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PDB: 42880 results

4HZ2
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BU of 4hz2 by Molmil
Crystal structure of glutathione s-transferase xaut_3756 (target efi-507152) from xanthobacter autotrophicus py2
Descriptor: BENZOIC ACID, GLUTATHIONE, Glutathione S-transferase domain, ...
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Al Obaidi, N.F, Stead, M, Love, J, Gerlt, J.A, Armstrong, R.N, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-11-14
Release date:2012-11-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of glutathione s-transferase xaut_3756 from xanthobacter autotrophicus py2
To be Published
8AMT
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BU of 8amt by Molmil
OBD-RepB pMV158 domain
Descriptor: CHLORIDE ION, GLYCEROL, MANGANESE (II) ION, ...
Authors:Machon, C, Amodio, J, Boer, R.D, Ruiz-Maso, J.A, del Solar, G, Coll, M.
Deposit date:2022-08-04
Release date:2023-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structures of pMV158 replication initiator RepB with and without DNA reveal a flexible dual-function protein.
Nucleic Acids Res., 51, 2023
8AFG
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BU of 8afg by Molmil
K352D oxalyl-CoA synthetase Pcs60p
Descriptor: Oxalate--CoA ligase, SULFATE ION
Authors:Burgi, J, Chojnowski, G, Wilmanns, M.
Deposit date:2022-07-17
Release date:2023-02-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Asymmetric horseshoe-like assembly of peroxisomal yeast oxalyl-CoA synthetase.
Biol.Chem., 404, 2023
8AMU
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BU of 8amu by Molmil
RepB pMV158 OBD domain bound to DDR region
Descriptor: DNA (5'-D(*AP*AP*AP*AP*GP*TP*CP*GP*CP*CP*GP*AP*AP*AP*AP*GP*TP*CP*GP*CP*CP*GP*A)-3'), DNA (5'-D(*TP*CP*GP*GP*CP*GP*AP*CP*TP*TP*TP*TP*CP*GP*GP*CP*GP*AP*CP*TP*TP*TP*T)-3'), MANGANESE (II) ION, ...
Authors:Amodio, J, Machon, C, Boer, R.D, Ruiz-Maso, J.A, del Solar, G, Coll, M.
Deposit date:2022-08-04
Release date:2023-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of pMV158 replication initiator RepB with and without DNA reveal a flexible dual-function protein.
Nucleic Acids Res., 51, 2023
6OCC
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BU of 6occ by Molmil
JAK2 JH2 in complex with JAK190
Descriptor: 2-[4-({5-amino-3-[(4-sulfamoylphenyl)amino]-1H-1,2,4-triazole-1-carbonyl}amino)phenyl]-1,3-oxazole-4-carboxylic acid, GLYCEROL, Tyrosine-protein kinase JAK2
Authors:Krimmer, S.G, Liosi, M.E, Schlessinger, J, Jorgensen, W.L.
Deposit date:2019-03-22
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Selective Janus Kinase 2 (JAK2) Pseudokinase Ligands with a Diaminotriazole Core.
J.Med.Chem., 63, 2020
3F5J
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BU of 3f5j by Molmil
Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-glucosidase, SULFATE ION, ...
Authors:Chuenchor, W, Ketudat Cairns, J.R, Pengthaisong, S, Robinson, R.C, Yuvaniyama, J, Chen, C.-J.
Deposit date:2008-11-03
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The structural basis of oligosaccharide binding by rice BGlu1 beta-glucosidase
J.Struct.Biol., 173, 2011
3WX6
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BU of 3wx6 by Molmil
Crystal structure of Type Six Secretion System protein
Descriptor: Uncharacterized protein
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2014-07-17
Release date:2015-03-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Extended Loop Region of Hcp1 is Critical for the Assembly and Function of Type VI Secretion System in Burkholderia pseudomallei.
Sci Rep, 5, 2015
3AGL
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BU of 3agl by Molmil
Complex of PKA with the bisubstrate protein kinase inhibitor ARC-1039
Descriptor: (10R,20R,23R)-1-[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]-20,23-bis(3-carbamimidamido propyl)-10-methyl-1,8,11,18,21-pentaoxo-2,9,12,19,22-pentaazatetracosan-24-amide, cAMP-dependent protein kinase catalytic subunit alpha
Authors:Pflug, A, Ragozina, J, Uri, A, Bossemeyer, D, Engh, R.A.
Deposit date:2010-04-02
Release date:2010-09-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Diversity of bisubstrate binding modes of adenosine analogue-oligoarginine conjugates in protein kinase a and implications for protein substrate interactions.
J.Mol.Biol., 403, 2010
7U6Z
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BU of 7u6z by Molmil
Pertussis toxin E129D NAD
Descriptor: IODIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Pertussis toxin subunit 1
Authors:Littler, D.R, Beddoe, T, Pulliainen, A, Rossjohn, J.
Deposit date:2022-03-06
Release date:2022-04-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.30002 Å)
Cite:Crystal structures of pertussis toxin with NAD + and analogs provide structural insights into the mechanism of its cytosolic ADP-ribosylation activity.
J.Biol.Chem., 298, 2022
8B0Q
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BU of 8b0q by Molmil
Deinococcus radiodurans UvrC C-terminal half
Descriptor: UvrABC system protein C
Authors:Timmins, J, Stelter, M.
Deposit date:2022-09-08
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional insights into the activation of the dual incision activity of UvrC, a key player in bacterial NER.
Nucleic Acids Res., 51, 2023
5TDJ
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BU of 5tdj by Molmil
RNA decamer duplex with four 2'-5'-linkages
Descriptor: RNA (5'-R(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3'), STRONTIUM ION
Authors:Luo, Z, Sheng, J.
Deposit date:2016-09-19
Release date:2017-01-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into RNA duplexes with multiple 2 -5 -linkages.
Nucleic Acids Res., 45, 2017
6OOL
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BU of 6ool by Molmil
Structural elucidation of the Ectodomain of mouse UNC5H2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Netrin receptor UNC5B, ...
Authors:Stetefeld, J, McDougall, M.D, Loewen, P.C, Moya, A, Meier, M.
Deposit date:2019-04-23
Release date:2020-04-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural elucidation of the Ectodomain of mouse UNC5H2
To be published
8AMV
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BU of 8amv by Molmil
RepB pMV158 hexamer
Descriptor: PHOSPHATE ION, Replication protein RepB, SODIUM ION
Authors:Machon, C, Amodio, J, Boer, R.D, Ruiz-Maso, J.A, del Solar, G, Coll, M.
Deposit date:2022-08-04
Release date:2023-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structures of pMV158 replication initiator RepB with and without DNA reveal a flexible dual-function protein.
Nucleic Acids Res., 51, 2023
5TKC
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BU of 5tkc by Molmil
Crystal structure of FBP aldolase from Toxoplasma gondii, ternary complex
Descriptor: 1,3-DIHYDROXYACETONEPHOSPHATE, Fructose-bisphosphate aldolase, GLYCERALDEHYDE-3-PHOSPHATE, ...
Authors:Heron, P.W, Sygusch, J.
Deposit date:2016-10-06
Release date:2017-10-04
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (1.779 Å)
Cite:Isomer activation controls stereospecificity of class I fructose-1,6-bisphosphate aldolases.
J. Biol. Chem., 292, 2017
2XCY
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BU of 2xcy by Molmil
Crystal structure of Aspergillus fumigatus sialidase
Descriptor: CHLORIDE ION, EXTRACELLULAR SIALIDASE/NEURAMINIDASE, PUTATIVE, ...
Authors:Telford, J.C, Yeung, J, Xu, G, Bennet, A, Moore, M.M, Taylor, G.L.
Deposit date:2010-04-27
Release date:2010-05-12
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:The Aspergillus Fumigatus Sialidase is a Kdnase: Structural and Mechanistic Insights.
J.Biol.Chem., 286, 2011
7U2R
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BU of 7u2r by Molmil
Structure of Paenibacillus sp. J14 Apyc1
Descriptor: Apyc1, ZINC ION
Authors:Hobbs, S.J, Wein, T, Lu, A, Morehouse, B.R, Schnabel, J, Sorek, R, Kranzusch, P.J.
Deposit date:2022-02-24
Release date:2022-04-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Phage anti-CBASS and anti-Pycsar nucleases subvert bacterial immunity.
Nature, 605, 2022
7TRD
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BU of 7trd by Molmil
Human telomerase catalytic core structure at 3.3 Angstrom
Descriptor: Telomerase RNA, partial sequence, Telomerase reverse transcriptase, ...
Authors:Liu, B, He, Y, Wang, Y, Song, H, Zhou, Z.H, Feigon, J.
Deposit date:2022-01-28
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of active human telomerase with telomere shelterin protein TPP1.
Nature, 604, 2022
4HOJ
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BU of 4hoj by Molmil
Crystal structure of glutathione transferase homolog from Neisseria Gonorrhoeae, target EFI-501841, with bound glutathione
Descriptor: ACETATE ION, CALCIUM ION, GLUTATHIONE, ...
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Armstrong, R.N, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-10-22
Release date:2012-11-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of glutathione transferase homolog from Neisseria Gonorrhoeae, target EFI-501841, with bound glutathione
To be Published
7TRE
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BU of 7tre by Molmil
Human telomerase catalytic core with shelterin protein TPP1
Descriptor: Adrenocortical dysplasia protein homolog, Telomerase RNA, partial sequence, ...
Authors:Liu, B, He, Y, Wang, Y, Song, H, Zhou, Z.H, Feigon, J.
Deposit date:2022-01-28
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of active human telomerase with telomere shelterin protein TPP1.
Nature, 604, 2022
7U2S
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BU of 7u2s by Molmil
Structure of Paenibacillus xerothermodurans Apyc1 in the apo state
Descriptor: Apyc1, ZINC ION
Authors:Hobbs, S.J, Wein, T, Lu, A, Morehouse, B.R, Schnabel, J, Sorek, R, Kranzusch, P.J.
Deposit date:2022-02-24
Release date:2022-04-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Phage anti-CBASS and anti-Pycsar nucleases subvert bacterial immunity.
Nature, 605, 2022
3O7A
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BU of 3o7a by Molmil
Crystal structure of PHF13 in complex with H3K4me3
Descriptor: GLYCEROL, H3K4ME3 HISTONE 11MER-PEPTIDE, PHD finger protein 13 variant, ...
Authors:Bian, C.B, Lam, R, Xu, C, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2010-07-30
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:PHF13 is a molecular reader and transcriptional co-regulator of H3K4me2/3.
Elife, 5, 2016
4N02
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BU of 4n02 by Molmil
Type 2 IDI from S. pneumoniae
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, Isopentenyl-diphosphate delta-isomerase, SULFATE ION
Authors:de Ruyck, J, Schubert, H.L, Poulter, C.D.
Deposit date:2013-09-30
Release date:2014-07-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Determination of Kinetics and the Crystal Structure of a Novel Type 2 Isopentenyl Diphosphate: Dimethylallyl Diphosphate Isomerase from Streptococcus pneumoniae.
Chembiochem, 15, 2014
2NMU
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BU of 2nmu by Molmil
Crystal structure of the hypothetical protein from Salmonella typhimurium LT2. Northeast Structural Genomics Consortium target StR127.
Descriptor: Putative DNA-binding protein
Authors:Kuzin, A.P, Abashidze, M, Seetharaman, J, Wang, H, Nwosu, C, Cunningham, K, Ma, L.C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-10-23
Release date:2006-11-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the hypothetical protein from Salmonella typhimurium LT2. Northeast Structural Genomics Consortium target StR127.
To be Published
6OA8
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BU of 6oa8 by Molmil
Superfolder Green Fluorescent Protein with 4-cyano-L-phenylalanine at the chromophore (position 66)
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, SODIUM ION, ...
Authors:Piacentini, J, Olenginski, G.M, Brewer, S.H, Phillips-Piro, C.M.
Deposit date:2019-03-15
Release date:2020-08-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Structural and spectrophotometric investigation of two unnatural amino-acid altered chromophores in the superfolder green fluorescent protein
Acta Crystallogr.,Sect.D, 2021
2IWA
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BU of 2iwa by Molmil
Unbound glutaminyl cyclotransferase from Carica papaya.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLUTAMINE CYCLOTRANSFERASE, ...
Authors:Guevara, T, Mallorqui-Fernandez, N, Garcia-Castellanos, R, Petersen, G.E, Lauritzen, C, Pedersen, J, Arnau, J, Gomis-Ruth, F.X, Sola, M.
Deposit date:2006-06-27
Release date:2006-07-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Papaya Glutamine Cyclotransferase Shows a Singular Five-Fold Beta-Propeller Architecture that Suggests a Novel Reaction Mechanism.
Biol.Chem., 387, 2006

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數據於2024-10-16公開中

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