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PDB: 49 results
180D
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BU of 180d by Molmil
SEQUENCE-DEPENDENT MICROHETEROGENEITY OF Z-DNA: THE CRYSTAL AND MOLECULAR STRUCTURES OF D(CACGCG).D(CGCGTG) AND D(CGCACG).D(CGTGCG)
Descriptor: DNA (5'-D(*CP*GP*CP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*GP*CP*G)-3')
Authors:Sadasivan, C, Gautham, N.
Deposit date:1994-07-19
Release date:1995-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Sequence-dependent microheterogeneity of Z-DNA: the crystal and molecular structures of d(CACGCG).d(CGCGTG) and d(CGCACG).d(CGTGCG).
J.Mol.Biol., 248, 1995
181D
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BU of 181d by Molmil
SEQUENCE-DEPENDENT MICROHETEROGENEITY OF Z-DNA: THE CRYSTAL AND MOLECULAR STRUCTURES OF D(CACGCG).D(CGCGTG) AND D(CGCACG).D(CGTGCG)
Descriptor: DNA (5'-D(*CP*AP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*TP*G)-3')
Authors:Sadasivan, C, Gautham, N.
Deposit date:1994-07-22
Release date:1995-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Sequence-dependent microheterogeneity of Z-DNA: the crystal and molecular structures of d(CACGCG).d(CGCGTG) and d(CGCACG).d(CGTGCG).
J.Mol.Biol., 248, 1995
351D
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BU of 351d by Molmil
X-RAY CRYSTAL STRUCTURES OF THE HEXAMER DCACGCG: CRYSTALS GROWN IN THE PRESENCE OF RUTHENIUM (II) HEXAMMINE CHLORIDE
Descriptor: DNA (5'-D(*CP*AP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*TP*G)-3')
Authors:Karthe, P, Gautham, N.
Deposit date:1997-08-30
Release date:1997-09-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of d(CACGCG).d(CGCGTG) in crystals grown in the presence of ruthenium III hexammine chloride.
Acta Crystallogr.,Sect.D, 54, 1998
1QQU
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BU of 1qqu by Molmil
CRYSTAL STRUCTURE OF PORCINE BETA TRYPSIN WITH BOUND ACETATE ION
Descriptor: ACETATE ION, BETA TRYPSIN, CALCIUM ION
Authors:Johnson, A, Gautham, N, Pattabhi, V.
Deposit date:1999-06-09
Release date:2000-06-14
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure at 1.63 A resolution of the native form of porcine beta-trypsin: revealing an acetate ion binding site and functional water network.
Biochim.Biophys.Acta, 1435, 1999
4OAQ
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BU of 4oaq by Molmil
Crystal structure of the R-specific Carbonyl Reductase from Candida parapsilosis ATCC 7330
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Aggrawal, N, Mandal, P.K, Gautham, N, Chadha, A.
Deposit date:2014-01-06
Release date:2015-02-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.858 Å)
Cite:Insights into the stereoselectivity of R-specific Carbonyl Reductase from Candida parapsilosis ATCC 7330: Biochemical Characterization and Crystal structure studies
To be Published
4OKL
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BU of 4okl by Molmil
Crystal Structure of d(CCCCGGTACCGGGG)2 at 1.65 Angstrom
Descriptor: 14 mer A-DNA
Authors:Anna, V, Monica, P, Mandal, P.K, Gautham, N.
Deposit date:2014-01-22
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of d(CCCCGGTACCGGGG)2 at 1.65 angstrom resolution.
Acta Crystallogr F Struct Biol Commun, 70, 2014
4ZKK
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BU of 4zkk by Molmil
The novel double-fold structure of d(GCATGCATGC)
Descriptor: COBALT (II) ION, DNA (5'-D(*GP*CP*AP*TP*GP*CP*AP*TP*GP*C)-3')
Authors:Thirugnanasambandam, A, Karthik, S, Mandal, P.K, Gautham, N.
Deposit date:2015-04-30
Release date:2015-10-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:The novel double-folded structure of d(GCATGCATGC): a possible model for triplet-repeat sequences
Acta Crystallogr.,Sect.D, 71, 2015
5WV7
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BU of 5wv7 by Molmil
Crystal structure of d(CCGGGGTACCCCGG)2 at 1.4A resolution
Descriptor: DNA (5'-D(*CP*CP*GP*GP*GP*GP*TP*AP*CP*CP*CP*CP*GP*G)-3')
Authors:Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
Deposit date:2016-12-22
Release date:2017-05-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.406 Å)
Cite:Crystal structure of d(CCGGGGTACCCCGG)2 at 1.4 angstrom resolution.
Acta Crystallogr F Struct Biol Commun, 73, 2017
1LJX
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BU of 1ljx by Molmil
THE STRUCTURE OF D(TPGPCPGPCPA)2 AT 293K: COMPARISON OF THE EFFECT OF SEQUENCE AND TEMPERATURE
Descriptor: 5'-D(*TP*GP*CP*GP*CP*A)-3', MAGNESIUM ION
Authors:Thiyagarajan, S, Satheesh Kumar, P, Rajan, S.S, Gautham, N.
Deposit date:2002-04-23
Release date:2002-05-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of d(TGCGCA)2 at 293 K: comparison of the effects of sequence and temperature.
Acta Crystallogr.,Sect.D, 58, 2002
4EZ2
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BU of 4ez2 by Molmil
Crystal Structure of d(CCGGGACCGG)4 as a four-way junction at 1.6 angstrom resolution
Descriptor: 5'-D(*CP*CP*GP*GP*GP*AP*CP*CP*GP*G)-3', SODIUM ION
Authors:Chakraborty, A, Mandal, P.K, Gautham, N.
Deposit date:2012-05-02
Release date:2012-10-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of d(CCGGGACCGG)(4) as a four-way junction at 1.6 A resolution: new insights into solvent interactions.
Acta Crystallogr.,Sect.F, 68, 2012
5FHJ
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BU of 5fhj by Molmil
Extensive amphimorphism in DNA: Three stable conformations for the decadeoxynucleotide d(GCATGCATGC)
Descriptor: COBALT (II) ION, DNA (5'-D(*GP*CP*AP*TP*GP*CP*AP*TP*GP*C)-3')
Authors:Thirugnanasambandam, A, Karthik, S, Gautham, N.
Deposit date:2015-12-22
Release date:2016-06-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:DNA polymorphism in crystals: three stable conformations for the decadeoxynucleotide d(GCATGCATGC).
Acta Crystallogr D Struct Biol, 72, 2016
1XA2
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BU of 1xa2 by Molmil
Cobalt hexammine induced tautomeric shift in Z-DNA: the structure of d(CGCGCA).d(TGCGCG) in two crystal forms
Descriptor: 5'-D(*CP*GP*CP*GP*CP*A)-3', 5'-D(*TP*GP*CP*GP*CP*G)-3', COBALT HEXAMMINE(III)
Authors:Thiyagarajan, S, Rajan, S.S, Gautham, N.
Deposit date:2004-08-25
Release date:2004-11-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Cobalt hexammine induced tautomeric shift in Z-DNA: the structure of d(CGCGCA)*d(TGCGCG) in two crystal forms.
Nucleic Acids Res., 32, 2004
1XAM
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BU of 1xam by Molmil
Cobalt hexammine induced tautameric shift in Z-DNA: structure of d(CGCGCA).d(TGCGCG) in two crystal forms.
Descriptor: CGCGCA, COBALT HEXAMMINE(III), TG, ...
Authors:Thiyagarajan, S, Rajan, S.S, Gautham, N.
Deposit date:2004-08-26
Release date:2004-11-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Cobalt hexammine induced tautomeric shift in Z-DNA: the structure of d(CGCGCA)*d(TGCGCG) in two crystal forms.
Nucleic Acids Res., 32, 2004
6A1O
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BU of 6a1o by Molmil
Crystal structures of disordered Z-type helices
Descriptor: DNA (5'-D(P*CP*A)-3'), DNA (5'-D(P*CP*AP*CP*A)-3'), DNA (5'-D(P*TP*G)-3'), ...
Authors:Karthik, S, Mandal, P.K, Thirugnanasambandam, A, Gautham, N.
Deposit date:2018-06-07
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structures of disordered Z-type helices.
Nucleosides Nucleotides Nucleic Acids, 38, 2019
6A1Q
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BU of 6a1q by Molmil
Crystal structures of disordered Z-type helices
Descriptor: DNA (5'-D(P*CP*AP*CP*A)-3'), DNA (5'-D(P*TP*GP*TP*G)-3')
Authors:Karthik, S, Mandal, P.K, Thirugnanasambandam, A, Gautham, N.
Deposit date:2018-06-07
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Crystal structures of disordered Z-type helices.
Nucleosides Nucleotides Nucleic Acids, 38, 2019
5FHL
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BU of 5fhl by Molmil
Extensive amphimorphism in DNA: Three stable conformations for the decadeoxynucleotide d(GCATGCATGC)
Descriptor: DNA (5'-D(*GP*CP*AP*TP*GP*CP*AP*TP*GP*C)-3')
Authors:Thirugnanasambandam, A, Karthik, S, Gautham, N.
Deposit date:2015-12-22
Release date:2016-06-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.791 Å)
Cite:DNA polymorphism in crystals: three stable conformations for the decadeoxynucleotide d(GCATGCATGC).
Acta Crystallogr D Struct Biol, 72, 2016
5IYE
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BU of 5iye by Molmil
Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution
Descriptor: DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3'), ZINC ION
Authors:Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
Deposit date:2016-03-24
Release date:2017-03-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.694 Å)
Cite:Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 angstrom resolution.
Nucleosides Nucleotides Nucleic Acids, 36, 2017
5IYG
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BU of 5iyg by Molmil
Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution
Descriptor: DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3')
Authors:Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
Deposit date:2016-03-24
Release date:2017-03-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 angstrom resolution.
Nucleosides Nucleotides Nucleic Acids, 36, 2017
5IYJ
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BU of 5iyj by Molmil
Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution
Descriptor: DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3')
Authors:Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
Deposit date:2016-03-24
Release date:2017-03-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 angstrom resolution.
Nucleosides Nucleotides Nucleic Acids, 36, 2017
3E9W
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BU of 3e9w by Molmil
X-Ray Crystal Structure of the hexamer DCACACG:Crystal grown in the presence of cobalt(III)hexammine Chloride.
Descriptor: 5'-D(*CP*AP*CP*AP*CP*G)-3', 5'-D(*CP*GP*TP*GP*TP*G)-3'
Authors:Venkadesh, S, Mandal, P.K, Gautham, N.
Deposit date:2008-08-24
Release date:2008-09-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The structure of d(CACACG).d(CGTGTG).
Acta Crystallogr.,Sect.F, 65, 2009
3Q5C
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BU of 3q5c by Molmil
Crystal structure of four-way junction with sticky end
Descriptor: DNA (5'-D(*CP*GP*GP*CP*GP*GP*CP*CP*GP*C)-3')
Authors:Venkadesh, S, Mandal, P.K, Gautham, N.
Deposit date:2010-12-28
Release date:2011-05-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:The sequence d(CGGCGGCCGC) self-assembles into a two dimensional rhombic DNA lattice
Biochem.Biophys.Res.Commun., 407, 2011
3QK4
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BU of 3qk4 by Molmil
Crystal structure of d(CGCGGGTACCCGCG)2 as A-DNA duplex
Descriptor: DNA (5'-D(*CP*GP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*CP*G)-3')
Authors:Venkadesh, S, Mandal, P.K, Gautham, N.
Deposit date:2011-01-31
Release date:2011-03-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structure of a full turn of an A-DNA duplex d(CGCGGGTACCCGCG)(2)
Biochem.Biophys.Res.Commun., 407, 2011
3F8O
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BU of 3f8o by Molmil
Structure of d(CACGCG).d(CGCGTG) with low concentration of PdCl2
Descriptor: DNA (5'-D(*DCP*DAP*DCP*DGP*DCP*DG)-3'), DNA (5'-D(*DCP*DGP*DCP*DGP*DTP*DG)-3')
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2008-11-13
Release date:2008-11-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structures of d(CACGCG).d(CGCGTG) grown with different metal ions
To be Published
239D
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BU of 239d by Molmil
POLYMORPHISM IN LEFT HANDED DNA: THE CRYSTAL STRUCTURE OF D(CCCGGG)2
Descriptor: DNA (5'-D(*CP*CP*CP*GP*GP*G)-3')
Authors:Karthe, P, Krishnaswamy, S, Gautham, N.
Deposit date:1995-11-02
Release date:1996-11-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Polymorphism in Left Handed DNA: The Crystal Structure of d(CCCGGG)2
To be Published, 1996
240D
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BU of 240d by Molmil
EFFECT OF END BASE STEPS ON DNA FORM: CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCGGGCCCGG)
Descriptor: DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3')
Authors:Champion, D, Kumar, C.S, Ramakrishnan, B, Gautham, N, Viswamitra, M.A.
Deposit date:1995-11-08
Release date:1996-06-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Effect of End Base Steps on DNA Form: Crystal Structure of the A-DNA Decamer d(CCGGGCCCGG)
To be Published

 

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