Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42507 件

3SKO
DownloadVisualize
BU of 3sko by Molmil
Crystal structure of the HLA-B8-A66-FLR, mutant A66 of the HLA B8
分子名称: Beta-2-microglobulin, Epstein-Barr nuclear antigen 3, HLA class I histocompatibility antigen, ...
著者Gras, S, Wilmann, P.G, Zhenjun, C, Hanim, H, Yu Chih, L, Kjer-Nielsen, L, Purcell, A.W, Burrows, S.R, Mccluskey, J, Rossjohn, J.
登録日2011-06-22
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A structural basis for varied alpha-beta TCR usage against an immunodominant EBV antigen restricted to a HLA-B8 molecule.
J.Immunol., 188, 2012
6OT4
DownloadVisualize
BU of 6ot4 by Molmil
Bimetallic dodecameric cage design 2 (BMC2) from cytochrome cb562
分子名称: ACETOHYDROXAMIC ACID, FE (III) ION, HEME C, ...
著者Golub, E, Esselborn, J, Bailey, J.B, Tezcan, F.A.
登録日2019-05-02
公開日2020-01-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Constructing protein polyhedra via orthogonal chemical interactions.
Nature, 578, 2020
6OT7
DownloadVisualize
BU of 6ot7 by Molmil
Bimetallic dodecameric cage design 3 (BMC3) from cytochrome cb562
分子名称: ACETOHYDROXAMIC ACID, FE (III) ION, HEME C, ...
著者Golub, E, Esselborn, J, Bailey, J.B, Tezcan, F.A.
登録日2019-05-02
公開日2020-01-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Constructing protein polyhedra via orthogonal chemical interactions.
Nature, 578, 2020
6OT8
DownloadVisualize
BU of 6ot8 by Molmil
Bimetallic hexameric cage design 4 (BMC4) from cytochrome cb562
分子名称: ACETOHYDROXAMIC ACID, FE (III) ION, HEME C, ...
著者Golub, E, Esselborn, J, Bailey, J.B, Tezcan, F.A.
登録日2019-05-02
公開日2020-01-29
最終更新日2020-02-19
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Constructing protein polyhedra via orthogonal chemical interactions.
Nature, 578, 2020
6OUC
DownloadVisualize
BU of 6ouc by Molmil
Asymmetric focsued reconstruction of human norovirus GII.2 Snow Mountain Virus strain VLP asymmetric unit in T=1 symmetry
分子名称: Viral protein 1, ZINC ION
著者Jung, J, Grant, T, Thomas, D.R, Diehnelt, C.W, Grigorieff, N, Joshua-Tor, L.
登録日2019-05-04
公開日2019-06-26
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
Proc.Natl.Acad.Sci.USA, 116, 2019
8W7M
DownloadVisualize
BU of 8w7m by Molmil
Yeast replisome in state V
分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 45, DNA (71-mer), ...
著者Dang, S, Zhai, Y, Feng, J, Yu, D, Xu, Z.
登録日2023-08-30
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (4.12 Å)
主引用文献Synergism between CMG helicase and leading strand DNA polymerase at replication fork.
Nat Commun, 14, 2023
2PEH
DownloadVisualize
BU of 2peh by Molmil
Crystal structure of the UHM domain of human SPF45 in complex with SF3b155-ULM5
分子名称: Splicing factor 3B subunit 1, Splicing factor 45
著者Corsini, L, Basquin, J, Hothorn, M, Sattler, M.
登録日2007-04-03
公開日2007-06-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献U2AF-homology motif interactions are required for alternative splicing regulation by SPF45.
Nat.Struct.Mol.Biol., 14, 2007
6OUU
DownloadVisualize
BU of 6ouu by Molmil
Symmetric reconstruction of human norovirus GII.4 Minerva strain VLP in T=4 symmetry
分子名称: Major capsid protein
著者Jung, J, Grant, T, Thomas, D.R, Diehnelt, C.W, Grigorieff, N, Joshua-Tor, L.
登録日2019-05-05
公開日2019-06-26
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
Proc.Natl.Acad.Sci.USA, 116, 2019
7WRH
DownloadVisualize
BU of 7wrh by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.1 spike protein in complex with mouse ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Han, P, Xie, Y, Qi, J.
登録日2022-01-26
公開日2023-02-01
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献Broader-species receptor binding and structural bases of Omicron SARS-CoV-2 to both mouse and palm-civet ACE2s.
Cell Discov, 8, 2022
6OVQ
DownloadVisualize
BU of 6ovq by Molmil
Crystal structure of mithramycin 3-side chain keto-reductase MtmW
分子名称: GLYCEROL, Putative Side chain reductase
著者Hou, C, Yu, X, Rohr, J, Tsodikov, O.V.
登録日2019-05-08
公開日2019-11-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Discovery of a Cryptic Intermediate in Late Steps of Mithramycin Biosynthesis.
Angew.Chem.Int.Ed.Engl., 59, 2020
7W5N
DownloadVisualize
BU of 7w5n by Molmil
The crystal structure of the reduced form of Gluconobacter oxydans WSH-004 SNDH
分子名称: L-sorbosone dehydrogenase, NAD(P) dependent, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Li, D, Hou, X.D, Rao, Y.J, Yin, D.J, Zhou, J.W, Chen, J.
登録日2021-11-30
公開日2023-03-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.988 Å)
主引用文献Structural Insight into the Catalytic Mechanisms of an L-Sorbosone Dehydrogenase.
Adv Sci, 10, 2023
6SP8
DownloadVisualize
BU of 6sp8 by Molmil
Structure of hyperstable haloalkane dehalogenase variant DhaA115 prepared by the 'soak-and-freeze' method under 150 bar of krypton pressure
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Haloalkane dehalogenase, ...
著者Chmelova, K, Markova, K, Damborsky, J, Marek, M.
登録日2019-08-31
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Decoding the intricate network of molecular interactions of a hyperstable engineered biocatalyst.
Chem Sci, 11, 2020
7W5K
DownloadVisualize
BU of 7w5k by Molmil
The C296A mutant of L-sorbosone dehydrogenase (SNDH) from Gluconobacter Oxydans WSH-004
分子名称: L-sorbosone dehydrogenase, NAD(P) dependent, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Li, D, Hou, X.D, Rao, Y.J, Zhou, J.W, Chen, J.
登録日2021-11-30
公開日2023-03-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Structural Insight into the Catalytic Mechanisms of an L-Sorbosone Dehydrogenase.
Adv Sci, 10, 2023
6O5I
DownloadVisualize
BU of 6o5i by Molmil
Menin in complex with MI-3454
分子名称: DIMETHYL SULFOXIDE, Menin, SULFATE ION, ...
著者Linhares, B.M, Klossowski, S, Cierpicki, T, Grembecka, J.
登録日2019-03-03
公開日2020-01-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.24025619 Å)
主引用文献Menin inhibitor MI-3454 induces remission in MLL1-rearranged and NPM1-mutated models of leukemia.
J.Clin.Invest., 130, 2020
4WXX
DownloadVisualize
BU of 4wxx by Molmil
The crystal structure of human DNMT1(351-1600)
分子名称: DNA (cytosine-5)-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Zhang, Z.M, Song, J.
登録日2014-11-14
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.622 Å)
主引用文献Crystal Structure of Human DNA Methyltransferase 1.
J.Mol.Biol., 427, 2015
6O7K
DownloadVisualize
BU of 6o7k by Molmil
30S initiation complex
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Frank, J, Gonzalez Jr, R.L, kaledhonkar, S, Fu, Z, Caban, K, Li, W, Chen, B, Sun, M.
登録日2019-03-08
公開日2019-05-29
最終更新日2020-01-29
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Late steps in bacterial translation initiation visualized using time-resolved cryo-EM.
Nature, 570, 2019
6SQI
DownloadVisualize
BU of 6sqi by Molmil
Crystal structure of mouse PRMT6 with C-terminal TEV cleavage site
分子名称: CALCIUM ION, Protein arginine N-methyltransferase 6
著者Bonnefond, L, Cavarelli, J.
登録日2019-09-04
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of mouse PRMT6 in complex with inhibitors
To Be Published
4WEV
DownloadVisualize
BU of 4wev by Molmil
Crystal structure of human AKR1B10 complexed with NADP+ and sulindac
分子名称: Aldo-keto reductase family 1 member B10, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, [(1Z)-5-fluoro-2-methyl-1-{4-[methylsulfinyl]benzylidene}-1H-inden-3-yl]acetic acid
著者Cousido-Siah, A, Ruiz, F.X, Mitschler, A, Crespo, I, Porte, S, Pares, X, Farres, J, Podjarny, A.
登録日2014-09-11
公開日2015-01-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.453 Å)
主引用文献Structural analysis of sulindac as an inhibitor of aldose reductase and AKR1B10.
Chem.Biol.Interact., 234, 2015
6O67
DownloadVisualize
BU of 6o67 by Molmil
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with Mitoglitazone
分子名称: Mitoglitazone, Peroxisome proliferator-activated receptor gamma, nonanoic acid
著者Shang, J, Kojetin, D.J.
登録日2019-03-05
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Quantitative structural assessment of graded receptor agonism.
Proc.Natl.Acad.Sci.USA, 116, 2019
4GLS
DownloadVisualize
BU of 4gls by Molmil
Crystal Structure of Chemically Synthesized Heterochiral {D-Protein Antagonist plus VEGF-A} Protein Complex in space group P21
分子名称: D- RFX001, D- Vascular endothelial growth factor-A, DI(HYDROXYETHYL)ETHER, ...
著者Mandal, K, Uppalapati, M, Ault-Riche, D, Kenney, J, Lowitz, J, Sidhu, S, Kent, S.B.H.
登録日2012-08-14
公開日2012-09-05
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Chemical synthesis and X-ray structure of a heterochiral {D-protein antagonist plus vascular endothelial growth factor} protein complex by racemic crystallography.
Proc.Natl.Acad.Sci.USA, 109, 2012
8W6I
DownloadVisualize
BU of 8w6i by Molmil
Cryo-EM structure of Escherichia coli Str K12 FtsEX complex with ATP-gamma-S in peptidisc
分子名称: Cell division ATP-binding protein FtsE, Cell division protein FtsX, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
著者Li, J, Xu, X, He, Y, Luo, M.
登録日2023-08-29
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of Escherichia coli Str K12 FtsEX complex with ATP-gamma-S in peptidisc
To Be Published
8W7S
DownloadVisualize
BU of 8w7s by Molmil
Yeast replisome in state IV
分子名称: Cell division control protein 45, DNA (71-mer), DNA polymerase alpha-binding protein, ...
著者Dang, S, Zhai, Y, Feng, J, Yu, D.
登録日2023-08-31
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (7.39 Å)
主引用文献Synergism between CMG helicase and leading strand DNA polymerase at replication fork.
Nat Commun, 14, 2023
8W6J
DownloadVisualize
BU of 8w6j by Molmil
Cryo-EM structure of Escherichia coli Str K12 FtsE(E163Q)X/EnvC complex with ATP in peptidisc
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell division ATP-binding protein FtsE, Cell division protein FtsX, ...
著者Li, J, Xu, X, He, Y, Luo, M.
登録日2023-08-29
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structure of Escherichia coli Str K12 FtsE(E163Q)X/EnvC complex with ATP in peptidisc
To Be Published
4WSR
DownloadVisualize
BU of 4wsr by Molmil
The crystal structure of hemagglutinin form A/chicken/New York/14677-13/1998
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
著者Yang, H, Carney, P.J, Chang, J.C, Villanueva, J.M, Stevens, J.
登録日2014-10-28
公開日2015-02-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and receptor binding preferences of recombinant hemagglutinins from avian and human h6 and h10 influenza a virus subtypes.
J.Virol., 89, 2015
4WSU
DownloadVisualize
BU of 4wsu by Molmil
The crystal structure of hemagglutinin from A/Taiwan/1/2013 in complex with 3'SLN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, ...
著者Yang, H, Carney, P.J, Chang, J.C, Villanueva, J.M, Stevens, J.
登録日2014-10-28
公開日2015-02-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure and receptor binding preferences of recombinant hemagglutinins from avian and human h6 and h10 influenza a virus subtypes.
J.Virol., 89, 2015

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon