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PDB: 21374 results

1HOY
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NMR STRUCTURE OF THE COMPLEX BETWEEN A-BUNGAROTOXIN AND A MIMOTOPE OF THE NICOTINIC ACETYLCHOLINE RECEPTOR
Descriptor: LONG NEUROTOXIN 1, MIMOTOPE OF THE NICOTINIC ACETYLCHOLINE RECEPTOR
Authors:Scarselli, M, Spiga, O, Ciutti, A, Bracci, L, Lelli, B, Lozzi, L, Calamandrei, D, Bernini, A, Di Maro, D, Niccolai, N, Neri, P.
Deposit date:2000-12-12
Release date:2000-12-27
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:NMR structure of alpha-bungarotoxin free and bound to a mimotope of the nicotinic acetylcholine receptor.
Biochemistry, 41, 2002
2YPT
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BU of 2ypt by Molmil
Crystal structure of the human nuclear membrane zinc metalloprotease ZMPSTE24 mutant (E336A) in complex with a synthetic CSIM tetrapeptide from the C-terminus of prelamin A
Descriptor: CAAX PRENYL PROTEASE 1 HOMOLOG, PRELAMIN-A/C, ZINC ION
Authors:Pike, A.C.W, Dong, Y.Y, Quigley, A, Dong, L, Savitsky, P, Cooper, C.D.O, Chaikuad, A, Goubin, S, Shrestha, L, Li, Q, Mukhopadhyay, S, Yang, J, Xia, X, Shintre, C.A, Barr, A.J, Berridge, G, Chalk, R, Bray, J.E, von Delft, F, Bullock, A, Bountra, C, Arrowsmith, C.H, Edwards, A, Burgess-Brown, N, Carpenter, E.P.
Deposit date:2012-11-01
Release date:2012-12-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:The Structural Basis of Zmpste24-Dependent Laminopathies.
Science, 339, 2013
2YDZ
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BU of 2ydz by Molmil
X-ray structure of the cyan fluorescent protein SCFP3A (K206A mutant)
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:von Stetten, D, Goedhart, J, Noirclerc-Savoye, M, Lelimousin, M, Joosen, L, Hink, M.A, van Weeren, L, Gadella, T.W.J, Royant, A.
Deposit date:2011-03-25
Release date:2012-03-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structure-Guided Evolution of Cyan Fluorescent Proteins Towards a Quantum Yield of 93%
Nat.Commun, 3, 2012
1OVV
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BU of 1ovv by Molmil
CRYSTAL STRUCTURE OF FOUR-HELIX BUNDLE MODEL di-Co(II)-DF1-L13A (form II)
Descriptor: COBALT (II) ION, FOUR-HELIX BUNDLE MODEL di-Co(II)-DF1-L13A (form II)
Authors:Di Costanzo, L, Geremia, S.
Deposit date:2003-03-27
Release date:2004-04-06
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Response of a designed metalloprotein to changes in metal ion coordination, exogenous ligands, and active site volume determined by X-ray crystallography.
J.Am.Chem.Soc., 127, 2005
1Y7V
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X-ray structure of human acid-beta-glucosidase covalently bound to conduritol B epoxide
Descriptor: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glucosylceramidase, ...
Authors:Premkumar, L, Sawkar, A.R, Boldin-Adamsky, S, Toker, L, Silman, I, Kelly, J.W, Futerman, A.H, Sussman, J.L, Israel Structural Proteomics Center (ISPC)
Deposit date:2004-12-10
Release date:2005-04-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray structure of human acid-beta-glucosidase covalently bound to conduritol-B-epoxide. Implications for Gaucher disease.
J.Biol.Chem., 280, 2005
1OVR
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BU of 1ovr by Molmil
CRYSTAL STRUCTURE OF FOUR-HELIX BUNDLE MODEL di-Mn(II)-DF1-L13
Descriptor: MANGANESE (II) ION, four-helix bundle model di-Mn(II)-DF1-L13
Authors:Di Costanzo, L, Geremia, S.
Deposit date:2003-03-27
Release date:2004-05-18
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Response of a designed metalloprotein to changes in metal ion coordination, exogenous ligands, and active site volume determined by X-ray crystallography.
J.Am.Chem.Soc., 127, 2005
2WKS
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BU of 2wks by Molmil
Structure of Helicobacter pylori Type II Dehydroquinase with a new carbasugar-thiophene inhibitor.
Descriptor: (1R,4S,5R)-1,4,5-trihydroxy-3-[(5-methyl-1-benzothiophen-2-yl)methoxy]cyclohex-2-ene-1-carboxylic acid, 3-DEHYDROQUINATE DEHYDRATASE
Authors:Otero, J.M, Guardado-Calvo, P, Llamas-Saiz, A.L, Prazeres, V.F.V, Tizon, L, Castedo, L, Lamb, H, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2009-06-17
Release date:2009-11-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Synthesis and biological evaluation of new nanomolar competitive inhibitors of Helicobacter pylori type II dehydroquinase. Structural details of the role of the aromatic moieties with essential residues.
J. Med. Chem., 53, 2010
368D
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BU of 368d by Molmil
STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG)
Descriptor: DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3')
Authors:Fernandez, L.G, Subirana, J.A, Verdaguer, N, Pyshnyi, D, Campos, L, Malinina, L.
Deposit date:1997-12-19
Release date:1998-07-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural variability of A-DNA in crystals of the octamer d(pCpCpCpGpCpGpGpG)
J.Biomol.Struct.Dyn., 15, 1997
1TGL
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BU of 1tgl by Molmil
A SERINE PROTEASE TRIAD FORMS THE CATALYTIC CENTRE OF A TRIACYLGLYCEROL LIPASE
Descriptor: TRIACYL-GLYCEROL ACYLHYDROLASE
Authors:Brady, L, Brzozowski, A.M, Derewenda, Z.S, Dodson, E.J, Dodson, G.G, Tolley, S.P, Turkenburg, J.P, Christiansen, L, Huge-Jensen, B, Norskov, L, Thim, L.
Deposit date:1990-02-05
Release date:1990-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A serine protease triad forms the catalytic centre of a triacylglycerol lipase.
Nature, 343, 1990
2Z8N
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BU of 2z8n by Molmil
Structural basis for the catalytic mechanism of phosphothreonine lyase
Descriptor: 27.5 kDa virulence protein, SULFATE ION
Authors:Chen, L, Wang, H, Gu, L, Huang, N, Zhou, J.M, Chai, J.
Deposit date:2007-09-07
Release date:2007-12-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the catalytic mechanism of phosphothreonine lyase.
Nat.Struct.Mol.Biol., 15, 2008
3BB6
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BU of 3bb6 by Molmil
Crystal structure of the P64488 protein from E.coli (strain K12). Northeast Structural Genomics Consortium target ER596
Descriptor: Uncharacterized protein yeaR, ZINC ION
Authors:Kuzin, A.P, Su, M, Seetharaman, J, Wang, D, Janjua, H, Owens, L, Ma, L.-C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-11-09
Release date:2007-11-20
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-Ray structure of the P64488 from E.coli (strain K12).
To be Published
3BID
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BU of 3bid by Molmil
Crystal structure of the NMB1088 protein from Neisseria meningitidis. Northeast Structural Genomics Consortium target MR91
Descriptor: UPF0339 protein NMB1088
Authors:Forouhar, F, Neely, H, Seetharaman, J, Mao, L, Fang, Y, Xiao, R, Owen, L.A, Maglaqui, M, Cunningham, K, Baran, M.C, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-11-30
Release date:2007-12-18
Last modified:2020-01-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the NMB1088 protein from Neisseria meningitidis.
To be Published
8WXV
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BU of 8wxv by Molmil
Structure of WDR5 in complex with WIN motif containing SET1B
Descriptor: SET1B, WD repeat-containing protein 5
Authors:Xu, L, Yang, Y.
Deposit date:2023-10-30
Release date:2024-06-26
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural studies of WDR5 in complex with MBD3C WIN motif reveal a unique binding mode.
J.Biol.Chem., 300, 2024
8Y8E
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BU of 8y8e by Molmil
Structure of HCoV-HKU1C spike in the inactive-2up conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 2024
8WXQ
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BU of 8wxq by Molmil
Structure of WDR5 in complex with WIN motif containing MBD3C
Descriptor: GLY-ALA-ALA-ARG-CYS-ARG-VAL-PHE-SER-PRO, WD repeat-containing protein 5
Authors:Xu, L, Yang, Y.
Deposit date:2023-10-30
Release date:2024-06-26
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural studies of WDR5 in complex with MBD3C WIN motif reveal a unique binding mode.
J.Biol.Chem., 300, 2024
8WXT
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BU of 8wxt by Molmil
Structure of WDR5 in complex with WIN motif containing MBD3C R45E/V46G
Descriptor: MBD3C, WD repeat-containing protein 5
Authors:Xu, L, Yang, Y.
Deposit date:2023-10-30
Release date:2024-06-26
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural studies of WDR5 in complex with MBD3C WIN motif reveal a unique binding mode.
J.Biol.Chem., 300, 2024
8Y88
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BU of 8y88 by Molmil
Structure of HCoV-HKU1C spike in the functionally anchored-2up conformation with 2TMPRSS2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Liu, X.C, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 2024
8WXX
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Structure of WDR5 in complex with WIN motif containing SET1B E1750R/G1751V
Descriptor: SET1B, WD repeat-containing protein 5
Authors:Xu, L, Yang, Y.
Deposit date:2023-10-30
Release date:2024-06-26
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural studies of WDR5 in complex with MBD3C WIN motif reveal a unique binding mode.
J.Biol.Chem., 300, 2024
8Y7X
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BU of 8y7x by Molmil
Structure of HCoV-HKU1A spike in the functionally anchored-3up conformation with 3TMPRSS2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Liu, X.C, Sun, L, Yang, H.T.
Deposit date:2024-02-05
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 2024
8DW9
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BU of 8dw9 by Molmil
Crystal structure of neutralizing antibody D29 Fab in complex with SARS-CoV-2 spike receptor binding domain (RBD)
Descriptor: D29 Fab light chain, D29 Heavy chain, Spike protein S1
Authors:Reddem, E.R, Shapiro, L.
Deposit date:2022-08-01
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structural insights into broadly neutralizing antibodies elicited by hybrid immunity against SARS-CoV-2.
Emerg Microbes Infect, 12, 2023
8Y8G
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BU of 8y8g by Molmil
Structure of HCoV-HKU1C spike in the glycan-activated-1up conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 2024
8DXS
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BU of 8dxs by Molmil
Cryo-EM structure of RBD-directed neutralizing antibody P2B4 in complex with prefusion SARS-CoV-2 spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, P2B4 Heavy chain, P2B4 Light chain, ...
Authors:Reddem, E.R, Shapiro, L.
Deposit date:2022-08-03
Release date:2022-12-07
Last modified:2023-01-18
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structural insights into broadly neutralizing antibodies elicited by hybrid immunity against SARS-CoV-2.
Emerg Microbes Infect, 12, 2023
8VAO
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BU of 8vao by Molmil
Simulation-driven design of prefusion stabilized SARS-CoV-2 spike S2 antigen
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2
Authors:Zhou, L, McLellan, J.S.
Deposit date:2023-12-11
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Simulation-Driven Design of Stabilized SARS-CoV-2 Spike S2 Immunogens
To Be Published
8DWA
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BU of 8dwa by Molmil
Crystal structure of neutralizing antibody P1D9 Fab in complex with SARS-CoV-2 spike receptor binding domain (RBD)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, P1D9 Heavy chain, P1D9 Light chain, ...
Authors:Reddem, E.R, Shapiro, L.
Deposit date:2022-08-01
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into broadly neutralizing antibodies elicited by hybrid immunity against SARS-CoV-2.
Emerg Microbes Infect, 12, 2023
8Y8B
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BU of 8y8b by Molmil
Local structure of HCoV-HKU1C spike in complex with TMPRSS2 and glycan
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Wang, H.F, Zhang, X, Lu, Y.C, Liu, X.C, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 2024

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PDB entries from 2024-07-31

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