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PDB: 180 results

1NTP
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BU of 1ntp by Molmil
USE OF THE NEUTRON DIFFRACTION H/D EXCHANGE TECHNIQUE TO DETERMINE THE CONFORMATIONAL DYNAMICS OF TRYPSIN
Descriptor: BETA-TRYPSIN, PHOSPHORYLISOPROPANE
Authors:Kossiakoff, A.A.
Deposit date:1987-09-16
Release date:1988-01-16
Last modified:2024-10-30
Method:NEUTRON DIFFRACTION (1.8 Å)
Cite:Use of the neutron diffraction--H/D exchange technique to determine the conformational dynamics of trypsin
Basic Life Sci., 27, 1984
3PGF
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BU of 3pgf by Molmil
Crystal structure of maltose bound MBP with a conformationally specific synthetic antigen binder (sAB)
Descriptor: GLYCEROL, IMIDAZOLE, Maltose-binding periplasmic protein, ...
Authors:Kossiakoff, A.A, Duguid, E.M, Sandstrom, A.
Deposit date:2010-11-01
Release date:2011-03-09
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Allosteric control of ligand-binding affinity using engineered conformation-specific effector proteins.
Nat.Struct.Mol.Biol., 18, 2011
1TGN
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BU of 1tgn by Molmil
STRUCTURE OF BOVINE TRYPSINOGEN AT 1.9 ANGSTROMS RESOLUTION
Descriptor: TRYPSINOGEN
Authors:Kossiakoff, A.A, Stroud, R.M.
Deposit date:1979-09-19
Release date:1979-10-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of bovine trypsinogen at 1.9 A resolution.
Biochemistry, 16, 1977
5VKD
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BU of 5vkd by Molmil
Crystal structure of C-terminal domain of Ebola (Bundibugyo) nucleoprotein in complex with Fab fragment
Descriptor: Fab Heavy Chain, Fab light chain, Nucleoprotein
Authors:Radwanska, M.J, Derewenda, U, Kossiakoff, A, Derewenda, Z.S.
Deposit date:2017-04-21
Release date:2018-04-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:The structure of the C-terminal domain of the nucleoprotein from the Bundibugyo strain of the Ebola virus in complex with a pan-specific synthetic Fab.
Acta Crystallogr D Struct Biol, 74, 2018
1S9U
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BU of 1s9u by Molmil
Atomic structure of a putative anaerobic dehydrogenase component
Descriptor: DI(HYDROXYETHYL)ETHER, SULFATE ION, putative component of anaerobic dehydrogenases
Authors:Qiu, Y, Zhang, R, Tereshko, V, Kim, Y, Collart, F, Joachimiak, A, Kossiakoff, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-02-05
Release date:2004-06-08
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:The 1.38 A crystal structure of DmsD protein from Salmonella typhimurium, a proofreading chaperone on the Tat pathway.
Proteins, 71, 2008
6CBV
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BU of 6cbv by Molmil
Crystal structure of BRIL bound to an affinity matured synthetic antibody.
Descriptor: BRIL, FORMIC ACID, GLYCEROL, ...
Authors:Mukherjee, S, Skrobek, B, Kossiakoff, A.A.
Deposit date:2018-02-05
Release date:2019-02-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.872 Å)
Cite:Synthetic antibodies against BRIL as universal fiducial marks for single-particle cryoEM structure determination of membrane proteins.
Nat Commun, 11, 2020
9AWE
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BU of 9awe by Molmil
The crystal structure of an engineered Protein GF with Human Kappa Fab
Descriptor: Fab Heavy Chain, Fab Light Chain, Histone chaperone ASF1, ...
Authors:Slezak, T, Kossiakoff, A.A.
Deposit date:2024-03-05
Release date:2025-02-05
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Engineered protein G variants for multifunctional antibody-based assemblies.
Protein Sci., 34, 2025
9AVO
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BU of 9avo by Molmil
The crystal structure of an engineered Protein GD with Human Kappa Fab
Descriptor: Fab Heavy Chain, Fab Light Chain, Histone chaperone ASF1, ...
Authors:Slezak, T, Kossiakoff, A.A.
Deposit date:2024-03-04
Release date:2025-02-05
Method:X-RAY DIFFRACTION (3 Å)
Cite:Engineered protein G variants for multifunctional antibody-based assemblies.
Protein Sci., 34, 2025
3PJS
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BU of 3pjs by Molmil
Mechanism of Activation Gating in the Full-Length KcsA K+ Channel
Descriptor: FAB heavy chain, FAB light chain, Voltage-gated potassium channel
Authors:Uysal, S, Cuello, L.G, Kossiakoff, A, Perozo, E.
Deposit date:2010-11-10
Release date:2011-07-06
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Mechanism of activation gating in the full-length KcsA K+ channel.
Proc.Natl.Acad.Sci.USA, 108, 2011
6CMO
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BU of 6cmo by Molmil
Rhodopsin-Gi complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Heavy chain, Fab light chain, ...
Authors:Kang, Y, Kuybeda, O, de Waal, P.W, Mukherjee, S, Van Eps, N, Dutka, P, Zhou, X.E, Bartesaghi, A, Erramilli, S, Morizumi, T, Gu, X, Yin, Y, Liu, P, Jiang, Y, Meng, X, Zhao, G, Melcher, K, Earnst, O.P, Kossiakoff, A.A, Subramaniam, S, Xu, H.E.
Deposit date:2018-03-05
Release date:2018-06-20
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-EM structure of human rhodopsin bound to an inhibitory G protein.
Nature, 558, 2018
3HHR
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BU of 3hhr by Molmil
HUMAN GROWTH HORMONE AND EXTRACELLULAR DOMAIN OF ITS RECEPTOR: CRYSTAL STRUCTURE OF THE COMPLEX
Descriptor: HUMAN GROWTH HORMONE, HUMAN GROWTH HORMONE RECEPTOR (hGHbp)
Authors:De Vos, A.M, Ultsch, M, Kossiakoff, A.A.
Deposit date:1993-12-30
Release date:1994-04-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Human growth hormone and extracellular domain of its receptor: crystal structure of the complex.
Science, 255, 1992
6CW2
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BU of 6cw2 by Molmil
Crystal structure of a yeast SAGA transcriptional coactivator Ada2/Gcn5 HAT subcomplex, crystal form 1
Descriptor: Histone acetyltransferase GCN5, Transcriptional adapter 2, ZINC ION, ...
Authors:Sun, J, Paduch, M, Kim, S.A, Kramer, R.M, Barrios, A.F, Lu, V, Luke, J, Usatyuk, S, Kossiakoff, A.A, Tan, S.
Deposit date:2018-03-29
Release date:2018-09-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Structural basis for activation of SAGA histone acetyltransferase Gcn5 by partner subunit Ada2.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CW3
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BU of 6cw3 by Molmil
Crystal structure of a yeast SAGA transcriptional coactivator Ada2/Gcn5 HAT subcomplex, crystal form 2
Descriptor: Histone acetyltransferase GCN5, Transcriptional adapter 2, ZINC ION, ...
Authors:Sun, J, Paduch, M, Kim, S.A, Kramer, R.M, Barrios, A.F, Lu, V, Luke, J, Usatyuk, S, Kossiakoff, A.A, Tan, S.
Deposit date:2018-03-29
Release date:2018-09-19
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural basis for activation of SAGA histone acetyltransferase Gcn5 by partner subunit Ada2.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5VZ1
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BU of 5vz1 by Molmil
Crystal structure of the Apo Antibody fragment (Fab) raised against C-terminal domain of Ebola nucleoprotein (EBOV, TAFV, BDBV strains)
Descriptor: Apo Antibody Fab Heavy Chain, Apo Antibody Fab Light Chain, ZINC ION
Authors:Radwanska, M.J, Derewenda, U, Kossiakoff, A, Derewenda, Z.S.
Deposit date:2017-05-26
Release date:2018-06-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.112 Å)
Cite:Crystal structure of the Apo Antibody fragment (Fab) raised against C-terminal domain of Ebola nucleoprotein (EBOV, TAFV, BDBV strains)
To Be Published
2HV2
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BU of 2hv2 by Molmil
Crystal Structure of Conserved Protein of Unknown Function from Enterococcus faecalis V583 at 2.4 A Resolution, Probable N-Acyltransferase
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Hypothetical protein, TETRAETHYLENE GLYCOL
Authors:Tereshko, V.A, Qiu, Y, Kossiakoff, A.A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-07-27
Release date:2006-08-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of conserved hypothetical protein from Enterococcus faecalis V583 at 2.4 A resolution.
To be Published
6SNI
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BU of 6sni by Molmil
Cryo-EM structure of nanodisc reconstituted yeast ALG6 in complex with 6AG9 Fab
Descriptor: 6AG9-Fab heavy chain, 6AG9-Fab light chain, CHOLESTEROL HEMISUCCINATE, ...
Authors:Bloch, J.S, Pesciullesi, G, Boilevin, J, Nosol, K, Irobalieva, R.N, Darbre, T, Aebi, M, Kossiakoff, A.A, Reymond, J.L, Locher, K.P.
Deposit date:2019-08-24
Release date:2020-03-11
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure and mechanism of the ER-based glucosyltransferase ALG6.
Nature, 579, 2020
6RLX
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BU of 6rlx by Molmil
X-RAY STRUCTURE OF HUMAN RELAXIN AT 1.5 ANGSTROMS. COMPARISON TO INSULIN AND IMPLICATIONS FOR RECEPTOR BINDING DETERMINANTS
Descriptor: RELAXIN, A-CHAIN, B-CHAIN
Authors:Eigenbrot, C, Randal, M, Kossiakoff, A.A.
Deposit date:1991-06-21
Release date:1993-10-31
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:X-ray structure of human relaxin at 1.5 A. Comparison to insulin and implications for receptor binding determinants.
J.Mol.Biol., 221, 1991
1KF9
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BU of 1kf9 by Molmil
PHAGE DISPLAY DERIVED VARIANT OF HUMAN GROWTH HORMONE COMPLEXED WITH TWO COPIES OF THE EXTRACELLULAR DOMAIN OF ITS RECEPTOR
Descriptor: EXTRACELLULAR DOMAIN HUMAN GROWTH HORMONE RECEPTOR (1-238), PHAGE DISPLAY DERIVED VARIANT HUMAN GROWTH HORMONE
Authors:Schiffer, C.A, Ultsch, M, Walsh, S, Somers, W, De Vos, A.M, Kossiakoff, A.A.
Deposit date:2001-11-19
Release date:2002-11-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of a Phage Display Derived Variant of Human Growth Hormone Complexed to Two Copies of the Extracellular Domain of its Receptor: Evidence for Strong Structural Coupling between Receptor Binding Sites
J.Mol.Biol., 316, 2002
5UEA
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BU of 5uea by Molmil
Structure of antigen-Fab complex with Histone chaperone ASF1
Descriptor: Fab Heavy Chain, Fab Light Chain, Histone chaperone ASF1
Authors:Bailey, L.J, Kossiakoff, A.A.
Deposit date:2016-12-29
Release date:2018-01-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Antibody Switch Residue Engineering for Improved Crystallization Chaperones
To Be Published
3BOG
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BU of 3bog by Molmil
Snow Flea Antifreeze Protein Quasi-racemate
Descriptor: 6.5 kDa glycine-rich antifreeze protein, UNKNOWN LIGAND
Authors:Pentelute, B.L, Kent, S.B.H, Gates, Z.P, Tereshko, V, Kossiakoff, A.A, Kurutz, J, Dashnau, J, Vaderkooi, J.M.
Deposit date:2007-12-17
Release date:2008-09-23
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:X-ray structure of snow flea antifreeze protein determined by racemic crystallization of synthetic protein enantiomers
J.Am.Chem.Soc., 130, 2008
3BOI
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BU of 3boi by Molmil
Snow Flea Antifreeze Protein Racemate
Descriptor: 6.5 kDa glycine-rich antifreeze protein
Authors:Pentelute, B.L, Kent, S.B.H, Gates, Z.P, Tereshko, V, Kossiakoff, A.A, Kurutz, J, Dashnau, J, Vaderkooi, J.M.
Deposit date:2007-12-17
Release date:2008-09-23
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1 Å)
Cite:X-ray structure of snow flea antifreeze protein determined by racemic crystallization of synthetic protein enantiomers
J.Am.Chem.Soc., 130, 2008
5W2B
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BU of 5w2b by Molmil
Crystal structure of C-terminal domain of Ebola (Reston) nucleoprotein in complex with Fab fragment
Descriptor: Fab Heavy Chain, Fab Light Chain, Nucleoprotein
Authors:Radwanska, M.J, Derewenda, U, Kossiakoff, A.A, Derewenda, Z.S.
Deposit date:2017-06-06
Release date:2018-06-13
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The structure of the C-terminal domain of the nucleoprotein from the Bundibugyo strain of the Ebola virus in complex with a pan-specific synthetic Fab.
Acta Crystallogr D Struct Biol, 74, 2018
5EII
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BU of 5eii by Molmil
Structural determination of an protein complex of a Fab with increased solubility
Descriptor: Fab Heavy Chain, Fab Light Chain, Histone chaperone ASF1
Authors:Bailey, L.J, Kossiakoff, A.A, Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)
Deposit date:2015-10-29
Release date:2016-11-09
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structural determination of an protein complex of a Fab with increased solubility
To Be Published
5UEK
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BU of 5uek by Molmil
Structure of antigen-Fab 12E complex with Histone chaperone ASF1
Descriptor: Fab 12E Heavy Chain, Fab 12E Light Chain, Histone chaperone ASF1
Authors:Bailey, L.J, Kossiakoff, A.A.
Deposit date:2017-01-02
Release date:2018-01-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Antibody Switch Residue Engineering for Improved Crystallization Chaperones
To Be Published
7ZYI
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BU of 7zyi by Molmil
Structure of the human sodium/bile acid cotransporter (NTCP) in complex with Fab and nanobody
Descriptor: CHOLESTEROL, GLYCOCHENODEOXYCHOLIC ACID, Nanobody, ...
Authors:Liu, H, Irobalieva, R.N, Bang-Sorensen, R, Nosol, K, Mukherjee, S, Agrawal, P, Stieger, B, Kossiakoff, A.A, Locher, K.P.
Deposit date:2022-05-24
Release date:2022-07-13
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:Structure of human NTCP reveals the basis of recognition and sodium-driven transport of bile salts into the liver.
Cell Res., 32, 2022

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