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PDB: 42254 results

5VKK
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BU of 5vkk by Molmil
Crystal structure of Fab fragment of anti-CD22 Epratuzumab
Descriptor: Epratuzumab Fab Heavy Chain, Epratuzumab Fab Light Chain
Authors:Sicard, T, Ereno-Orbea, J, Julien, J.P.
Deposit date:2017-04-21
Release date:2017-10-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.014 Å)
Cite:Molecular basis of human CD22 function and therapeutic targeting.
Nat Commun, 8, 2017
2Y0H
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BU of 2y0h by Molmil
Crystal Structure of Pseudomonas Aeruginosa OpdL
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, PROBABLE PORIN
Authors:Touw, D.S, Vijayaraghavan, J, Vandenberg, B.
Deposit date:2010-12-02
Release date:2011-12-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Pseudomonas Aeruginosa Opdl
To be Published
2XO5
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BU of 2xo5 by Molmil
RIBONUCLEOTIDE REDUCTASE Y731NH2Y MODIFIED R1 SUBUNIT OF E. COLI
Descriptor: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA
Authors:Minnihan, E.C, Seyedsayamdost, M.R, Uhlin, U, Stubbe, J.
Deposit date:2010-08-09
Release date:2010-08-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Kinetics of Radical Intermediate Formation and Deoxynucleotide Production in 3-Aminotyrosine- Substituted Escherichia Coli Ribonucleotide Reductases.
J.Am.Chem.Soc., 133, 2011
2XR0
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BU of 2xr0 by Molmil
Room temperature X-ray structure of the perdeuterated Toho-1 R274N R276N double mutant beta-lactamase
Descriptor: SULFATE ION, TOHO-1 BETA-LACTAMASE
Authors:Tomanicek, S.J, Wang, K.K, Weiss, K.L, Blakeley, M.P, Cooper, J, Chen, Y, Coates, L.
Deposit date:2010-09-08
Release date:2010-12-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Active Site Protonation States of Perdeuterated Toho-1 Beta-Lactamase Determined by Neutron Diffraction Support a Role for Glu166 as the General Base in Acylation.
FEBS Lett., 585, 2011
5VNM
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BU of 5vnm by Molmil
Crystal structure of Sec23a/Sec24a/Sec22 complexed with 4-phenylbutyric acid (15mM soaking)
Descriptor: 4-PHENYL-BUTANOIC ACID, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
Authors:Ma, W, Goldberg, J.
Deposit date:2017-04-30
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.765 Å)
Cite:ER retention is imposed by COPII protein sorting and attenuated by 4-phenylbutyrate.
Elife, 6, 2017
3GW2
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BU of 3gw2 by Molmil
Crystal structure of possible transcriptional regulatory protein (fragment 1-100) from Mycobacterium bovis. Northeast Structural Genomics Consortium Target MbR242E.
Descriptor: Possible transcriptional regulatory arsR-family protein
Authors:Kuzin, A.P, Su, M, Seetharaman, J, Mao, M, Xiao, R, Ciccosanti, C, Wang, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-03-31
Release date:2009-04-21
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Northeast Structural Genomics Consortium Target MbR242E
To be published
2XSX
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BU of 2xsx by Molmil
Crystal structure of human beta enolase ENOB
Descriptor: 1,2-ETHANEDIOL, BETA-ENOLASE, MAGNESIUM ION, ...
Authors:Vollmar, M, Krysztofinska, E, Chaikuad, A, Krojer, T, Cocking, R, von Delft, F, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A, Yue, W.W, Oppermann, U.
Deposit date:2010-09-30
Release date:2010-11-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Human Beta Enolase Enob
To be Published
5VOX
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BU of 5vox by Molmil
Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 1)
Descriptor: V-type proton ATPase catalytic subunit A,V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
Authors:Zhao, J.
Deposit date:2017-05-03
Release date:2017-06-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Molecular basis for the binding and modulation of V-ATPase by a bacterial effector protein.
PLoS Pathog., 13, 2017
3H8Q
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BU of 3h8q by Molmil
Crystal structure of glutaredoxin domain of human thioredoxin reductase 3
Descriptor: CHLORIDE ION, SULFATE ION, Thioredoxin reductase 3
Authors:Chaikuad, A, Johansson, C, Ugochukwu, E, Roos, A.K, von Delft, F, Pilka, E, Yue, W, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2009-04-29
Release date:2009-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of glutaredoxin domain of human thioredoxin reductase 3
To be Published
5VRK
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BU of 5vrk by Molmil
Crystal structure of SsoPox AsA6 mutant (F46L-C258A-W263M-I280T) - open form
Descriptor: 1,2-ETHANEDIOL, Aryldialkylphosphatase, COBALT (II) ION, ...
Authors:Hiblot, J, Gotthard, G, Jacquet, P, Daude, D, Bergonzi, C, Chabriere, E, Elias, M.
Deposit date:2017-05-10
Release date:2018-01-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Rational engineering of a native hyperthermostable lactonase into a broad spectrum phosphotriesterase.
Sci Rep, 7, 2017
5VT0
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BU of 5vt0 by Molmil
Escherichia coli 6S RNA derivative in complex with Escherichia coli RNA polymerase sigma70-holoenzyme
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Chen, J, Darst, S.A.
Deposit date:2017-05-15
Release date:2017-11-01
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.78 Å)
Cite:6S RNA Mimics B-Form DNA to Regulate Escherichia coli RNA Polymerase.
Mol. Cell, 68, 2017
2Y2W
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BU of 2y2w by Molmil
Elucidation of the substrate specificity and protein structure of AbfB, a family 51 alpha-L-arabinofuranosidase from Bifidobacterium longum.
Descriptor: ARABINOFURANOSIDASE
Authors:Lagaert, S, Schoepe, J, Delcour, J.A, Lavigne, R, Strelkov, S.V, Courtin, C.M, Mikkelsen, N.E, Sandgren, M, Volckaert, G.
Deposit date:2010-12-16
Release date:2011-12-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Elucidation of the Substrate Specificity and Protein Structure of Abfb, a Family 51 Alpha-L- Arabinofuranosidase from Bifidobacterium Longum.
To be Published
2XMR
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BU of 2xmr by Molmil
Crystal structure of human NDRG2 protein provides insight into its role as a tumor suppressor
Descriptor: ACETATE ION, CALCIUM ION, GLYCEROL, ...
Authors:Hwang, J, Kim, Y, Lee, H, Kim, M.H.
Deposit date:2010-07-29
Release date:2011-01-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Human Ndrg2 Protein Provides Insight Into its Role as a Tumor Suppressor.
J.Biol.Chem., 286, 2011
2XYR
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BU of 2xyr by Molmil
Crystal structure of the nsp16 nsp10 SARS coronavirus complex
Descriptor: CHLORIDE ION, MAGNESIUM ION, NON-STRUCTURAL PROTEIN 10, ...
Authors:Decroly, E, Debarnot, C, Ferron, F, Bouvet, M, Coutard, B, Imbert, I, Gluais, L, Papageorgiou, N, Ortiz-Lombardia, M, Lescar, J, Canard, B.
Deposit date:2010-11-18
Release date:2011-10-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure and Functional Analysis of the Sars-Coronavirus RNA CAP 2'-O-Methyltransferase Nsp10/Nsp16 Complex.
Plos Pathog., 7, 2011
4TVX
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BU of 4tvx by Molmil
Crystal structure of the E. coli CRISPR RNA-guided surveillance complex, Cascade
Descriptor: CRISPR system Cascade subunit CasA, CRISPR system Cascade subunit CasB, CRISPR system Cascade subunit CasC, ...
Authors:Jackson, R.N, Golden, S.M, Carter, J, Wiedenheft, B.
Deposit date:2014-06-28
Release date:2014-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Structural biology. Crystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coli.
Science, 345, 2014
5VGD
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BU of 5vgd by Molmil
Crystal Structure of HLA-C*0501 in complex with SAE
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, Cw-5 alpha chain, ...
Authors:Gras, S, Rossjohn, J.
Deposit date:2017-04-11
Release date:2017-05-31
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural and regulatory diversity shape HLA-C protein expression levels.
Nat Commun, 8, 2017
2XZ4
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BU of 2xz4 by Molmil
Crystal structure of the LFZ ectodomain of the peptidoglycan recognition protein LF
Descriptor: 1,2-ETHANEDIOL, 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, COPPER (II) ION, ...
Authors:Basbous, N, Coste, F, Leone, P, Vincentelli, R, Royet, J, Kellenberger, C, Roussel, A.
Deposit date:2010-11-23
Release date:2011-04-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The Drosophila Peptidoglycan-Recognition Protein Lf Interacts with Peptidoglycan-Recognition Protein Lc to Downregulate the Imd Pathway.
Embo Rep., 12, 2011
2XPC
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BU of 2xpc by Molmil
Second-generation sulfonamide inhibitors of MurD: Activity optimisation with conformationally rigid analogues of D-glutamic acid
Descriptor: (1R,3R,4S)-4-[({6-[(4-CYANO-2-FLUOROBENZYL)OXY]NAPHTHALEN-2-YL}SULFONYL)AMINO]CYCLOHEXANE-1,3-DICARBOXYLIC ACID, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Sosic, I, Barreteau, H, Simcic, M, Sink, R, Cesar, J, Golic-Grdadolnik, S, Contreras-Martel, C, Dessen, A, Amoroso, A, Joris, B, Blanot, D, Gobec, S.
Deposit date:2010-08-26
Release date:2011-05-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Second-Generation Sulfonamide Inhibitors of D- Glutamic Acid-Adding Enzyme: Activity Optimisation with Conformationally Rigid Analogues of D- Glutamic Acid.
Eur.J.Med.Chem, 46, 2011
3H8C
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BU of 3h8c by Molmil
A combined crystallographic and molecular dynamics study of cathepsin-L retro-binding inhibitors (compound 14)
Descriptor: Cathepsin L1, N-(biphenyl-4-ylacetyl)-S-methyl-L-cysteinyl-D-arginyl-N-(2-phenylethyl)-L-phenylalaninamide
Authors:Tulsidas, S.R, Chowdhury, S.F, Kumar, S, Joseph, L, Purisima, E.O, Sivaraman, J.
Deposit date:2009-04-29
Release date:2009-10-20
Last modified:2014-11-12
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Combined Crystallographic and Molecular Dynamics Study of Cathepsin L Retrobinding Inhibitors
J.Med.Chem., 2009
2Y1T
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BU of 2y1t by Molmil
Bacillus subtilis prophage dUTPase in complex with dUDP
Descriptor: DEOXYURIDINE-5'-DIPHOSPHATE, SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE YOSS
Authors:Garcia-Nafria, J, Harkiolaki, M, Persson, R, Fogg, M.J, Wilson, K.S.
Deposit date:2010-12-10
Release date:2011-02-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:The Structure of Bacillus Subtilis Sp Beta Prophage Dutpase and its Complexes with Two Nucleotides
Acta Crystallogr.,Sect.D, 67, 2011
3HA2
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BU of 3ha2 by Molmil
Crystal Structure of Protein (NADPH-quinone reductase) from P.pentosaceus, Northeast Structural Genomics Consortium Target PtR24A
Descriptor: DI(HYDROXYETHYL)ETHER, NADPH-quinone reductase, SULFATE ION
Authors:Kuzin, A, Su, M, Seetharaman, J, Sahdev, S, Xiao, R, Ciccosanti, C, Maglaqui, M, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-04-30
Release date:2009-05-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Northeast Structural Genomics Consortium Target PtR24A
To be Published
3HB7
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BU of 3hb7 by Molmil
The Crystal Structure of an Isochorismatase-like Hydrolase from Alkaliphilus metalliredigens to 2.3A
Descriptor: AMMONIUM ION, Isochorismatase hydrolase, SODIUM ION
Authors:Stein, A.J, Xu, X, Cui, H, Ng, J, Edwards, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-05-04
Release date:2009-07-07
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Crystal Structure of an Isochorismatase-like Hydrolase from Alkaliphilus metalliredigens to 2.3A
To be Published
2XVD
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BU of 2xvd by Molmil
ephB4 kinase domain inhibitor complex
Descriptor: EPHRIN TYPE-B RECEPTOR 4, MAGNESIUM ION, {4-METHYL-3-[(1-METHYLETHYL)(2-{[3-(METHYLSULFONYL)-5-MORPHOLIN-4-YLPHENYL]AMINO}PYRIMIDIN-4-YL)AMINO]PHENYL}METHANOL
Authors:Read, J, Brassington, C.A, Green, I, McCall, E.J, Valentine, A.L.
Deposit date:2010-10-25
Release date:2011-06-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Inhibitors of the Tyrosine Kinase Ephb4. Part 4: Discovery and Optimization of a Benzylic Alcohol Series.
Bioorg.Med.Chem.Lett., 21, 2011
2XWA
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BU of 2xwa by Molmil
Crystal Structure of Complement Factor D Mutant R202A
Descriptor: COMPLEMENT FACTOR D, GLYCEROL
Authors:Forneris, F, Ricklin, D, Wu, J, Tzekou, A, Wallace, R.S, Lambris, J.D, Gros, P.
Deposit date:2010-11-01
Release date:2011-01-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of C3B in Complex with Factors B and D Give Insight Into Complement Convertase Formation.
Science, 330, 2010
5VNK
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BU of 5vnk by Molmil
Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal LL sorting motif
Descriptor: C-terminal LL, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
Authors:Ma, W, Goldberg, J.
Deposit date:2017-04-30
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:ER retention is imposed by COPII protein sorting and attenuated by 4-phenylbutyrate.
Elife, 6, 2017

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