Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 5587 results

4TSL
DownloadVisualize
BU of 4tsl by Molmil
Crystal structure of FraC with POC bound (crystal form I)
Descriptor: ACETATE ION, FORMIC ACID, Fragaceatoxin C, ...
Authors:Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
Deposit date:2014-06-19
Release date:2015-03-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
3DPU
DownloadVisualize
BU of 3dpu by Molmil
RocCOR domain tandem of Rab family protein (Roco)
Descriptor: Rab family protein
Authors:Gotthardt, K, Weyand, M, Kortholt, A, Van Haastert, P.J.M, Wittinghofer, A.
Deposit date:2008-07-09
Release date:2008-08-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the Roc-COR domain tandem of C. tepidum, a prokaryotic homologue of the human LRRK2 Parkinson kinase
Embo J., 27, 2008
3DPT
DownloadVisualize
BU of 3dpt by Molmil
COR domain of Rab family protein (Roco)
Descriptor: Rab family protein
Authors:Gotthardt, K, Weyand, M, Kortholt, A, Van Haastert, P.J.M, Wittinghofer, A.
Deposit date:2008-07-09
Release date:2008-08-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the Roc-COR domain tandem of C. tepidum, a prokaryotic homologue of the human LRRK2 Parkinson kinase
Embo J., 27, 2008
4TSN
DownloadVisualize
BU of 4tsn by Molmil
Crystal structure of FraC with POC bound (crystal form II)
Descriptor: ACETATE ION, Fragaceatoxin C, GLYCEROL, ...
Authors:Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
Deposit date:2014-06-19
Release date:2015-03-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
3FZW
DownloadVisualize
BU of 3fzw by Molmil
Crystal Structure of Ketosteroid Isomerase D40N-D103N from Pseudomonas putida (pKSI) with bound equilenin
Descriptor: EQUILENIN, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Caaveiro, J.M.M, Ringe, D, Petsko, G.A.
Deposit date:2009-01-26
Release date:2009-06-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Hydrogen bond coupling in the ketosteroid isomerase active site.
Biochemistry, 48, 2009
4TSQ
DownloadVisualize
BU of 4tsq by Molmil
Crystal structure of FraC with DHPC bound (crystal form III)
Descriptor: 1,2-dihexanoyl-sn-glycero-3-phosphocholine, CHLORIDE ION, Fragaceatoxin C, ...
Authors:Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
Deposit date:2014-06-19
Release date:2015-03-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
1XJ7
DownloadVisualize
BU of 1xj7 by Molmil
Complex Androgen Receptor LBD and RAC3 peptide
Descriptor: 5-ALPHA-DIHYDROTESTOSTERONE, Androgen receptor, RAC3 derived peptide
Authors:Estebanez-Perpina, E, Moore, J.M.R, Mar, E, Nguyen, P, Delgado-Rodrigues, E, Baxter, J.D, Buehrer, B.M, Webb, P, Fletterick, R.J, Guy, R.K.
Deposit date:2004-09-22
Release date:2005-01-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Molecular Mechanisms of Coactivator Utilization in Ligand-dependent Transactivation by the Androgen Receptor
J.Biol.Chem., 280, 2005
1XXR
DownloadVisualize
BU of 1xxr by Molmil
Structure of a mannose-specific jacalin-related lectin from Morus Nigra in complex with mannose
Descriptor: ACETIC ACID, GLYCEROL, SULFATE ION, ...
Authors:Rabijns, A, Barre, A, Van Damme, E.J.M, Peumans, W.J, De Ranter, C.J, Rouge, P.
Deposit date:2004-11-08
Release date:2005-10-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis of the jacalin-related lectin MornigaM from the black mulberry (Morus nigra) in complex with mannose
Febs J., 272, 2005
8FHL
DownloadVisualize
BU of 8fhl by Molmil
Structure of pyruvate dehydrogenase phosphatase regulatory subunit neoepitope presented by H2-Dd
Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-D alpha chain, ...
Authors:Custodio, J.M.F, Baker, B.M.
Deposit date:2022-12-14
Release date:2023-06-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.194 Å)
Cite:Structure of Pyruvate dehydrogenase phosphatase regulatory subunit neoepitope presented by H2-Dd
To Be Published
8FHU
DownloadVisualize
BU of 8fhu by Molmil
Structure of Pyruvate dehydrogenase phosphatase regulatory subunit epitope presented by H2-Dd
Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-D alpha chain, ...
Authors:Custodio, J.M.F, Baker, B.M.
Deposit date:2022-12-15
Release date:2023-06-28
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Structure of Pyruvate dehydrogenase phosphatase regulatory subunit neoepitope presented by H2-Dd
To Be Published
1XXQ
DownloadVisualize
BU of 1xxq by Molmil
Structure of a mannose-specific jacalin-related lectin from Morus nigra
Descriptor: ACETIC ACID, GLYCEROL, SULFATE ION, ...
Authors:Rabijns, A, Barre, A, Van Damme, E.J.M, Peumans, W.J, De Ranter, C.J, Rouge, P.
Deposit date:2004-11-08
Release date:2005-10-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of the jacalin-related lectin MornigaM from the black mulberry (Morus nigra) in complex with mannose
Febs J., 272, 2005
3F8F
DownloadVisualize
BU of 3f8f by Molmil
Crystal structure of multidrug binding transcriptional regulator LmrR complexed with Daunomycin
Descriptor: DAUNOMYCIN, Transcriptional regulator, PadR-like family
Authors:Madoori, P.K, Agustiandari, H, Driessen, A.J.M, Thunnissen, A.-M.W.H.
Deposit date:2008-11-12
Release date:2008-12-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the transcriptional regulator LmrR and its mechanism of multidrug recognition.
Embo J., 28, 2009
2AP2
DownloadVisualize
BU of 2ap2 by Molmil
SINGLE CHAIN FV OF C219 IN COMPLEX WITH SYNTHETIC EPITOPE PEPTIDE
Descriptor: P-GLYCOPROTEIN, SINGLE CHAIN FV
Authors:Van Den Elsen, J.M.H, Rose, D.R.
Deposit date:1999-03-22
Release date:1999-11-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Antibody C219 recognizes an alpha-helical epitope on P-glycoprotein.
Proc.Natl.Acad.Sci.USA, 96, 1999
8UX7
DownloadVisualize
BU of 8ux7 by Molmil
Dioclea megacarpa lectin (DmegA) complexed with X-Man
Descriptor: 5-bromo-4-chloro-1H-indol-3-yl alpha-D-mannopyranoside, CALCIUM ION, Dioclea megacarpa lectin, ...
Authors:Oliveira, M.V, De Sloover, G, Osterne, V.J.S, Pinto-Junior, V.R, Sacramento-Neto, J.C, Van Damme, E.J.M, Nascimento, K.S, Cavada, B.S.
Deposit date:2023-11-09
Release date:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Dioclea megacarpa lectin (DmegA) complexed with X-Man
To Be Published
7SGD
DownloadVisualize
BU of 7sgd by Molmil
Lassa virus glycoprotein construct(Josiah GPCysR4) recovered from GPC-I53-50 nanoparticle by localized reconstruction
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Antanasijevic, A, Brouwer, P.J.M, Ward, A.B.
Deposit date:2021-10-05
Release date:2022-10-12
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:Lassa virus glycoprotein nanoparticles elicit neutralizing antibody responses and protection.
Cell Host Microbe, 30, 2022
8YX9
DownloadVisualize
BU of 8yx9 by Molmil
CD40 in complex with Dacetuzumab Fab
Descriptor: Dacetuzumab, Heavy chain, light chain, ...
Authors:Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K.
Deposit date:2024-04-02
Release date:2024-05-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of human CD40 in complex with monoclonal antibodies dacetuzumab and bleselumab.
Biochem.Biophys.Res.Commun., 714, 2024
8YX1
DownloadVisualize
BU of 8yx1 by Molmil
CD40 in complex with Bleselumab Fab
Descriptor: Bleselumab, heavy chain, light chain, ...
Authors:Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K.
Deposit date:2024-04-01
Release date:2024-05-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of human CD40 in complex with monoclonal antibodies dacetuzumab and bleselumab.
Biochem.Biophys.Res.Commun., 714, 2024
7AD6
DownloadVisualize
BU of 7ad6 by Molmil
Crystal structure of human complement C5 in complex with the K92 bovine knob domain peptide.
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CYSTEINE, ...
Authors:Macpherson, A, van den Elsen, J.M.H, Schulze, M.E, Birtley, J.R.
Deposit date:2020-09-14
Release date:2021-03-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The allosteric modulation of Complement C5 by knob domain peptides.
Elife, 10, 2021
7AD7
DownloadVisualize
BU of 7ad7 by Molmil
Crystal structure of human complement C5 in complex with the K8 bovine knob domain peptide.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Macpherson, A, van den Elsen, J.M.H, Schulze, M.E, Birtley, J.R.
Deposit date:2020-09-14
Release date:2021-03-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The allosteric modulation of Complement C5 by knob domain peptides.
Elife, 10, 2021
4HMN
DownloadVisualize
BU of 4hmn by Molmil
Crystal structure of human 17beta-hydroxysteroid dehydrogenase type 5 in complex with (4-(4-Chlorophenyl)piperazin-1-yl)(morpholino)methanone (24)
Descriptor: 1,2-ETHANEDIOL, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Turnbull, A.P, Flanagan, J.U, Atwell, G.J, Heinrich, D.M, Jamieson, S.M.F, Brooke, D.G, Silva, S, Rigoreau, L.J.M, Trivier, E, Soudy, C, Samlal, S.S, Owen, P.J, Schroeder, E, Raynham, T, Denny, W.A.
Deposit date:2012-10-18
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Morpholylureas are a new class of potent and selective inhibitors of the type 5 17-beta-hydroxysteroid dehydrogenase (AKR1C3).
Bioorg.Med.Chem., 22, 2014
3OA9
DownloadVisualize
BU of 3oa9 by Molmil
Effector domain of influenza A/Duck/Albany/76 NS1
Descriptor: Non-structural protein 1
Authors:Kerry, P.S, Lewis, A, Hale, B.G, Hass, C, Taylor, M.A, Randall, R.E, Russell, R.J.M.
Deposit date:2010-08-05
Release date:2011-05-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A Transient Homotypic Interaction Model for the Influenza A Virus NS1 Protein Effector Domain.
Plos One, 6, 2011
5BPG
DownloadVisualize
BU of 5bpg by Molmil
Crystal structure of the water-soluble FraC purified starting from the trans-membrane pore
Descriptor: CHLORIDE ION, Fragaceatoxin C, GLYCEROL
Authors:Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
Deposit date:2015-05-28
Release date:2015-11-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Bidirectional Transformation of a Metamorphic Protein between the Water-Soluble and Transmembrane Native States
Biochemistry, 54, 2015
4KY1
DownloadVisualize
BU of 4ky1 by Molmil
humanized HP1/2 Fab
Descriptor: IMMUNOGLOBULIN IGG1 FAB, HEAVY CHAIN, LIGHT CHAIN
Authors:Arndt, J.W, Hanf, K.J.M, Lugovskoy, A, Chen, L.L, Jarpe, M, Boriack-Sjodin, A, Li, Y, van Vlijmen, H, Pepinsky, B, Taylor, F, Silvian, L, Taveras, A.
Deposit date:2013-05-28
Release date:2013-07-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Antibody humanization by redesign of complementarity-determining region residues proximate to the acceptor framework.
METHODS (SAN DIEGO), 65, 2014
4HTT
DownloadVisualize
BU of 4htt by Molmil
Crystal Structure of Twin Arginine Translocase Receptor- TatC in DDM
Descriptor: Sec-independent protein translocase protein TatC, Lysozyme
Authors:Ramasamy, S, Suloway, C.J.M, Clemons Jr, W.M.
Deposit date:2012-11-01
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (6.8 Å)
Cite:The Glove-like Structure of the Conserved Membrane Protein TatC Provides Insight into Signal Sequence Recognition in Twin-Arginine Translocation.
Structure, 21, 2013
3O9S
DownloadVisualize
BU of 3o9s by Molmil
Effector domain of influenza A/PR/8/34 NS1
Descriptor: Nonstructural protein 1
Authors:Kerry, P.S, Lewis, A, Hale, B.G, Hass, C, Taylor, M.A, Randall, R.E, Russell, R.J.M.
Deposit date:2010-08-04
Release date:2011-05-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:A Transient Homotypic Interaction Model for the Influenza A Virus NS1 Protein Effector Domain.
Plos One, 6, 2011

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon