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PDB: 42289 件

8B6T
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X-ray structure of the interface optimized haloalkane dehalogenase HaloTag7 fusion to the green fluorescent protein GFP (ChemoG5-TMR) labeled with a chloroalkane tetramethylrhodamine fluorophore substrate
分子名称: CHLORIDE ION, Green fluorescent protein,Haloalkane dehalogenase, [9-[2-carboxy-5-[2-[2-(6-chloranylhexoxy)ethoxy]ethylcarbamoyl]phenyl]-6-(dimethylamino)xanthen-3-ylidene]-dimethyl-azanium
著者Tarnawski, M, Hellweg, L, Hiblot, J.
登録日2022-09-27
公開日2023-07-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A general method for the development of multicolor biosensors with large dynamic ranges.
Nat.Chem.Biol., 19, 2023
8R1I
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Human Carbonic Anhydrase II (hCAII) in complex with (R)-N-(3-Indol-1-yl-2-methyl-propyl)-4-sulfamoyl-benzamide
分子名称: (R)-N-(3-INDOL-1-YL-2-METHYL-PROPYL)-4-SULFAMOYL-BENZAMIDE, Carbonic anhydrase 2, ZINC ION
著者Kotschy, J, Gasper, R, Linser, R.
登録日2023-11-02
公開日2023-12-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Microsecond Timescale Conformational Dynamics of a Small-Molecule Ligand within the Active Site of a Protein.
Angew.Chem.Int.Ed.Engl., 63, 2024
8B6R
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X-ray structure of the haloalkane dehalogenase HaloTag7 labeled with a chloroalkane Cyanine3 fluorophore substrate
分子名称: CHLORIDE ION, GLYCEROL, Haloalkane dehalogenase, ...
著者Tarnawski, M, Hellweg, L, Hiblot, J.
登録日2022-09-27
公開日2023-07-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A general method for the development of multicolor biosensors with large dynamic ranges.
Nat.Chem.Biol., 19, 2023
4NCV
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Foldon domain wild type N-conjugate
分子名称: Fibritin
著者Graewert, M.A, Berthelmann, A, Lach, J, Groll, M, Eichler, J.
登録日2013-10-25
公開日2014-03-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Versatile C(3)-symmetric scaffolds and their use for covalent stabilization of the foldon trimer.
Org.Biomol.Chem., 12, 2014
6WNV
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70S ribosome without free 5S rRNA and with a perturbed PTC
分子名称: 16S ribosomal RNA, 23s-5s joint ribosomal RNA, 30S ribosomal protein S10, ...
著者Loveland, A.B, Korostelev, A.A, Mankin, A.S, Huang, S, Aleksashin, N.A, Klepacki, D, Reier, K, Kefi, A, Szal, A, Remme, J, Jaeger, L, Vazquez-Laslop, N.
登録日2020-04-23
公開日2020-06-24
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Ribosome engineering reveals the importance of 5S rRNA autonomy for ribosome assembly.
Nat Commun, 11, 2020
3KVO
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Crystal structure of the catalytic domain of human Hydroxysteroid dehydrogenase like 2 (HSDL2)
分子名称: Hydroxysteroid dehydrogenase-like protein 2, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Ugochukwu, E, Bhatia, C, Huang, J, Pilka, E, Muniz, J.R.C, Pike, A.C.W, Krojer, T, von Delft, F, Arrowsmith, C.H, Weigelt, J, Edwards, A, Bountra, C, Verdin, E.M, Oppermann, U, Kavanagh, K.L, Structural Genomics Consortium (SGC)
登録日2009-11-30
公開日2010-03-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of the catalytic domain of human Hydroxysteroid dehydrogenase like 2 (HSDL2)
To be Published
8QYQ
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Beta-cardiac myosin S1 fragment in the pre-powerstroke state complexed to Mavacamten
分子名称: 6-[[(1~{S})-1-phenylethyl]amino]-3-propan-2-yl-1~{H}-pyrimidine-2,4-dione, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
著者Robert-Paganin, J, Kikuti, C, Auguin, D, Rety, S, David, A, Houdusse, A.
登録日2023-10-26
公開日2023-12-13
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Omecamtiv mecarbil and Mavacamten target the same myosin pocket despite antagonistic effects in heart contraction.
Biorxiv, 2023
8QYP
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Beta-cardiac myosin motor domain in the pre-powerstroke state
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Myosin-7, ...
著者Robert-Paganin, J, Kikuti, C, Auguin, D, Rety, S, David, A, Houdusse, A.
登録日2023-10-26
公開日2023-12-13
実験手法X-RAY DIFFRACTION (2.759 Å)
主引用文献Omecamtiv mecarbil and Mavacamten target the same myosin pocket despite antagonistic effects in heart contraction.
Biorxiv, 2023
8QYU
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Beta-cardiac myosin S1 fragment in the pre-powerstroke state complexed to Omecamtiv mecarbil
分子名称: ADENOSINE-5'-DIPHOSPHATE, DIMETHYL SULFOXIDE, FORMIC ACID, ...
著者Robert-Paganin, J, Kikuti, C, Auguin, D, Rety, S, David, A, Houdusse, A.
登録日2023-10-26
公開日2023-12-13
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Omecamtiv mecarbil and Mavacamten target the same myosin pocket despite antagonistic effects in heart contraction.
Biorxiv, 2023
8QYR
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Beta-cardiac myosin motor domain in the pre-powerstroke state complexed to Mavacamten
分子名称: 1,2-ETHANEDIOL, 6-[[(1~{S})-1-phenylethyl]amino]-3-propan-2-yl-1~{H}-pyrimidine-2,4-dione, ADENOSINE-5'-DIPHOSPHATE, ...
著者Robert-Paganin, J, Kikuti, C, Auguin, D, Rety, S, David, A, Houdusse, A.
登録日2023-10-26
公開日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Omecamtiv mecarbil and Mavacamten target the same myosin pocket despite antagonistic effects in heart contraction.
Biorxiv, 2023
5WZ2
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Crystal structure of Zika virus NS5 methyltransferase bound to SAM and RNA analogue (m7GpppA)
分子名称: NS5 MTase, P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, S-ADENOSYLMETHIONINE
著者Duan, W, Song, H, Qi, J, Shi, Y, Gao, G.F.
登録日2017-01-16
公開日2017-03-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The crystal structure of Zika virus NS5 reveals conserved drug targets.
EMBO J., 36, 2017
8R8A
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Structure of the N-terminal domain of CMA in complex with N-acetyllactosamine
分子名称: CADMIUM ION, Nigrin b-like, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose
著者Lundstrom, J, Varrot, A.
登録日2023-11-28
公開日2023-12-27
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.317 Å)
主引用文献Elucidating the glycan-binding specificity and structure of Cucumis melo agglutinin, a new R-type lectin.
Beilstein J Org Chem, 20, 2024
6Q8K
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CLK1 with bound pyridoquinazoline
分子名称: 1,2-ETHANEDIOL, Dual specificity protein kinase CLK1, ~{N}2-(3-morpholin-4-ylpropyl)pyrido[3,4-g]quinazoline-2,10-diamine
著者Schroeder, M, Tazarki, H, Zeinyeh, W, Esvan, Y.J, Khiari, J, Joesselin, B, Bach, S, Ruchaud, S, Anizon, F, Giraud, F, Moreau, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2018-12-14
公開日2019-02-20
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献New pyrido[3,4-g]quinazoline derivatives as CLK1 and DYRK1A inhibitors: synthesis, biological evaluation and binding mode analysis.
Eur J Med Chem, 166, 2019
6Q8X
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Respiratory complex I from Thermus thermophilus with bound Pyridaben.
分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
著者Gutierrez-Fernandez, J, Minhas, G.S, Sazanov, L.A.
登録日2018-12-16
公開日2020-09-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.508 Å)
主引用文献Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
8R4E
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Hybrid-1R G-quadruplex with a +(lpp) loop progression
分子名称: DNA (27-MER)
著者Jana, J, Vianney, Y.M, Weisz, K.
登録日2023-11-13
公開日2023-12-27
最終更新日2024-01-31
実験手法SOLUTION NMR
主引用文献Impact of loop length and duplex extensions on the design of hybrid-type G-quadruplexes.
Chem.Commun.(Camb.), 60, 2024
2NY0
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HIV-1 gp120 Envelope Glycoprotein (M95W, W96C, T257S, V275C, S334A, S375W, A433M) Complexed with CD4 and Antibody 17b
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ...
著者Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D.
登録日2006-11-20
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural definition of a conserved neutralization epitope on HIV-1 gp120.
Nature, 445, 2007
8R4W
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(3+1) hybrid-2 G-quadruplex with a -(llp) loop progression
分子名称: DNA (25-MER)
著者Jana, J, Vianney, Y.M, Weisz, K.
登録日2023-11-14
公開日2023-12-27
最終更新日2024-01-31
実験手法SOLUTION NMR
主引用文献Impact of loop length and duplex extensions on the design of hybrid-type G-quadruplexes.
Chem.Commun.(Camb.), 60, 2024
6QBC
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structure of anti-Mcl1 Fab
分子名称: Anti-Mcl1 Fab Heavy Chain, Anti-Mcl1 Fab Light Chain
著者Luptak, J.
登録日2018-12-20
公開日2019-11-06
最終更新日2019-11-13
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Antibody fragments structurally enable a drug-discovery campaign on the cancer target Mcl-1.
Acta Crystallogr D Struct Biol, 75, 2019
5ZAZ
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Solution structure of integrin b2 monomer tranmembrane domain in bicelle
分子名称: Integrin beta-2
著者Li, H, Guo, J, Xu, C.
登録日2018-02-09
公開日2018-10-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Intramembrane ionic protein-lipid interaction regulates integrin structure and function.
PLoS Biol., 16, 2018
6Q7L
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Spiral structure of E. coli RavA in the RavA-LdcI cage-like complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase RavA, Inducible lysine decarboxylase, ...
著者Arragain, B, Felix, J, Malet, H, Gutsche, I, Jessop, M.
登録日2018-12-13
公開日2020-02-12
最終更新日2020-02-19
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Structural insights into ATP hydrolysis by the MoxR ATPase RavA and the LdcI-RavA cage-like complex.
Commun Biol, 3, 2020
8RI0
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Crystal structure of Tm1570 domain from Calditerrivibrio nitroreducens in complex with S-adenosyl-L-methionine
分子名称: S-ADENOSYLMETHIONINE, tRNA (guanine-N(1)-)-methyltransferase
著者Kluza, A, Lewandowska, I, Sulkowska, J.
登録日2023-12-18
公開日2024-01-10
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Are there double knots in proteins? Prediction and in vitro verification based on TrmD-Tm1570 fusion from C. nitroreducens. To be published
To Be Published
2O1Z
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Plasmodium vivax Ribonucleotide Reductase Subunit R2 (Pv086155)
分子名称: FE (III) ION, Ribonucleotide Reductase Subunit R2, UNKNOWN ATOM OR ION
著者Dong, A, Tempel, W, Qiu, W, Lew, J, Wernimont, A.K, Lin, Y.H, Hassanali, A, Melone, M, Zhao, Y, Nordlund, P, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Artz, J.D, Amani, M, Structural Genomics Consortium (SGC)
登録日2006-11-29
公開日2006-12-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of Plasmodium vivax Ribonucleotide Reductase Subunit R2 (Pv086155)
To be Published
6WZZ
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GID4 in complex with VGLWKS peptide
分子名称: Glucose-induced degradation protein 4 homolog, UNKNOWN ATOM OR ION, VGLWKS peptide
著者Dong, C, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2020-05-14
公開日2020-06-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Recognition of nonproline N-terminal residues by the Pro/N-degron pathway.
Proc.Natl.Acad.Sci.USA, 117, 2020
2NZJ
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The crystal structure of REM1 in complex with GDP
分子名称: CHLORIDE ION, GTP-binding protein REM 1, GUANOSINE-5'-DIPHOSPHATE, ...
著者Turnbull, A.P, Papagrigoriou, E, Ugochukwu, E, Elkins, J.M, Soundararajan, M, Yang, X, Gorrec, F, Umeano, C, Salah, E, Burgess, N, Johansson, C, Berridge, G, Gileadi, O, Bray, J, Marsden, B, Watts, S, von Delft, F, Weigelt, J, Edwards, A, Arrowsmith, C.H, Sundstrom, M, Doyle, D, Structural Genomics Consortium (SGC)
登録日2006-11-23
公開日2006-12-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of REM1 in complex with GDP
To be Published
6X0R
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A Circular Permutant of the Tobacco Mosaic Virus (TMV) mutant Q101H
分子名称: Capsid protein Circular Permutant
著者Dai, J, Knott, G.J, Francis, M.B.
登録日2020-05-17
公開日2020-12-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Protein-Embedded Metalloporphyrin Arrays Templated by Circularly Permuted Tobacco Mosaic Virus Coat Proteins.
Acs Nano, 15, 2021

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件を2024-07-17に公開中

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