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PDB: 2996 results

2JKH
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Factor Xa - cation inhibitor complex
Descriptor: 3-[(3~{a}~{S},4~{R},8~{a}~{S},8~{b}~{R})-4-[5-(5-chloranylthiophen-2-yl)-1,2-oxazol-3-yl]-1,3-bis(oxidanylidene)-4,6,7,8,8~{a},8~{b}-hexahydro-3~{a}~{H}-pyrrolo[3,4-a]pyrrolizin-2-yl]propyl-trimethyl-azanium, ACTIVATED FACTOR XA HEAVY CHAIN, CALCIUM ION, ...
Authors:Salonen, L.M, Bucher, C, Banner, D.W, Benz, J, Haap, W, Mary, J.L, Schweizer, W.B, Seiler, P, Kuster, O, Diederich, F.
Deposit date:2008-08-28
Release date:2009-01-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Cation-Pi Interactions at the Active Site of Factor Xa: Dramatic Enhancement Upon Stepwise N-Alkylation of Ammonium Ions.
Angew.Chem.Int.Ed.Engl., 48, 2009
2HRS
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Crystal structure of L42H V224H design intermediate for GFP metal ion reporter
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
Authors:Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-07-20
Release date:2008-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter
To be Published
2JK7
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XIAP BIR3 bound to a Smac Mimetic
Descriptor: (3S,6S,7Z,10AS)-N-(DIPHENYLMETHYL)-6-{[(2S)-2-(METHYLIDENEAMINO)BUTANOYL]AMINO}-5-OXO-1,2,3,5,6,9,10,10A-OCTAHYDROPYRROLO[1,2-A]AZOCINE-3-CARBOXAMIDE, BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 4, ZINC ION
Authors:Saito, N.G, Meagher, J.L, Stuckey, J.A.
Deposit date:2008-08-21
Release date:2008-11-04
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Structure-Based Design, Synthesis, Evaluation, and Crystallographic Studies of Conformationally Constrained Smac Mimetics as Inhibitors of the X-Linked Inhibitor of Apoptosis Protein (Xiap).
J.Med.Chem., 51, 2008
2JQZ
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Solution Structure of the C2 domain of human Smurf2
Descriptor: E3 ubiquitin-protein ligase SMURF2
Authors:Wiesner, S, Ogunjimi, A.A, Wang, H, Rotin, D, Sicheri, F, Wrana, J.L, Forman-Kay, J.D.
Deposit date:2007-06-15
Release date:2007-09-11
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Autoinhibition of the HECT-Type Ubiquitin Ligase Smurf2 through Its C2 Domain
Cell(Cambridge,Mass.), 130, 2007
2JJ4
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The complex of PII and acetylglutamate kinase from Synechococcus elongatus PCC7942
Descriptor: ACETYLGLUTAMATE KINASE, N-ACETYL-L-GLUTAMATE, NITROGEN REGULATORY PROTEIN P-II
Authors:Llacer, J.L, Marco-Marin, C, Gil-Ortiz, F, Fita, I, Rubio, V.
Deposit date:2007-07-04
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.46 Å)
Cite:The Crystal Structure of the Complex of Pii and Acetylglutamate Kinase Reveals How Pii Controls the Storage of Nitrogen as Arginine
Proc.Natl.Acad.Sci.USA, 104, 2007
2JWN
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Solution NMR structure of the protease-resistent domain of Xenopus laevis ePABP2
Descriptor: Embryonic polyadenylate-binding protein 2-B
Authors:Song, J, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-10-16
Release date:2007-10-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural basis for RNA recognition by a type II poly(A)-binding protein.
Proc.Natl.Acad.Sci.USA, 105, 2008
2K2N
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Solution structure of a cyanobacterial phytochrome GAF domain in the red light-absorbing ground state
Descriptor: PHYCOCYANOBILIN, Sensor protein
Authors:Cornilescu, C.C, Cornilescu, G, Ulijasz, A.T, Vierstra, R.D, Markley, J.L.
Deposit date:2008-04-04
Release date:2008-09-23
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of a cyanobacterial phytochrome GAF domain in the red-light-absorbing ground state.
J.Mol.Biol., 383, 2008
2F1G
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Cathepsin S in complex with non-covalent 2-(Benzoxazol-2-ylamino)-acetamide
Descriptor: Cathepsin S, GLYCEROL, N~2~-1,3-BENZOXAZOL-2-YL-3-CYCLOHEXYL-N-{2-[(4-METHOXYPHENYL)AMINO]ETHYL}-L-ALANINAMIDE
Authors:Spraggon, G, Hornsby, M, Lesley, S.A, Tully, D.C, Harris, J.L, Karenewsky, D.S, Kulathila, R, Clark, K.
Deposit date:2005-11-14
Release date:2006-04-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Synthesis and evaluation of arylaminoethyl amides as noncovalent inhibitors of cathepsin S. Part 3: Heterocyclic P3.
Bioorg.Med.Chem.Lett., 16, 2006
2FA0
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HMG-CoA synthase from Brassica juncea in complex with HMG-CoA and covalently bound to HMG-CoA
Descriptor: 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A, HMG-CoA synthase
Authors:Pojer, F, Ferrer, J.L, Richard, S.B, Noel, J.P.
Deposit date:2005-12-06
Release date:2006-07-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural basis for the design of potent and species-specific inhibitors of 3-hydroxy-3-methylglutaryl CoA synthases.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2FFT
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NMR structure of Spinach Thylakoid Soluble Phosphoprotein of 9 kDa in SDS Micelles
Descriptor: thylakoid soluble phosphoprotein
Authors:Song, J, Carlberg, I, Lee, M.S, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-12-20
Release date:2006-01-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Micelle-induced folding of spinach thylakoid soluble phosphoprotein of 9 kDa and its functional implications.
Biochemistry, 45, 2006
2FL7
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S. cerevisiae Sir3 BAH domain
Descriptor: Regulatory protein SIR3
Authors:Keck, J.L, Hou, Z, Daner, J.R, Fox, C.A.
Deposit date:2006-01-05
Release date:2006-05-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the Sir3 protein bromo adjacent homology (BAH) domain from S. cerevisiae at 1.95 A resolution.
Protein Sci., 15, 2006
2ETT
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Solution Structure of Human Sorting Nexin 22 PX Domain
Descriptor: Sorting nexin-22
Authors:Song, J, Zhao, Q, Tyler, R.C, Lee, M.S, Newman, C.L, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-10-27
Release date:2005-11-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of human sorting nexin 22.
Protein Sci., 16, 2007
2JWQ
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G-quadruplex recognition by quinacridines: a SAR, NMR and Biological study
Descriptor: DNA (5'-D(*DTP*DTP*DAP*DGP*DGP*DGP*DT)-3'), N,N'-(dibenzo[b,j][1,7]phenanthroline-2,10-diyldimethanediyl)dipropan-1-amine
Authors:Hounsou, C, Guittat, L, Monchaud, D, Jourdan, M, Saettel, N, Mergny, J.L, Teulade-Fichou, M.
Deposit date:2007-10-23
Release date:2008-03-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:G-Quadruplex Recognition by Quinacridines: a SAR, NMR, and Biological Study
ChemMedChem, 2, 2007
2K1D
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NMR Studies of a Pathogenic Mutant (D178N) of the Human Prion Protein
Descriptor: Major prion protein
Authors:Mills, J.L, Surewicz, K, Surewicz, W.K, Sonnichsen, F.D.
Deposit date:2008-02-29
Release date:2009-03-03
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Residue 129 polymorphism and conformational dynamics of familial prion diseases associated with the human prion protein variant D178N
To be Published
2GJ2
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Crystal Structure of VP9 from White Spot Syndrome Virus
Descriptor: CADMIUM ION, wsv230
Authors:Liu, Y, Wu, J.L, Song, J.X, Sivaraman, J, Hew, C.L.
Deposit date:2006-03-30
Release date:2006-09-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Identification of a Novel Nonstructural Protein, VP9, from White Spot Syndrome Virus: Its Structure Reveals a Ferredoxin Fold with Specific Metal Binding Sites
J.Virol., 80, 2006
2H59
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Sir2 H116A-deacetylated p53 peptide-3'-o-acetyl ADP ribose
Descriptor: (2S,3S,4R,5S)-2-({[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]OXY}METHYL)-4,5-DIHYDROXYTETRAHYDROFURAN-3-YL ACETATE, ADENOSINE-5-DIPHOSPHORIBOSE, Cellular tumor antigen p53, ...
Authors:Hoff, K.G, Avalos, J.L, Sens, K, Wolberger, C.
Deposit date:2006-05-25
Release date:2006-09-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights into the Sirtuin Mechanism from Ternary Complexes Containing NAD(+) and Acetylated Peptide.
Structure, 14, 2006
2HFK
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Pikromycin thioesterase in complex with product 10-deoxymethynolide
Descriptor: (3R,4S,5S,7R,9E,11R,12R)-12-ETHYL-4-HYDROXY-3,5,7,11-TETRAMETHYLOXACYCLODODEC-9-ENE-2,8-DIONE, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
Authors:Akey, D.L, Kittendorf, J.D, Giraldes, J.W, Fecik, R.A, Sherman, D.H, Smith, J.L.
Deposit date:2006-06-24
Release date:2006-09-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural Basis for Macrolactonization by the Pikromycin Thioesterase
NAT.CHEM.BIOL., 2, 2006
2GW6
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NMR structure of the human tRNA endonuclease SEN15 subunit
Descriptor: tRNA-splicing endonuclease subunit Sen15
Authors:Song, J, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2006-05-03
Release date:2006-05-16
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Three-dimensional structure determined for a subunit of human tRNA splicing endonuclease (Sen15) reveals a novel dimeric fold.
J.Mol.Biol., 366, 2007
2GPB
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COMPARISON OF THE BINDING OF GLUCOSE AND GLUCOSE-1-PHOSPHATE DERIVATIVES TO T-STATE GLYCOGEN PHOSPHORYLASE B
Descriptor: GLYCOGEN PHOSPHORYLASE B, PYRIDOXAL-5'-PHOSPHATE, alpha-D-glucopyranose
Authors:Martin, J.L, Johnson, L.N.
Deposit date:1990-06-04
Release date:1992-10-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Comparison of the binding of glucose and glucose 1-phosphate derivatives to T-state glycogen phosphorylase b.
Biochemistry, 29, 1990
2JER
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Agmatine deiminase of Enterococcus faecalis catalyzing its reaction.
Descriptor: AGMATINE DEIMINASE
Authors:Tavarez, S, Llacer, J.L, Rubio, V.
Deposit date:2007-01-19
Release date:2007-01-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Gene Cluster for Agmatine Catabolism of Enterococcus Faecalis: Study of Recombinant Putrescine Transcarbamylase and Agmatine Deiminase and a Snapshot of Agmatine Deiminase Catalyzing its Reaction.
J.Bacteriol., 189, 2007
2H4J
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Sir2-deacetylated peptide (from enzymatic turnover in crystal)
Descriptor: 2'-O-ACETYL ADENOSINE-5-DIPHOSPHORIBOSE, Cellular tumor antigen p53, NAD-dependent deacetylase, ...
Authors:Hoff, K.G, Avalos, J.L, Sens, K, Wolberger, C.
Deposit date:2006-05-24
Release date:2006-09-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Insights into the Sirtuin Mechanism from Ternary Complexes Containing NAD(+) and Acetylated Peptide.
Structure, 14, 2006
2JMU
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NMR structure of the mouse thiamine triphosphatase
Descriptor: Thiamine-triphosphatase
Authors:Song, J, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2006-12-05
Release date:2006-12-19
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structural basis for the catalytic mechanism of mammalian 25-kDa thiamine triphosphatase.
J.Biol.Chem., 283, 2008
2JO0
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The solution structure of the monomeric species of the C terminal domain of the CA protein of HIV-1
Descriptor: Gag-Pol polyprotein
Authors:Alcaraz, L.A, del Alamo, M, Barrera, F.N, Mateu, M.G, Neira, J.L.
Deposit date:2007-02-17
Release date:2007-07-31
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Flexibility in HIV-1 Assembly Subunits: Solution Structure of the Monomeric C-Terminal Domain of the Capsid Protein
Biophys.J., 93, 2007
2KAN
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Solution NMR structure of ubiquitin-like domain of Arabidopsis thaliana protein At2g32350. Northeast Structural Genomics Consortium target AR3433A
Descriptor: uncharacterized protein ar3433a
Authors:Eletsky, A, Mills, J.L, Sukumaran, D, Hua, J, Shastry, R, Jiang, M, Ciccosanti, C, Xiao, R, Liu, J, Everret, J.K, Swapna, G.V.T, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-11-11
Release date:2008-11-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution NMR structure of ubiquitin-like domain of Arabidopsis thaliana protein At2g32350.
To be Published
2KGQ
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Refined solution structure of des-pyro Glu brazzein
Descriptor: Brazzein
Authors:Cornilescu, C.C, Tonelli, M, DeRider, M.L, Markley, J.L, Assadi-Porter, F.M, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-03-13
Release date:2009-06-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Refined solution structure of des-pyro Glu brazzein
To be Published

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数据于2024-10-30公开中

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