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PDB: 42254 results

4FLV
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BU of 4flv by Molmil
Pyrococcus abyssi B family DNA polymerase bound to a dsDNA, in edition mode
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA polymerase 1, GLYCEROL, ...
Authors:Gouge, J, Delarue, M.
Deposit date:2012-06-15
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular Recognition of Canonical and Deaminated Bases by P. abyssi Family B DNA Polymerase.
J.Mol.Biol., 423, 2012
4FMU
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BU of 4fmu by Molmil
Crystal structure of Methyltransferase domain of human SET domain-containing protein 2 Compound: Pr-SNF
Descriptor: (2S,5S)-2-amino-6-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]-5-(propylamino)hexanoic acid, Histone-lysine N-methyltransferase SETD2, UNKNOWN ATOM OR ION, ...
Authors:Dong, A, Zeng, H, Ibanez, G, Zheng, W, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Min, J, Luo, M, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2012-06-18
Release date:2012-09-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Sinefungin Derivatives as Inhibitors and Structure Probes of Protein Lysine Methyltransferase SETD2.
J.Am.Chem.Soc., 134, 2012
4OBS
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BU of 4obs by Molmil
Crystal structure of human alpha-L-iduronidase in the P212121 form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-L-iduronidase, CHLORIDE ION, ...
Authors:Bie, H, Yin, J, He, X, Kermode, A.R, James, M.N.G.
Deposit date:2014-01-07
Release date:2015-01-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal structure of human alpha-L-iduronidase in the P212121 form
To be Published
4OCW
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BU of 4ocw by Molmil
Crystal structure of human Fab CAP256-VRC26.06, a potent V1V2-directed HIV-1 neutralizing antibody
Descriptor: CAP256-VRC26.06 heavy chain, CAP256-VRC26.06 light chain
Authors:Gorman, J, Doria-Rose, N.A, Schramm, C.A, Moore, P.L, Mascola, J.R, Shapiro, L, Morris, L, Kwong, P.D.
Deposit date:2014-01-09
Release date:2014-02-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies.
Nature, 509, 2014
4FC6
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BU of 4fc6 by Molmil
Studies on DCR shed new light on peroxisomal beta-oxidation: Crystal structure of the ternary complex of pDCR
Descriptor: HEXANOYL-COENZYME A, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Peroxisomal 2,4-dienoyl-CoA reductase
Authors:Hua, T, Wu, D, Wang, J, Shaw, N, Liu, Z.-J.
Deposit date:2012-05-24
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Studies of human 2,4-dienoyl CoA reductase shed new light on peroxisomal beta-oxidation of unsaturated fatty acids
J.Biol.Chem., 287, 2012
4FD5
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BU of 4fd5 by Molmil
Crystal structure of arylalkylamine N-Acetyltransferase 2 from Aedes aegypti
Descriptor: IODIDE ION, arylalkylamine N-Acetyltransferase 2
Authors:Han, Q, Robinson, R, Li, J.
Deposit date:2012-05-26
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Evolution of insect arylalkylamine N-acetyltransferases: structural evidence from the yellow fever mosquito, Aedes aegypti.
Proc.Natl.Acad.Sci.USA, 109, 2012
4OM8
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BU of 4om8 by Molmil
Crystal structure of 5-formly-3-hydroxy-2-methylpyridine 4-carboxylic acid (FHMPC) 5-dehydrogenase, an NAD+ dependent dismutase.
Descriptor: 3-hydroxybutyryl-coA dehydrogenase, ACETATE ION, BETA-MERCAPTOETHANOL, ...
Authors:Mugo, A.N, Kobayashi, J, Mikami, B, Yagi, T, Ohnishi, K.
Deposit date:2014-01-27
Release date:2015-01-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylic acid 5-dehydrogenase, an NAD(+)-dependent dismutase from Mesorhizobium loti
Biochem.Biophys.Res.Commun., 456, 2015
4OEP
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BU of 4oep by Molmil
Crystal structure of the ZO-1 PDZ1 domain in complex with the 7-mer Claudin1 C-terminal tail
Descriptor: ACETATE ION, DODECAETHYLENE GLYCOL, Tight junction protein ZO-1
Authors:Nomme, J, Lavie, A.
Deposit date:2014-01-13
Release date:2015-01-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Basis of a Key Factor Regulating the Affinity between the Zonula Occludens First PDZ Domain and Claudins.
J.Biol.Chem., 290, 2015
4FD4
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BU of 4fd4 by Molmil
Crystal structure of mosquito arylalkylamine N-Acetyltransferase like 5b
Descriptor: GLYCEROL, arylalkylamine N-Acetyltransferase like 5b
Authors:Han, Q, Robinson, R, Li, J.
Deposit date:2012-05-26
Release date:2012-06-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Evolution of insect arylalkylamine N-acetyltransferases: structural evidence from the yellow fever mosquito, Aedes aegypti.
Proc.Natl.Acad.Sci.USA, 109, 2012
4OO4
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BU of 4oo4 by Molmil
Crystal Structure of Human Thioredoxin Mutant
Descriptor: Thioredoxin
Authors:The, J, Weichsel, A, Montfort, W.R.
Deposit date:2014-01-30
Release date:2014-02-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Crystal Structure of a Thioredoxin Mutant Displays a Dynamic N-terminal Loop Surrounding an S-nitrosation Site
To be Published
4OPN
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BU of 4opn by Molmil
Crystal structure of mouse glyoxalase I complexed with mAH
Descriptor: L-gamma-glutamyl-N-(3-ethynylphenyl)-N-hydroxy-L-glutaminylglycine, Lactoylglutathione lyase, ZINC ION
Authors:Zhai, J, Zhang, L, Yuan, M, Zhang, H.
Deposit date:2014-02-06
Release date:2015-02-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Reversible Inhibition of Glyoxalase I: Synthesis and Activity Evaluation
To be Published
8GOU
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BU of 8gou by Molmil
Omicron BA.4/5 SARS-CoV-2 S in complex with TH003 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, TH003 Fab heavy chain, ...
Authors:Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z.
Deposit date:2022-08-25
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection.
Nat Commun, 14, 2023
6Q8W
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BU of 6q8w by Molmil
Respiratory complex I from Thermus thermophilus with bound Aureothin.
Descriptor: Aureothin, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Gutierrez-Fernandez, J, Minhas, G.S, Sazanov, L.A.
Deposit date:2018-12-16
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
1MD7
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BU of 1md7 by Molmil
Monomeric structure of the zymogen of complement protease C1r
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, C1R COMPLEMENT SERINE PROTEASE
Authors:Budayova-Spano, M, Grabarse, W, Thielens, N.M, Hillen, H, Lacroix, M, Schmidt, M, Fontecilla-Camps, J, Arlaud, G.J, Gaboriaud, C.
Deposit date:2002-08-07
Release date:2003-08-07
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Monomeric structures of the zymogen and active catalytic domain of complement protease c1r: further insights into the c1 activation mechanism
Structure, 10, 2002
6QF9
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BU of 6qf9 by Molmil
Structure of an anti-Mcl1 scFv
Descriptor: scFv
Authors:Luptak, J.
Deposit date:2019-01-09
Release date:2019-11-06
Last modified:2019-11-13
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Antibody fragments structurally enable a drug-discovery campaign on the cancer target Mcl-1.
Acta Crystallogr D Struct Biol, 75, 2019
1MLY
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BU of 1mly by Molmil
Crystal Structure of 7,8-Diaminopelargonic Acid Synthase in complex with the cis isomer of amiclenomycin
Descriptor: 7,8-diamino-pelargonic acid aminotransferase, CIS-AMICLENOMYCIN, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Sandmark, J, Mann, S, Marquet, A, Schneider, G.
Deposit date:2002-09-02
Release date:2002-12-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural basis for the inhibition of the biosynthesis of biotin by the antibiotic amiclenomycin
J.Biol.Chem., 277, 2002
6QCZ
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BU of 6qcz by Molmil
MloK1 model from single particle analysis of 2D crystals, class 3 (intermediate extended conformation)
Descriptor: Cyclic nucleotide-gated potassium channel mll3241, POTASSIUM ION
Authors:Righetto, R, Biyani, N, Kowal, J, Chami, M, Stahlberg, H.
Deposit date:2018-12-31
Release date:2019-04-24
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Retrieving high-resolution information from disordered 2D crystals by single-particle cryo-EM.
Nat Commun, 10, 2019
6QD3
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BU of 6qd3 by Molmil
MloK1 model from single particle analysis of 2D crystals, class 7 (intermediate conformation)
Descriptor: Cyclic nucleotide-gated potassium channel mll3241, POTASSIUM ION
Authors:Righetto, R, Biyani, N, Kowal, J, Chami, M, Stahlberg, H.
Deposit date:2018-12-31
Release date:2019-04-24
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Retrieving high-resolution information from disordered 2D crystals by single-particle cryo-EM.
Nat Commun, 10, 2019
1MP5
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BU of 1mp5 by Molmil
Y177F VARIANT OF S. ENTERICA RmlA
Descriptor: URIDINE-5'-DIPHOSPHATE-GLUCOSE, Y177F VARIANT OF S. ENTERICA RmlA BOUND TO UDP-GLUCOSE
Authors:Barton, W.A, Biggins, J.B, Jiang, J, Thorson, J.S, Nikolov, D.B.
Deposit date:2002-09-11
Release date:2002-10-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Expanding pyrimidine diphosphosugar libraries via structure-based nucleotidylyltransferase engineering
Proc.Natl.Acad.Sci.USA, 99, 2002
6QF6
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BU of 6qf6 by Molmil
Structure of an E.coli expressed anti-Mcl1 scFv
Descriptor: E.coli expressed scFv
Authors:Luptak, J.
Deposit date:2019-01-09
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structure of an E.coli expressed anti-Mcl1 scFv
To Be Published
6QJP
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BU of 6qjp by Molmil
Cryo-EM structure of heparin-induced 2N4R tau jagged filaments
Descriptor: Microtubule-associated protein tau
Authors:Zhang, W, Falcon, B, Murzin, A.G, Fan, J, Crowther, R.A, Goedert, M, Scheres, S.H.W.
Deposit date:2019-01-24
Release date:2019-02-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Heparin-induced tau filaments are polymorphic and differ from those in Alzheimer's and Pick's diseases.
Elife, 8, 2019
1MMU
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BU of 1mmu by Molmil
Crystal structure of galactose mutarotase from Lactococcus lactis complexed with D-glucose
Descriptor: Aldose 1-epimerase, SODIUM ION, beta-D-glucopyranose
Authors:Thoden, J.B, Kim, J, Raushel, F.M, Holden, H.M.
Deposit date:2002-09-04
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and kinetic studies of sugar binding to galactose mutarotase from Lactococcus lactis.
J.Biol.Chem., 277, 2002
1M1L
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BU of 1m1l by Molmil
Human Suppressor of Fused (N-terminal domain)
Descriptor: Suppressor of Fused
Authors:Merchant, M, Vajdos, F.F, Ultsch, M, Maun, H.R, Wendt, U, Cannon, J, Lazarus, R.A, de Vos, A.M, de Sauvage, F.J.
Deposit date:2002-06-19
Release date:2004-02-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Suppressor of fused regulates Gli activity through a dual binding mechanism
Mol.Cell.Biol., 24, 2004
1M20
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BU of 1m20 by Molmil
Crystal Structure of F35Y Mutant of Trypsin-solubilized Fragment of Cytochrome b5
Descriptor: Cytochrome b5, PROTOPORPHYRIN IX CONTAINING FE
Authors:Yao, P, Wu, J, Wang, Y.-H, Sun, B.-Y, Xia, Z.-X, Huang, Z.-X.
Deposit date:2002-06-20
Release date:2002-09-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystallography, CD and kinetic studies revealed the essence of the abnormal behaviors of the cytochrome b5 Phe35-->Tyr mutant.
Eur.J.Biochem., 269, 2002
1M3K
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BU of 1m3k by Molmil
biosynthetic thiolase, inactive C89A mutant
Descriptor: Acetyl-CoA acetyltransferase, GLYCEROL, SULFATE ION
Authors:Kursula, P, Ojala, J, Lambeir, A.-M, Wierenga, R.K.
Deposit date:2002-06-28
Release date:2002-11-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The catalytic cycle of biosynthetic thiolase: A conformational journey of an acetyl group through four binding modes and two oxyanion holes
Biochemistry, 41, 2002

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