Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42254 件

4UC2
DownloadVisualize
BU of 4uc2 by Molmil
Crystal structure of translocator protein 18kDa (TSPO) from rhodobacter sphaeroides (A139T mutant) in P212121 space group
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, TETRAETHYLENE GLYCOL, TRANSLOCATOR PROTEIN TSPO
著者Li, F, Liu, J, Zheng, Y, Garavito, R.M, Ferguson-Miller, S.
登録日2014-08-13
公開日2015-02-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of translocator protein (TSPO) and mutant mimic of a human polymorphism.
Science, 347, 2015
7PAS
DownloadVisualize
BU of 7pas by Molmil
70S ribosome with P/E-site tRNA in Mycoplasma pneumoniae cells
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Xue, L, Lenz, S, Rappsilber, J, Mahamid, J.
登録日2021-07-30
公開日2022-05-25
最終更新日2022-10-19
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献Visualizing translation dynamics at atomic detail inside a bacterial cell.
Nature, 610, 2022
4UBQ
DownloadVisualize
BU of 4ubq by Molmil
Crystal Structure of IMP-2 Metallo-beta-Lactamase from Acinetobacter spp.
分子名称: ACETATE ION, Beta-lactamase, ZINC ION
著者Yamaguchi, Y, Matsueda, S, Matsunaga, K, Takashio, N, Toma-Fukai, S, Yamagata, Y, Shibata, N, Wachino, J, Shibayama, K, Arakawa, Y, Kurosaki, H.
登録日2014-08-13
公開日2014-12-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of IMP-2 metallo-beta-lactamase from Acinetobacter spp.: comparison of active-site loop structures between IMP-1 and IMP-2.
Biol.Pharm.Bull., 38, 2015
4UHZ
DownloadVisualize
BU of 4uhz by Molmil
Crystal structure of the human RGMB-BMP2 complex, crystal form 1
分子名称: BONE MORPHOGENETIC PROTEIN 2, RGM DOMAIN FAMILY MEMBER B, SULFATE ION
著者Healey, E.G, Bishop, B, Elegheert, J, Bell, C.H, Padilla-Parra, S, Siebold, C.
登録日2015-03-27
公開日2015-05-06
最終更新日2015-06-17
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Repulsive Guidance Molecule is a Structural Bridge between Neogenin and Bone Morphogenetic Protein.
Nat.Struct.Mol.Biol., 22, 2015
4UMN
DownloadVisualize
BU of 4umn by Molmil
Structure of a stapled peptide antagonist bound to Nutlin-resistant Mdm2.
分子名称: E3 ubiquitin-protein ligase Mdm2, M06
著者Chee, S, Wongsantichon, J, Quah, S, Robinson, R.C, Verma, C, Lane, D.P, Brown, C.J, Ghadessy, F.J.
登録日2014-05-20
公開日2014-05-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structure of a stapled peptide antagonist bound to nutlin-resistant Mdm2.
PLoS ONE, 9, 2014
4UHY
DownloadVisualize
BU of 4uhy by Molmil
Crystal structure of the human RGMA-BMP2 complex
分子名称: BONE MORPHOGENETIC PROTEIN 2, REPULSIVE GUIDANCE MOLECULE A
著者Healey, E.G, Bishop, B, Elegheert, J, Bell, C.H, Padilla-Parra, S, Siebold, C.
登録日2015-03-27
公開日2015-05-06
最終更新日2015-06-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Repulsive Guidance Molecule is a Structural Bridge between Neogenin and Bone Morphogenetic Protein.
Nat.Struct.Mol.Biol., 22, 2015
7PAM
DownloadVisualize
BU of 7pam by Molmil
70S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Xue, L, Lenz, S, Rappsilber, J, Mahamid, J.
登録日2021-07-30
公開日2022-05-25
最終更新日2022-10-19
実験手法ELECTRON MICROSCOPY (6.8 Å)
主引用文献Visualizing translation dynamics at atomic detail inside a bacterial cell.
Nature, 610, 2022
4UDX
DownloadVisualize
BU of 4udx by Molmil
CO2 bound to cluster C of Ni,Fe-CO dehydrogenase at true-atomic resolution
分子名称: CARBON DIOXIDE, CARBON MONOXIDE DEHYDROGENASE 2, FE (II) ION, ...
著者Fesseler, J, Jeoung, J.-H, Dobbek, H.
登録日2014-12-12
公開日2015-05-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献How the [NiFe4S4] Cluster of CO Dehydrogenase Activates CO2 and NCO(-).
Angew. Chem. Int. Ed. Engl., 54, 2015
4UEG
DownloadVisualize
BU of 4ueg by Molmil
Crystal structure of human glycogenin-2 catalytic domain
分子名称: GLYCOGENIN-2, MAGNESIUM ION
著者Fairhead, M, Strain-Damerell, C, Krojer, T, Froese, D.S, Kopec, J, Nowak, R, Burgess-Brown, N, von Delft, F, Arrowsmith, C, Edwards, A, Bountra, C, Yue, W.W.
登録日2014-12-17
公開日2014-12-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Crystal Structure of Human Glycogenin-2 Catalytic Domain
To be Published
4UOV
DownloadVisualize
BU of 4uov by Molmil
The structure of a tetrameric alpha-carbonic anhydrase from Thermovibrio ammonificans reveals a core formed around intermolecular disulfides, which contribute to its thermostability.
分子名称: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ...
著者James, P, Isupov, M, Sayer, C, Berg, S, Lioliou, M, Kotlar, H, Littlechild, J.
登録日2014-06-10
公開日2014-10-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The Structure of a Tetrameric [Alpha]-Carbonic Anhydrase from Thermovibrio Ammonificans Reveals a Core Formed Around Intermolecular Disulfides that Contribute to its Thermostability
Acta Crystallogr.,Sect.D, 70, 2014
4UN8
DownloadVisualize
BU of 4un8 by Molmil
THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 1H INCUBATION IN 5MM MN (STATE 2)
分子名称: 25MER, HOMING ENDONUCLEASE I-DMOI, MANGANESE (II) ION
著者Molina, R, Stella, S, Redondo, P, Gomez, H, Marcaida, M.J, Orozco, M, Prieto, J, Montoya, G.
登録日2014-05-26
公開日2014-12-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Visualizing Phosphodiester-Bond Hydrolysis by an Endonuclease.
Nat.Struct.Mol.Biol., 22, 2015
4UI2
DownloadVisualize
BU of 4ui2 by Molmil
Crystal structure of the ternary RGMB-BMP2-NEO1 complex
分子名称: ACETATE ION, BONE MORPHOGENETIC PROTEIN 2, BMP2, ...
著者Healey, E.G, Bishop, B, Elegheert, J, Bell, C.H, Padilla-Parra, S, Siebold, C.
登録日2015-03-27
公開日2015-05-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Repulsive Guidance Molecule is a Structural Bridge between Neogenin and Bone Morphogenetic Protein.
Nat.Struct.Mol.Biol., 22, 2015
4UI0
DownloadVisualize
BU of 4ui0 by Molmil
Crystal structure of the human RGMB-BMP2 complex, crystal form 2
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, BONE MORPHOGENETIC PROTEIN 2, CHLORIDE ION, ...
著者Healey, E.G, Bishop, B, Elegheert, J, Bell, C.H, Padilla-Parra, S, Siebold, C.
登録日2015-03-27
公開日2015-05-06
最終更新日2015-06-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Repulsive Guidance Molecule is a Structural Bridge between Neogenin and Bone Morphogenetic Protein.
Nat.Struct.Mol.Biol., 22, 2015
4UI9
DownloadVisualize
BU of 4ui9 by Molmil
Atomic structure of the human Anaphase-Promoting Complex
分子名称: ANAPHASE-PROMOTING COMPLEX SUBUNIT 1, ANAPHASE-PROMOTING COMPLEX SUBUNIT 10, ANAPHASE-PROMOTING COMPLEX SUBUNIT 11, ...
著者Chang, L, Zhang, Z, Yang, J, McLaughlin, S.H, Barford, D.
登録日2015-03-27
公開日2015-06-17
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Atomic Structure of the Apc and its Mechanism of Protein Ubiquitination
Nature, 522, 2015
4UHN
DownloadVisualize
BU of 4uhn by Molmil
Characterization of a Novel Transaminase from Pseudomonas sp. Strain AAC
分子名称: ACETIC ACID, GLYCEROL, MAGNESIUM ION, ...
著者Wilding, M, Peat, T.S, Newman, J, Scott, C.
登録日2015-03-25
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献A Beta-Alanine Catabolism Pathway Containing a Highly Promiscuous Omega-Transaminase in the 12-Aminododecanate-Degrading Pseudomonas Sp. Strain Aac.
Appl.Environ.Microbiol., 82, 2016
4UNA
DownloadVisualize
BU of 4una by Molmil
THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 2 DAYS INCUBATION IN 5MM MN (STATE 4)
分子名称: 25MER, 5'-D(*CP*CP*GP*GP*CP*AP*AP*GP*GP*C)-3', 5'-D(*CP*GP*CP*GP*CP*CP*GP*GP*AP*AP*CP*TP*TP*AP*C)-3', ...
著者Molina, R, Stella, S, Redondo, P, Gomez, H, Marcaida, M.J, Orozco, M, Prieto, J, Montoya, G.
登録日2014-05-26
公開日2014-12-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Visualizing Phosphodiester-Bond Hydrolysis by an Endonuclease.
Nat.Struct.Mol.Biol., 22, 2015
4UIH
DownloadVisualize
BU of 4uih by Molmil
Cryo-EM structure of Dengue virus serotype 2 strain New Guinea-C complexed with human antibody 2D22 Fab at 37 degree C. The Fab molecules were added to the virus before 37 degree C incubation.
分子名称: ANTIGEN-BINDING FRAGMENT OF HUMAN ANTIBODY 2D22 -HEAVY CHAIN, ANTIGEN-BINDING FRAGMENT OF HUMAN ANTIBODY 2D22 -LIGHT CHAIN, DENGUE VIRUS SEROTYPE 2 STRAIN NEW GUINEA-C E PROTEIN ECTODOMAIN
著者Fibriansah, G, Ibarra, K.D, Ng, T.-S, Smith, S.A, Tan, J.L, Lim, X.N, Ooi, J.S.G, Kostyuchenko, V.A, Wang, J, de Silva, A.M, Harris, E, Crowe, J.E, Lok, S.-M.
登録日2015-03-30
公開日2015-07-15
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Cryo-EM structure of an antibody that neutralizes dengue virus type 2 by locking E protein dimers.
Science, 349, 2015
4UN9
DownloadVisualize
BU of 4un9 by Molmil
THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 8H INCUBATION IN 5MM MN (STATE 3)
分子名称: 25MER, HOMING ENDONUCLEASE I-DMOI, MANGANESE (II) ION
著者Molina, R, Stella, S, Redondo, P, Gomez, H, Marcaida, M.J, Orozco, M, Prieto, J, Montoya, G.
登録日2014-05-26
公開日2015-01-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.734 Å)
主引用文献Visualizing Phosphodiester-Bond Hydrolysis by an Endonuclease.
Nat.Struct.Mol.Biol., 22, 2015
4UNG
DownloadVisualize
BU of 4ung by Molmil
Human insulin B26Asn mutant crystal structure
分子名称: INSULIN A CHAIN, INSULIN B CHAIN, SULFATE ION
著者Zakova, L, Klevtikova, E, Lepsik, M, Collinsova, M, Watson, C.J, Turkenburg, J.P, Jiracek, J, Brzozowski, A.M.
登録日2014-05-28
公開日2014-10-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Human Insulin Analogues Modified at the B26 Site Reveal a Hormone Conformation that is Undetected in the Receptor Complex
Acta Crystallogr.,Sect.D, 70, 2014
4UOB
DownloadVisualize
BU of 4uob by Molmil
Crystal structure of Deinococcus radiodurans Endonuclease III-3
分子名称: ACETATE ION, COBALT (II) ION, ENDONUCLEASE III-3, ...
著者Sarre, A, Okvist, M, Klar, T, Hall, D, Smalas, A.O, McSweeney, S, Timmins, J, Moe, E.
登録日2014-06-02
公開日2015-06-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Structural and Functional Characterization of Two Unusual Endonuclease III Enzymes from Deinococcus Radiodurans.
J.Struct.Biol., 191, 2015
4UIQ
DownloadVisualize
BU of 4uiq by Molmil
Isolated globin domain of the Bordetella pertussis globin-coupled sensor with a heme at the dimer interface
分子名称: GLOBIN-COUPLED SENSOR WITH DIGUANYLATE CYCLASE ACTIVITY, GLYCEROL, IMIDAZOLE, ...
著者Germani, F, Donne, J, De Schutter, A, Pesce, A, Berghmans, H, Van Hauwaert, M.-L, Moens, L, Van Doorslaer, S, Bolognesi, M, Nardini, M, Dewilde, S.
登録日2015-03-31
公開日2016-04-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Identification of a Putative Allosteric Site in the Sensor Domain of Bordetella Pertussis Globin- Coupled Sensor for the Control of Biofilm Formation
To be Published
4UP0
DownloadVisualize
BU of 4up0 by Molmil
Ternary crystal structure of the Pygo2 PHD finger in complex with the B9L HD1 domain and a H3K4me2 peptide
分子名称: HISTONE H3.1, PYGOPUS HOMOLOG 2, B-CELL CLL/LYMPHOMA 9-LIKE PROTEIN, ...
著者Miller, T.C.R, Fiedler, M, Rutherford, T.J, Birchall, K, Chugh, J, Bienz, M.
登録日2014-06-11
公開日2014-11-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Competitive Binding of a Benzimidazole to the Histone-Binding Pocket of the Pygo Phd Finger.
Acs Chem.Biol., 9, 2014
4UHM
DownloadVisualize
BU of 4uhm by Molmil
Characterization of a Novel Transaminase from Pseudomonas sp. Strain AAC
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, ETHANOL, ...
著者Wilding, M, Peat, T.S, Newman, J, Scott, C.
登録日2015-03-25
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献A Beta-Alanine Catabolism Pathway Containing a Highly Promiscuous Omega-Transaminase in the 12-Aminododecanate-Degrading Pseudomonas Sp. Strain Aac.
Appl.Environ.Microbiol., 82, 2016
4UJ8
DownloadVisualize
BU of 4uj8 by Molmil
Structure of surface layer protein SbsC, domains 6-7
分子名称: CALCIUM ION, SURFACE LAYER PROTEIN
著者Dordic, A, Pavkov-Keller, T, Eder, M, Egelseer, E.M, Davis, K, Mills, D, Sleytr, U.B, Kuehlbrandt, W, Vonck, J, Keller, W.
登録日2015-04-08
公開日2016-04-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of Surface Layer Protein Sbsc
To be Published
4UD7
DownloadVisualize
BU of 4ud7 by Molmil
Structure of the stapled peptide YS-02 bound to MDM2
分子名称: MDM2, YS-02
著者Tan, Y.S, Reeks, J, Brown, C.J, Jennings, C.E, Eapen, R.S, Tng, Q.S, Thean, D, Ying, Y.T, Gago, F.J.F, Lane, D.P, Noble, M.E.M, Verma, C.
登録日2014-12-08
公開日2016-01-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Benzene Probes in Molecular Dynamics Simulations Reveal Novel Binding Sites for Ligand Design.
J Phys Chem Lett, 7, 2016

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon