of Human Papillomavirus Type 59 L1 Virus-like Particle
Descriptor: Major capsid protein L1
Authors:Li, Z.H, Yan, X.D, Yu, H, Zheng, Q.B, Gu, Y, Li, S.W.
Deposit date:2016-04-13
Release date:2016-05-18
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (6 Å)
Cite:The C-Terminal Arm of the Human Papillomavirus Major Capsid Protein Is Immunogenic and Involved in Virus-Host Interaction.
Structure, 24, 2016
5J6R
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BU of 5j6r by Molmil
Crystal structure of Human Papillomavirus Type 59 L1 pentamer
Descriptor: Major capsid protein L1
Authors:Li, Z.H, Yan, X.D, Yu, H, Gu, Y, Li, S.W.
Deposit date:2016-04-05
Release date:2016-05-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (4.011 Å)
Cite:The C-Terminal Arm of the Human Papillomavirus Major Capsid Protein Is Immunogenic and Involved in Virus-Host Interaction.
Structure, 24, 2016
5XJ5
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BU of 5xj5 by Molmil
Crystal structure of PlsY (YgiH), an integral membrane glycerol 3-phosphate acyltransferase - the monoacylglycerol form
Descriptor: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, GLYCINE, Glycerol-3-phosphate acyltransferase, ...
Authors:Li, Z, Li, D.
Deposit date:2017-04-30
Release date:2017-12-06
Method:X-RAY DIFFRACTION (1.481 Å)
Cite:Structural insights into the committed step of bacterial phospholipid biosynthesis.
Nat Commun, 8, 2017
5XJ9
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BU of 5xj9 by Molmil
Crystal structure of PlsY (YgiH), an integral membrane glycerol 3-phosphate acyltransferase - the orthophosphate form
Descriptor: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, Glycerol-3-phosphate acyltransferase, PHOSPHATE ION
Authors:Li, Z, Tang, Y, Li, D.
Deposit date:2017-04-30
Release date:2017-12-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural insights into the committed step of bacterial phospholipid biosynthesis.
Nat Commun, 8, 2017
5JJO
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BU of 5jjo by Molmil
The crystal structure of immunity protein PA5088 from Pseudomonas aeruginosa
Descriptor: GOLD ION, Uncharacterized protein
Authors:Li, Z.Q, Gao, Z.Q, She, Z, Dong, Y.H.
Deposit date:2016-04-24
Release date:2016-08-31
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structural analysis of Pseudomonas aeruginosa H3-T6SS immunity proteins
Febs Lett., 590, 2016
3KYS
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BU of 3kys by Molmil
Crystal structure of human YAP and TEAD complex
Descriptor: 65 kDa Yes-associated protein, Transcriptional enhancer factor TEF-1
Authors:Li, Z, Zhao, B, Wang, P, Chen, F, Dong, Z, Yang, H, Guan, K.L, Xu, Y.
Deposit date:2009-12-07
Release date:2010-02-23
Last modified:2020-10-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the YAP and TEAD complex
Genes Dev., 24, 2010
8WWW
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BU of 8www by Molmil
Crystal structure of the adenylation domain of SyAstC
Descriptor: Carrier domain-containing protein, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Li, Z, Zhu, Z, Zhu, D, Shen, Y.
Deposit date:2023-10-27
Release date:2024-06-05
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Functional Application of the Single-Module NRPS-like d-Alanyltransferase in Maytansinol Biosynthesis
Acs Catalysis, 14, 2024
5JFK
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BU of 5jfk by Molmil
Crystal structure of a TDR receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich repeat receptor-like protein kinase TDR
Authors:Li, Z, Xu, G.
Deposit date:2016-04-19
Release date:2017-03-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.647 Å)
Cite:Crystal structure of a TDR receptor
To Be Published
4ETZ
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BU of 4etz by Molmil
Crystal Structure of PelD 158-CT from Pseudomonas aeruginosa PAO1
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), PelD
Authors:Li, Z, Chen, J, Nair, S.K.
Deposit date:2012-04-24
Release date:2012-07-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structures of the PelD Cyclic Diguanylate Effector Involved in Pellicle Formation in Pseudomonas aeruginosa PAO1.
J.Biol.Chem., 287, 2012
8W9P
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BU of 8w9p by Molmil
Structure of full Banna virus
Descriptor: VP10, VP2, VP4, ...
Authors:Li, Z, Cao, S.
Deposit date:2023-09-05
Release date:2024-03-27
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:Cryo-EM structures of Banna virus in multiple states reveal stepwise detachment of viral spikes.
Nat Commun, 15, 2024
8W9Q
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BU of 8w9q by Molmil
Structure of partial Banna virus
Descriptor: VP10, VP2, VP4, ...
Authors:Li, Z, Cao, S.
Deposit date:2023-09-05
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:Cryo-EM structures of Banna virus in multiple states reveal stepwise detachment of viral spikes.
Nat Commun, 15, 2024
8W9R
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BU of 8w9r by Molmil
Structure of Banna virus core
Descriptor: VP10, VP8, Vp2
Authors:Li, Z, Cao, S.
Deposit date:2023-09-05
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cryo-EM structures of Banna virus in multiple states reveal stepwise detachment of viral spikes.
Nat Commun, 15, 2024
7C23
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BU of 7c23 by Molmil
Crystal structure of CrmE10, a SGNH-hydrolase family esterase
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Li, Z, Li, J.
Deposit date:2020-05-07
Release date:2020-05-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-guided protein engineering increases enzymatic activities of the SGNH family esterases.
Biotechnol Biofuels, 13, 2020
8HEX
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BU of 8hex by Molmil
C5 portal vertex in HCMV B-capsid
Descriptor: Capsid vertex component 1, Capsid vertex component 2, Major capsid protein, ...
Authors:Li, Z, Yu, X.
Deposit date:2022-11-08
Release date:2023-11-01
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-electron microscopy structures of capsids and in situ portals of DNA-devoid capsids of human cytomegalovirus.
Nat Commun, 14, 2023
8HEY
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BU of 8hey by Molmil
One CVSC-binding penton vertex in HCMV B-capsid
Descriptor: Capsid vertex component 1, Capsid vertex component 2, Major capsid protein, ...
Authors:Li, Z, Yu, X.
Deposit date:2022-11-09
Release date:2023-11-01
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-electron microscopy structures of capsids and in situ portals of DNA-devoid capsids of human cytomegalovirus.
Nat Commun, 14, 2023
6LBE
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BU of 6lbe by Molmil
Crystal structure of bony fish MHC class I binding beta2M-2 for 2.6 angstrom
Descriptor: 9-mer peptide from RNA-DIRECTED RNA POLYMERASE L, Beta-2-microglobulin, MHC class I antigen
Authors:Li, Z.B, Xia, C.
Deposit date:2019-11-14
Release date:2020-11-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Mechanism of beta 2m Molecule-Induced Changes in the Peptide Presentation Profile in a Bony Fish.
Iscience, 23, 2020
5K08
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BU of 5k08 by Molmil
RecA mini intein-Zeise's salt complex
Descriptor: 3,3',3''-phosphanetriyltripropanoic acid, RecA mini intein, SULFATE ION, ...
Authors:Li, Z, Li, H.M.
Deposit date:2016-05-17
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Structural insights into protein splicing inhibition by platinum therapeutics as potential anti-microbials
To be published
1GGO
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BU of 1ggo by Molmil
T453A MUTANT OF PYRUVATE, PHOSPHATE DIKINASE
Descriptor: PROTEIN (PYRUVATE, PHOSPHATE DIKINASE), SULFATE ION
Authors:Li, Z, Herzberg, O.
Deposit date:2000-08-29
Release date:2001-01-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of domain-domain docking sites within Clostridium symbiosum pyruvate phosphate dikinase by amino acid replacement.
J.Biol.Chem., 275, 2000
5JKP
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BU of 5jkp by Molmil
Crystal structure of immunity protein Pa5087 from Pseudomonas aeruginosa
Descriptor: Uncharacterized protein
Authors:Li, Z.Q, Gao, Z.Q, She, Z, Dong, Y.H.
Deposit date:2016-04-26
Release date:2016-08-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.106 Å)
Cite:Structural analysis of Pseudomonas aeruginosa H3-T6SS immunity proteins
Febs Lett., 590, 2016
6VSI
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BU of 6vsi by Molmil
Crystal structure of FKBP12 of Candida auris
Descriptor: Peptidylprolyl isomerase, SULFATE ION
Authors:Li, Z, Li, H, Hernandez, G, LeMaster, D.
Deposit date:2020-02-11
Release date:2020-04-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure and transient dimerization for the FKBP12 protein from the pathogenic fungus Candida auris.
Biochem.Biophys.Res.Commun., 525, 2020
6AG0
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BU of 6ag0 by Molmil
The X-ray Crystallographic Structure of Maltooligosaccharide-forming Amylase from Bacillus stearothermophilus STB04
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-amylase, CALCIUM ION
Authors:Li, Z.F, Li, Y.L, Ban, X.F, Zhang, C.Y, Jin, T.C, Xie, X.F, Gu, Z.B, Li, C.M.
Deposit date:2018-08-09
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a maltooligosaccharide-forming amylase from Bacillus stearothermophilus STB04.
Int.J.Biol.Macromol., 138, 2019
4Y9J
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BU of 4y9j by Molmil
Crystal Structure of Caenorhabditis elegans ACDH-11 in complex with C11-CoA
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Protein ACDH-11, isoform b, ...
Authors:Li, Z.J, Sun, F.
Deposit date:2015-02-17
Release date:2015-06-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Acyl-CoA Dehydrogenase Drives Heat Adaptation by Sequestering Fatty Acids
Cell, 161, 2015
4Y9L
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BU of 4y9l by Molmil
Crystal Structure of Caenorhabditis elegans ACDH-11
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Protein ACDH-11, isoform b
Authors:Li, Z.J, Zhai, Y.J, Zhang, K, Sun, F.
Deposit date:2015-02-17
Release date:2015-06-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Acyl-CoA Dehydrogenase Drives Heat Adaptation by Sequestering Fatty Acids
Cell, 161, 2015
7BSI
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BU of 7bsi by Molmil
Epstein-Barr virus, one asymmetric unit structure of the icosahedral tegumented capsid
Descriptor: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
Authors:Li, Z, Yu, X.
Deposit date:2020-03-30
Release date:2020-09-30
Last modified:2020-10-14
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:CryoEM structure of the tegumented capsid of Epstein-Barr virus.
Cell Res., 30, 2020
7BQX
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BU of 7bqx by Molmil
Epstein-Barr virus, C5 portal vertex
Descriptor: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
Authors:Li, Z, Yu, X.
Deposit date:2020-03-25
Release date:2020-09-30
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:CryoEM structure of the tegumented capsid of Epstein-Barr virus.
Cell Res., 30, 2020

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