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PDB: 40 results

7N51
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BU of 7n51 by Molmil
Structure of a bacterial gasdermin from Vitiosangium sp.
Descriptor: Gasdermin
Authors:Johnson, A.G, Kranzusch, P.J.
Deposit date:2021-06-04
Release date:2021-06-16
Last modified:2022-01-26
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Bacterial gasdermins reveal an ancient mechanism of cell death.
Science, 375, 2022
7N50
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BU of 7n50 by Molmil
Structure of a bacterial gasdermin from Bradyrhizobium tropiciagri
Descriptor: Gasdermin
Authors:Johnson, A.G, Kranzusch, P.J.
Deposit date:2021-06-04
Release date:2021-06-23
Last modified:2022-01-26
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Bacterial gasdermins reveal an ancient mechanism of cell death.
Science, 375, 2022
7N52
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BU of 7n52 by Molmil
Structure of a bacterial gasdermin from Runella zeae
Descriptor: Gasdermin
Authors:Johnson, A.G, Kranzusch, P.J.
Deposit date:2021-06-04
Release date:2021-06-23
Last modified:2022-01-26
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Bacterial gasdermins reveal an ancient mechanism of cell death.
Science, 375, 2022
8GBE
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BU of 8gbe by Molmil
Structure of a viral gasdermin protein A47 from Eptesipox virus
Descriptor: Protein A47
Authors:Johnson, A.G, Kranzusch, P.J.
Deposit date:2023-02-25
Release date:2023-03-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structural homology screens reveal poxvirus-encoded proteins impacting inflammasome-mediated defenses.
Biorxiv, 2023
1AKS
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BU of 1aks by Molmil
CRYSTAL STRUCTURE OF THE FIRST ACTIVE AUTOLYSATE FORM OF THE PORCINE ALPHA TRYPSIN
Descriptor: ALPHA TRYPSIN, CALCIUM ION
Authors:Johnson, A, Krishnaswamy, S, Sundaram, P.V, Pattabhi, V.
Deposit date:1996-07-24
Release date:1997-02-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The first structure at 1.8 A resolution of an active autolysate form of porcine alpha-trysoin.
Acta Crystallogr.,Sect.D, 53, 1997
8SL0
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BU of 8sl0 by Molmil
Structure of a bacterial gasdermin slinky-like oligomer
Descriptor: Gasdermin bGSDM
Authors:Johnson, A.G, Mayer, M.L, Kranzusch, P.J.
Deposit date:2023-04-20
Release date:2023-05-17
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure and assembly of a bacterial gasdermin pore.
Nature, 628, 2024
1QQU
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BU of 1qqu by Molmil
CRYSTAL STRUCTURE OF PORCINE BETA TRYPSIN WITH BOUND ACETATE ION
Descriptor: ACETATE ION, BETA TRYPSIN, CALCIUM ION
Authors:Johnson, A, Gautham, N, Pattabhi, V.
Deposit date:1999-06-09
Release date:2000-06-14
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure at 1.63 A resolution of the native form of porcine beta-trypsin: revealing an acetate ion binding site and functional water network.
Biochim.Biophys.Acta, 1435, 1999
8SS1
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BU of 8ss1 by Molmil
Structure of a bacterial death-like domain from Azospirillum sp.
Descriptor: Serine protease
Authors:Johnson, A.G, Kranzusch, P.J.
Deposit date:2023-05-08
Release date:2023-06-07
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:CARD-like domains mediate anti-phage defense in bacterial gasdermin systems.
Biorxiv, 2023
8SRZ
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BU of 8srz by Molmil
Structure of a bacterial death-like domain from Lysobacter enzymogenes
Descriptor: Probable serine protease FE772_23065
Authors:Johnson, A.G, Kranzusch, P.J.
Deposit date:2023-05-08
Release date:2023-06-07
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:CARD-like domains mediate anti-phage defense in bacterial gasdermin systems.
Biorxiv, 2023
2OZR
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BU of 2ozr by Molmil
MMP13 Catalytic Domain Complexed with 4-{[1-methyl-2,4-dioxo-6-(3-phenylprop-1-yn-1-yl)-1,4-dihydroquinazolin-3(2H)-yl]methyl}benzoic acid
Descriptor: 4-{[1-METHYL-2,4-DIOXO-6-(3-PHENYLPROP-1-YN-1-YL)-1,4-DIHYDROQUINAZOLIN-3(2H)-YL]METHYL}BENZOIC ACID, ACETOHYDROXAMIC ACID, CALCIUM ION, ...
Authors:Johnson, A.R, Pavlovsky, A.G, Ortwine, D.F, Prior, F, Man, C.-F, Bornemeier, D.A, Banotai, C.A, Mueller, W.T, McConnell, P, Yan, C.H, Baragi, V, Lesch, C, Roark, W.H, Lie, J.J, Fasquelle, V, Wilson, M, Robertson, D, Datta, K, Guzman, R, Han, H.-K, Dyer, R.D.
Deposit date:2007-02-27
Release date:2007-07-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery and characterization of a novel inhibitor of matrix metalloprotease-13 that reduces cartilage damage in vivo without joint fibroplasia side effects.
J.Biol.Chem., 282, 2007
1APL
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BU of 1apl by Molmil
CRYSTAL STRUCTURE OF A MAT-ALPHA2 HOMEODOMAIN-OPERATOR COMPLEX SUGGESTS A GENERAL MODEL FOR HOMEODOMAIN-DNA INTERACTIONS
Descriptor: DNA (5'-D(*AP*CP*AP*TP*GP*TP*AP*AP*TP*TP*CP*AP*TP*TP*TP*AP*C P*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*GP*TP*AP*AP*AP*TP*GP*AP*AP*TP*TP*A P*CP*AP*TP*G)-3'), PROTEIN (MAT-ALPHA2 HOMEODOMAIN)
Authors:Wolberger, C, Vershon, A.K, Liu, B, Johnson, A.D, Pabo, C.O.
Deposit date:1993-10-04
Release date:1993-10-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a MAT alpha 2 homeodomain-operator complex suggests a general model for homeodomain-DNA interactions.
Cell(Cambridge,Mass.), 67, 1991
7VJY
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BU of 7vjy by Molmil
Crystal Structure of Sars-Cov-2 Mpro at 1.90 A resolution-1
Descriptor: 3C-like proteinase
Authors:DeMirci, H, Johnson, A.J.
Deposit date:2021-09-29
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography
Crystals, 11, 2021
4GVJ
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BU of 4gvj by Molmil
Tyk2 (JH1) in complex with adenosine di-phosphate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Non-receptor tyrosine-protein kinase TYK2
Authors:Liang, J, Abbema, A.V, Bao, L, Barrett, K, Beresini, M, Berezhkovskiy, L, Blair, W, Chang, C, Driscoll, J, Eigenbrot, C, Ghilardi, N, Gibbons, P, Halladay, J, Johnson, A, Kohli, P.B, Lai, Y, Liimatta, M, Mantik, P, Menghrajani, K, Murray, J, Sambrone, A, Shao, Y, Shia, S, Shin, Y, Smith, J, Sohn, S, Stanley, M, Tsui, V, Ultsch, M, Wu, L, Zhang, B, Magnuson, S.
Deposit date:2012-08-30
Release date:2013-08-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Lead identification of novel and selective TYK2 inhibitors.
Eur.J.Med.Chem., 67, 2013
7UG6
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BU of 7ug6 by Molmil
Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Yelland, J.N, Bravo, J.P.K, Black, J.J.B, Taylor, D.W, Johnson, A.W.
Deposit date:2022-03-24
Release date:2022-12-21
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:A single 2'-O-methylation of ribosomal RNA gates assembly of a functional ribosome.
Nat.Struct.Mol.Biol., 30, 2023
1FMG
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BU of 1fmg by Molmil
CRYSTAL STRUCTURE OF PORCINE BETA TRYPSIN WITH 0.04% POLYDOCANOL
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, SULFATE ION, ...
Authors:Deepthi, S, Johnson, A, Pattabhi, V.
Deposit date:2000-08-17
Release date:2000-09-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of porcine beta-trypsin-detergent complexes: the stabilization of proteins through hydrophilic binding of polydocanol.
Acta Crystallogr.,Sect.D, 57, 2001
1FNI
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BU of 1fni by Molmil
CRYSTAL STRUCTURE OF PORCINE BETA TRYPSIN WITH 0.01% POLYDOCANOL
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, SULFATE ION, ...
Authors:Deepthi, S, Johnson, A, Pattabhi, V.
Deposit date:2000-08-22
Release date:2000-09-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of porcine beta-trypsin-detergent complexes: the stabilization of proteins through hydrophilic binding of polydocanol.
Acta Crystallogr.,Sect.D, 57, 2001
1FN6
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BU of 1fn6 by Molmil
CRYSTAL STRUCTURE OF PORCINE BETA TRYPSIN WITH 0.1% POLYDOCANOL
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, METHANOL, ...
Authors:Deepthi, S, Johnson, A, Pattabhi, V.
Deposit date:2000-08-21
Release date:2000-09-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of porcine beta-trypsin-detergent complexes: the stabilization of proteins through hydrophilic binding of polydocanol.
Acta Crystallogr.,Sect.D, 57, 2001
2RLU
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BU of 2rlu by Molmil
The Three Dimensional Structure of the Moorella thermoacetica Selenocysteine Insertion Sequence RNA Hairpin and its Interaction with the Elongation factor SelB
Descriptor: RNA (5'-R(*GP*GP*UP*UP*GP*CP*GP*GP*GP*UP*CP*UP*CP*GP*CP*AP*AP*CP*C)-3')
Authors:Beribisky, A.V, Tavares, T.J, Amborski, A.N, Motamed, M, Johnson, A.E, Mark, T.L, Johnson, P.E.
Deposit date:2007-08-21
Release date:2008-02-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The three-dimensional structure of the Moorella thermoacetica selenocysteine insertion sequence RNA hairpin and its interaction with the elongation factor SelB
Rna, 13, 2007
8U7I
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BU of 8u7i by Molmil
Structure of the phage immune evasion protein Gad1 bound to the Gabija GajAB complex
Descriptor: Endonuclease GajA, Gabija Anti-Defense 1, Gabija protein GajB
Authors:Antine, S.P, Johnson, A.G, Mooney, S.E, Mayer, M.L, Kranzusch, P.J.
Deposit date:2023-09-15
Release date:2023-11-22
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Structural basis of Gabija anti-phage defence and viral immune evasion.
Nature, 625, 2024
3G0X
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BU of 3g0x by Molmil
Human dihydroorotate dehydrogenase in complex with a leflunomide derivative inhibitor 5
Descriptor: (2Z)-N-biphenyl-4-yl-2-cyano-3-cyclopropyl-3-hydroxyprop-2-enamide, Dihydroorotate dehydrogenase, FLAVIN MONONUCLEOTIDE, ...
Authors:Davies, M, Heikkila, T, McConkey, G.A, Fishwick, C.W.G, Parsons, M.R, Johnson, A.P.
Deposit date:2009-01-29
Release date:2009-06-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-based design, synthesis, and characterization of inhibitors of human and Plasmodium falciparum dihydroorotate dehydrogenases
J.Med.Chem., 52, 2009
8SM3
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BU of 8sm3 by Molmil
Structure of Bacillus cereus VD045 Gabija GajA-GajB Complex
Descriptor: Endonuclease GajA, Gabija protein GajB, SULFATE ION
Authors:Antine, S.P, Mooney, S.E, Johnson, A.G, Kranzusch, P.J.
Deposit date:2023-04-25
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of Gabija anti-phage defence and viral immune evasion.
Nature, 625, 2024
8FNW
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BU of 8fnw by Molmil
Structure of RdrA-RdrB complex from Escherichia coli RADAR defense system
Descriptor: Adenosine deaminase, Archaeal ATPase, ZINC ION
Authors:Duncan-Lowey, B, Johnson, A.G, Rawson, S, Mayer, M.L, Kranzusch, P.J.
Deposit date:2022-12-28
Release date:2023-02-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (6.73 Å)
Cite:Cryo-EM structure of the RADAR supramolecular anti-phage defense complex.
Cell, 186, 2023
8FNT
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BU of 8fnt by Molmil
Structure of RdrA from Escherichia coli RADAR defense system
Descriptor: Archaeal ATPase
Authors:Duncan-Lowey, B, Johnson, A.G, Rawson, S, Mayer, M.L, Kranzusch, P.J.
Deposit date:2022-12-28
Release date:2023-02-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.52 Å)
Cite:Cryo-EM structure of the RADAR supramolecular anti-phage defense complex.
Cell, 186, 2023
8FNV
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BU of 8fnv by Molmil
Structure of RdrB from Escherichia coli RADAR defense system
Descriptor: Adenosine deaminase, ZINC ION
Authors:Duncan-Lowey, B, Johnson, A.G, Rawson, S, Mayer, M.L, Kranzusch, P.J.
Deposit date:2022-12-28
Release date:2023-02-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.11 Å)
Cite:Cryo-EM structure of the RADAR supramolecular anti-phage defense complex.
Cell, 186, 2023
8FNU
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BU of 8fnu by Molmil
Structure of RdrA from Streptococcus suis RADAR defense system
Descriptor: KAP NTPase domain-containing protein
Authors:Duncan-Lowey, B, Johnson, A.G, Rawson, S, Mayer, M.L, Kranzusch, P.J.
Deposit date:2022-12-28
Release date:2023-02-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Cryo-EM structure of the RADAR supramolecular anti-phage defense complex.
Cell, 186, 2023

 

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