Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1191 件

8EFN
DownloadVisualize
BU of 8efn by Molmil
Structure of Sp-STING3 from Stylophora pistillata coral in complex with 3',3'-cGAMP
分子名称: 1,2-ETHANEDIOL, 2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one, Stimulator of interferon genes protein
著者Li, Y, Slavik, K.M, Morehouse, B.R, Mears, K, Kranzusch, P.J.
登録日2022-09-08
公開日2023-07-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
1BM6
DownloadVisualize
BU of 1bm6 by Molmil
SOLUTION STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN STROMELYSIN-1 COMPLEXED TO A POTENT NON-PEPTIDIC INHIBITOR, NMR, 20 STRUCTURES
分子名称: 1-METHYLOXY-4-SULFONE-BENZENE, 3-METHYLPYRIDINE, CALCIUM ION, ...
著者Li, Y, Zhang, X, Melton, R, Ganu, V, Gonnella, N.C.
登録日1998-07-29
公開日1999-07-29
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the catalytic domain of human stromelysin-1 complexed to a potent, nonpeptidic inhibitor.
Biochemistry, 37, 1998
7KPW
DownloadVisualize
BU of 7kpw by Molmil
Structure of the H-lobe of yeast CKM
分子名称: Mediator of RNA polymerase II transcription subunit 12
著者Li, Y.C, Chao, T.C, Kim, H.J, Cholko, T, Chen, S.F, Nakanishi, K, Chang, C.E, Murakami, K, Garcia, B.A, Boyer, T.G, Tsai, K.L.
登録日2020-11-12
公開日2021-01-27
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structure and noncanonical Cdk8 activation mechanism within an Argonaute-containing Mediator kinase module.
Sci Adv, 7, 2021
7KPX
DownloadVisualize
BU of 7kpx by Molmil
Structure of the yeast CKM
分子名称: Mediator of RNA polymerase II transcription subunit 12, Mediator of RNA polymerase II transcription subunit 13, Meiotic mRNA stability protein kinase SSN3, ...
著者Li, Y.C, Chao, T.C, Kim, H.J, Cholko, T, Chen, S.F, Nakanishi, K, Chang, C.E, Murakami, K, Garcia, B.A, Boyer, T.G, Tsai, K.L.
登録日2020-11-12
公開日2021-01-27
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structure and noncanonical Cdk8 activation mechanism within an Argonaute-containing Mediator kinase module.
Sci Adv, 7, 2021
7KPV
DownloadVisualize
BU of 7kpv by Molmil
Structure of kinase and Central lobes of yeast CKM
分子名称: Mediator of RNA polymerase II transcription subunit 12, Mediator of RNA polymerase II transcription subunit 13, Meiotic mRNA stability protein kinase SSN3, ...
著者Li, Y.C, Chao, T.C, Kim, H.J, Cholko, T, Chen, S.F, Nakanishi, K, Chang, C.E, Murakami, K, Garcia, B.A, Boyer, T.G, Tsai, K.L.
登録日2020-11-12
公開日2021-01-27
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure and noncanonical Cdk8 activation mechanism within an Argonaute-containing Mediator kinase module.
Sci Adv, 7, 2021
1XGP
DownloadVisualize
BU of 1xgp by Molmil
Structure for antibody HyHEL-63 Y33A mutant complexed with hen egg lysozyme
分子名称: Lysozyme C, antibody kappa heavy chain, antibody kappa light chain
著者Li, Y, Mariuzza, R.A.
登録日2004-09-17
公開日2005-09-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces
Structure, 13, 2005
1XGR
DownloadVisualize
BU of 1xgr by Molmil
Structure for antibody HyHEL-63 Y33I mutant complexed with hen egg lysozyme
分子名称: Lysozyme C, antibody kappa heavy chain, antibody kappa light chain
著者Li, Y, Huang, Y, Swaminathan, C.P, Smith-Gill, S.J, Mariuzza, R.A.
登録日2004-09-17
公開日2005-09-06
最終更新日2013-10-02
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces
Structure, 13, 2005
1XGU
DownloadVisualize
BU of 1xgu by Molmil
Structure for antibody HyHEL-63 Y33F mutant complexed with hen egg lysozyme
分子名称: Lysozyme C, antibody kappa heavy chain, antibody kappa light chain
著者Li, Y, Huang, Y, Swaminathan, C.P, Smith-Gill, S.J, Mariuzza, R.A.
登録日2004-09-17
公開日2005-09-06
最終更新日2013-10-02
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces
Structure, 13, 2005
1KQL
DownloadVisualize
BU of 1kql by Molmil
Crystal structure of the C-terminal region of striated muscle alpha-tropomyosin at 2.7 angstrom resolution
分子名称: Fusion Protein of and striated muscle alpha-tropomyosin and the GCN4 leucine zipper
著者Li, Y, Mui, S, Brown, J.H, Strand, J, Reshetnikova, L, Tobacman, L.S, Cohen, C.
登録日2002-01-07
公開日2002-05-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The crystal structure of the C-terminal fragment of striated-muscle alpha-tropomyosin reveals a key troponin T recognition site.
Proc.Natl.Acad.Sci.USA, 99, 2002
1XGT
DownloadVisualize
BU of 1xgt by Molmil
Structure for antibody HyHEL-63 Y33L mutant complexed with hen egg lysozyme
分子名称: Lysozyme C, antibody kappa heavy chain, antibody kappa light chain
著者Li, Y, Mariuzza, R.A.
登録日2004-09-17
公開日2005-09-06
最終更新日2013-10-02
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces
Structure, 13, 2005
5V4B
DownloadVisualize
BU of 5v4b by Molmil
Crystal structure of the Skp1-FBXW7-DISC1 complex
分子名称: DISC1 peptide, F-box/WD repeat-containing protein 7, IMIDAZOLE, ...
著者Li, Y, Baillie, G.S, Hao, B.
登録日2017-03-08
公開日2017-09-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献FBXW7 regulates DISC1 stability via the ubiquitin-proteosome system.
Mol. Psychiatry, 23, 2018
1XGQ
DownloadVisualize
BU of 1xgq by Molmil
Structure for antibody HyHEL-63 Y33V mutant complexed with hen egg lysozyme
分子名称: Lysozyme C, antibody kappa heavy chain, antibody kappa light chain
著者Li, Y, Mariuzza, R.A.
登録日2004-09-17
公開日2005-09-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces
Structure, 13, 2005
5DO2
DownloadVisualize
BU of 5do2 by Molmil
Complex structure of MERS-RBD bound with 4C2 antibody
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4C2 heavy chain, 4C2 light chain, ...
著者Li, Y, Wan, Y, Liu, P, Zhao, J, Lu, G, Qi, J, Wang, Q, Lu, X, Wu, Y, Liu, W, Yuen, K.Y, Perlman, S, Gao, G.F, Yan, J.
登録日2015-09-10
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.409 Å)
主引用文献A humanized neutralizing antibody against MERS-CoV targeting the receptor-binding domain of the spike protein.
Cell Res., 25, 2015
8GJW
DownloadVisualize
BU of 8gjw by Molmil
Structure of a cGAS-like receptor Cv-cGLR1 from C. virginica
分子名称: SULFATE ION, cGAS-like receptor 1
著者Li, Y, Morehouse, B.R, Slavik, K.M, Liu, J, Toyoda, H, Kranzusch, P.J.
登録日2023-03-16
公開日2023-07-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
8GJZ
DownloadVisualize
BU of 8gjz by Molmil
Structure of a STING receptor from S. pistillata Sp-STING1 bound to 2'3'-cUA
分子名称: 2'3'-cUA, Stimulator of interferon genes protein
著者Li, Y, Toyoda, H, Slavik, K.M, Morehouse, B.R, Kranzusch, P.J.
登録日2023-03-16
公開日2023-07-05
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
8HM0
DownloadVisualize
BU of 8hm0 by Molmil
F8-A22-E4 complex of MPXV in trimeric form
分子名称: DNA polymerase, DNA polymerase processivity factor component A20, E4R
著者Li, Y.N, Shen, Y.P, Hu, Z.W, Yan, R.H.
登録日2022-12-02
公開日2023-05-31
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for the assembly of the DNA polymerase holoenzyme from a monkeypox virus variant.
Sci Adv, 9, 2023
8HLZ
DownloadVisualize
BU of 8hlz by Molmil
F8-A22-E4 complex of MPXV in hexameric form
分子名称: DNA polymerase, DNA polymerase processivity factor component A20, E4R
著者Li, Y.N, Shen, Y.P, Hu, Z.W, Yan, R.H.
登録日2022-12-02
公開日2023-05-31
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis for the assembly of the DNA polymerase holoenzyme from a monkeypox virus variant.
Sci Adv, 9, 2023
1VF6
DownloadVisualize
BU of 1vf6 by Molmil
2.1 Angstrom crystal structure of the PALS-1-L27N and PATJ L27 heterodimer complex
分子名称: MAGUK p55 subfamily member 5, PALS1-associated tight junction protein
著者Li, Y, Lavie, A, Margolis, B, Karnak, D.
登録日2004-04-09
公開日2004-04-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for L27 domain-mediated assembly of signaling and cell polarity complexes.
Embo J., 23, 2004
6O59
DownloadVisualize
BU of 6o59 by Molmil
Crystal structure of the N-terminal domain of the A subunit of the Bacillus megaterium spore germinant receptor GerK3
分子名称: Germination protein
著者Li, Y, Hao, B.
登録日2019-03-01
公開日2019-05-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structural and functional analyses of the N-terminal domain of the A subunit of aBacillus megateriumspore germinant receptor.
Proc.Natl.Acad.Sci.USA, 116, 2019
3C0F
DownloadVisualize
BU of 3c0f by Molmil
Crystal Structure of a novel non-Pfam protein AF1514 from Archeoglobus fulgidus DSM 4304 solved by S-SAD using a Cr X-ray source
分子名称: Uncharacterized protein AF_1514
著者Li, Y, Bahti, P, Shaw, N, Song, G, Yin, J, Zhu, J.-Y, Zhang, H, Xu, H, Wang, B.-C, Liu, Z.-J.
登録日2008-01-20
公開日2008-02-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a novel non-Pfam protein AF1514 from Archeoglobus fulgidus DSM 4304 solved by S-SAD using a Cr X-ray source.
Proteins, 71, 2008
3D34
DownloadVisualize
BU of 3d34 by Molmil
Structure of the F-spondin domain of mindin
分子名称: CALCIUM ION, NICKEL (II) ION, Spondin-2
著者Li, Y, Mariuzza, R.A.
登録日2008-05-09
公開日2009-02-17
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the F-spondin domain of mindin, an integrin ligand and pattern recognition molecule.
Embo J., 28, 2009
8J4I
DownloadVisualize
BU of 8j4i by Molmil
Unveiling the Role of Human Prohibitin 2 as a Mitochondrial Calcium Channel in Parkinson's Disease
分子名称: Prohibitin-2
著者Li, Y.Y, Fang, Y, Gao, Y.X, Ding, W, Yang, J, Liu, Y, Shen, B, Wang, J.F, Zhou, S.
登録日2023-04-20
公開日2024-06-05
実験手法SOLUTION NMR
主引用文献Human Prohibitin 2 is a Mitochondrial Ca2+-Selective Channel
To Be Published
7X88
DownloadVisualize
BU of 7x88 by Molmil
Crystal structure of ENL YEATS domain T2 mutant in complex with histone H3 acetylation at K27
分子名称: CITRIC ACID, Histone H3K27ac(24-27) peptide, Protein ENL
著者Li, Y.Y, Li, H.T.
登録日2022-03-11
公開日2023-01-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Hotspot mutations in the structured ENL YEATS domain link aberrant transcriptional condensates and cancer.
Mol.Cell, 82, 2022
3B98
DownloadVisualize
BU of 3b98 by Molmil
Crystal structure of zebrafish prostacyclin synthase (cytochrome P450 8A1)
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Prostaglandin I2 synthase
著者Li, Y.-C, Chiang, C.-W, Yeh, H.-C, Hsu, P.-Y, Whitby, F.G, Wang, L.-H, Chan, N.-L.
登録日2007-11-03
公開日2007-11-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structures of Prostacyclin Synthase and Its Complexes with Substrate Analog and Inhibitor Reveal a Ligand-specific Heme Conformation Change
J.Biol.Chem., 283, 2008
4NIC
DownloadVisualize
BU of 4nic by Molmil
Crystal structure of Klebsiella pneumoniae RstA BeF3-activated N-terminal receiver domain
分子名称: BERYLLIUM TRIFLUORIDE ION, DNA-binding transcriptional regulator RstA, MAGNESIUM ION
著者Li, Y.C, Hsiao, C.D.
登録日2013-11-06
公開日2014-07-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Structural dynamics of the two-component response regulator RstA in recognition of promoter DNA element.
Nucleic Acids Res., 42, 2014

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon