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PDB: 42550 件
2V3W
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BU of 2v3w by Molmil
Crystal structure of the benzoylformate decarboxylase variant L461A from Pseudomonas putida
分子名称: BENZOYLFORMATE DECARBOXYLASE, MAGNESIUM ION, SULFATE ION, ...
著者Gocke, D, Walter, L, Gauchenova, K, Kolter, G, Knoll, M, Berthold, C.L, Schneider, G, Pleiss, J, Mueller, M, Pohl, M.
登録日2007-06-25
公開日2008-01-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Rational Protein Design of Thdp-Dependent Enzymes-Engineering Stereoselectivity.
Chembiochem, 9, 2008
2UWT
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BU of 2uwt by Molmil
X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 6.5 in the charge-separated state 2nd dataset
分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
著者Koepke, J, Diehm, R, Fritzsch, G.
登録日2007-03-23
公開日2007-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States.
J.Mol.Biol., 371, 2007
2MPH
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BU of 2mph by Molmil
Solution Structure of human FK506 binding Protein 25
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP3
著者Shin, J, Prakash, A, Yoon, H.
登録日2014-05-18
公開日2015-05-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis of nucleic acid recognition by FK506-binding protein 25 (FKBP25), a nuclear immunophilin.
Nucleic Acids Res., 44, 2016
2VBU
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BU of 2vbu by Molmil
Riboflavin kinase Mj0056 from Methanocaldococcus jannaschii in complex with CDP
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Hartmann, M.D, Ammelburg, M, Djuranovic, S, Martin, J, Lupas, A.N, Zeth, K.
登録日2007-09-16
公開日2007-11-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A Ctp-Dependent Archaeal Riboflavin Kinase Forms a Bridge in the Evolution of Cradle-Loop Barrels.
Structure, 15, 2007
2UWW
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BU of 2uww by Molmil
X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 6.5 in the neutral state
分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
著者Koepke, J, Diehm, R, Fritzsch, G.
登録日2007-03-23
公開日2007-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States.
J.Mol.Biol., 371, 2007
2UWA
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BU of 2uwa by Molmil
Crystal structure of the Nasturtium seedling xyloglucanase isoform NXG1
分子名称: CELLULASE, GLYCEROL
著者Baumann, M.J, Eklof, J, Michel, G, Kallasa, A, Teeri, T.T, Brumer, H, Czjzek, M.
登録日2007-03-19
公開日2007-06-26
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Evidence for the Evolution of Xyloglucanase Activity from Xyloglucan Endo-Transglycosylases: Biological Implications for Cell Wall Metabolism.
Plant Cell, 19, 2007
6JNX
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BU of 6jnx by Molmil
Cryo-EM structure of a Q-engaged arrested complex
分子名称: Antiterminator Q protein, DNA (63-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Feng, Y, Shi, J.
登録日2019-03-18
公開日2019-06-12
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.08 Å)
主引用文献Structural basis of Q-dependent transcription antitermination.
Nat Commun, 10, 2019
5KQE
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BU of 5kqe by Molmil
Solution structure of P2a-J2a/b-P2b of medaka telomerase RNA
分子名称: Telomerase RNA P2ab
著者Wang, Y, Feigon, J.
登録日2016-07-06
公開日2016-08-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural conservation in the template/pseudoknot domain of vertebrate telomerase RNA from teleost fish to human.
Proc.Natl.Acad.Sci.USA, 113, 2016
2V4Q
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BU of 2v4q by Molmil
Post-insertion complex of the Y-family DNA polymerase Dpo4 with M1dG containing template DNA
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*CP*C)-3', 5'-D(*TP*CP*AP*C M1GP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3', ...
著者Eoff, R.L, Stafford, J.B, Szekely, J, Rizzo, C.J, Egli, M, Guengerich, F.P, Marnett, L.J.
登録日2008-09-26
公開日2009-06-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and Functional Analysis of Sulfolobus Solfataricus Y-Family DNA Polymerase Dpo4-Catalyzed Bypass of the Malondialdehyde-Deoxyguanosine Adduct.
Biochemistry, 48, 2009
2UWV
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BU of 2uwv by Molmil
X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 6.5 in the charge-separated state, 3rd dataset
分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
著者Koepke, J, Diehm, R, Fritzsch, G.
登録日2007-03-23
公開日2007-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States.
J.Mol.Biol., 371, 2007
6JPS
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BU of 6jps by Molmil
Human H chain ferritin mutant-MBP
分子名称: Ferritin
著者Wang, Y, Zang, J, Chen, H.
登録日2019-03-27
公開日2019-10-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.503 Å)
主引用文献Re-designing ferritin nanocages for mercuric ion detection.
Analyst, 144, 2019
6JR3
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BU of 6jr3 by Molmil
Crystal structure of insulin hexamer fitted into cryo EM density map where each dimer was kept as rigid body
分子名称: Insulin A chain, Insulin B chain
著者Sengupta, J, Pathak, B.K, Bhakta, S.
登録日2019-04-02
公開日2020-04-22
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (14.5 Å)
主引用文献Resveratrol as a nontoxic excipient stabilizes insulin in a bioactive hexameric form.
J.Comput.Aided Mol.Des., 34, 2020
5KIZ
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BU of 5kiz by Molmil
Solution Structure of a repacked version of HIF-2 alpha PAS-B
分子名称: Endothelial PAS domain-containing protein 1
著者Correa, F, Key, J, Kuhlman, B, Gardner, K.H.
登録日2016-06-17
公開日2016-08-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Computational Repacking of HIF-2 alpha Cavity Replaces Water-Based Stabilized Core.
Structure, 24, 2016
2V20
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BU of 2v20 by Molmil
Structure of a TEM-1 beta-lactamase insertant allosterically regulated by kanamycin and anions. Complex with sulfate.
分子名称: BETA-LACTAMASE TEM, SULFATE ION, ZINC ION
著者Evrard, C, Barrios, H, Mathonet, P, Soumillion, P, Fastrez, J, Declercq, J.P.
登録日2007-05-31
公開日2008-06-24
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Engineering an Allosteric Binding Site for Aminoglycosides Into Tem1-Beta-Lactamase.
Chembiochem, 12, 2011
2V3P
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BU of 2v3p by Molmil
Crystallographic analysis of beta-axial ligand substitutions in cobalamin bound to transcobalamin
分子名称: CHLORIDE ION, COBALAMIN, SULFITE ION, ...
著者Wuerges, J, Geremia, S, Randaccio, L.
登録日2007-06-19
公開日2007-10-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Vitamin B12 Transport Proteins: Crystallographic Analysis of Beta-Axial Ligand Substitutions in Cobalamin Bound to Transcobalamin.
Iubmb Life, 59, 2007
5KNW
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BU of 5knw by Molmil
Solution NMR structure of human LARP7 xRRM2
分子名称: La-related protein 7
著者Eichhorn, C.D, Feigon, J.
登録日2016-06-28
公開日2016-10-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献hLARP7 C-terminal domain contains an xRRM that binds the 3' hairpin of 7SK RNA.
Nucleic Acids Res., 44, 2016
2VBC
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BU of 2vbc by Molmil
Crystal structure of the NS3 protease-helicase from Dengue virus
分子名称: DENGUE 4 NS3 FULL-LENGTH PROTEIN, PARTIAL POLYPROTEIN FOR NS2A AND NS2B, TYPE 4 PROTOTYPE DV4 H241
著者Luo, D.H, Xu, T, Hunke, C, Gruber, G, Vasudevan, S.G, Lescar, J.
登録日2007-09-10
公開日2007-10-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Crystal Structure of the Ns3 Protease-Helicase from Dengue Virus.
J.Virol., 82, 2008
6J91
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BU of 6j91 by Molmil
Structure of a hypothetical protease
分子名称: Small vasohibin-binding protein, Tubulinyl-Tyr carboxypeptidase 1
著者Liao, S, Gao, J, Xu, C.
登録日2019-01-21
公開日2019-06-19
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Molecular basis of vasohibins-mediated detyrosination and its impact on spindle function and mitosis.
Cell Res., 29, 2019
6J9B
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BU of 6j9b by Molmil
Arabidopsis FUS3-DNA complex
分子名称: B3 domain-containing transcription factor FUS3, DNA (5'-D(*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*TP*C)-3'), DNA (5'-D(*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*TP*G)-3')
著者Hu, H, Du, J.
登録日2019-01-22
公開日2019-05-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis.
Nat.Plants, 5, 2019
5LCW
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BU of 5lcw by Molmil
Cryo-EM structure of the Anaphase-promoting complex/Cyclosome, in complex with the Mitotic checkpoint complex (APC/C-MCC) at 4.2 angstrom resolution
分子名称: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ...
著者Alfieri, C, Chang, L, Zhang, Z, Yang, J, Maslen, S, Skehel, M, Barford, D.
登録日2016-06-22
公開日2016-08-10
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Molecular basis of APC/C regulation by the spindle assembly checkpoint.
Nature, 536, 2016
2VT8
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BU of 2vt8 by Molmil
Structure of a conserved dimerisation domain within Fbox7 and PI31
分子名称: PROTEASOME INHIBITOR PI31 SUBUNIT
著者Kirk, R.J, Murray-Rust, J, Knowles, P.P, Laman, H, McDonald, N.Q.
登録日2008-05-12
公開日2008-05-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of a Conserved Dimerization Domain within the F-Box Protein Fbxo7 and the Pi31 Proteasome Inhibitor.
J.Biol.Chem., 283, 2008
1E9E
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BU of 1e9e by Molmil
Mutant human thymidylate kinase (F105Y) complexed with dTMP and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, THYMIDINE-5'-PHOSPHATE, ...
著者Ostermann, N, Lavie, A, Padiyar, S, Brundiers, R, Veit, T, Reintein, J, Goody, R.S, Konrad, M, Schlichting, I.
登録日2000-10-11
公開日2001-10-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Potentiating Azt Activation: Structures of Wildtype and Mutant Human Thymidylate Kinase Suggest Reasons for the Mutants' Improved Kinetics with the HIV Prodrug Metabolite Aztmp
J.Mol.Biol., 304, 2000
1E9D
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BU of 1e9d by Molmil
Mutant human thymidylate kinase (F105Y) complexed with AZTMP and ADP
分子名称: 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Ostermann, N, Lavie, A, Padiyar, S, Brundiers, R, Veit, T, Reintein, J, Goody, R.S, Konrad, M, Schlichting, I.
登録日2000-10-10
公開日2001-10-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Potentiating Azt Activation: Structures of Wildtype and Mutant Human Thymidylate Kinase Suggest Reasons for the Mutants' Improved Kinetics with the HIV Prodrug Metabolite Aztmp
J.Mol.Biol., 304, 2000
5LG6
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BU of 5lg6 by Molmil
Structure of the deglycosylated porcine aminopeptidase N ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ZINC ION
著者Santiago, C, Reguera, J, Mudgal, G, Casasnovas, J.M.
登録日2016-07-06
公開日2017-04-12
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Allosteric inhibition of aminopeptidase N functions related to tumor growth and virus infection.
Sci Rep, 7, 2017
1E98
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Wild type human thymidylate kinase complexed with AZTMP and ADP
分子名称: 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Ostermann, N, Lavie, A, Padiyar, S, Brundiers, R, Veit, T, Reintein, J, Goody, R.S, Konrad, M, Schlichting, I.
登録日2000-10-10
公開日2001-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Potentiating Azt Activation: Structures of Wildtype and Mutant Human Thymidylate Kinase Suggest Reasons for the Mutants' Improved Kinetics with the HIV Prodrug Metabolite Aztmp
J.Mol.Biol., 304, 2000

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