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PDB: 42507 results

7JYO
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JAK2 JH2 in complex with JAK064
Descriptor: 3-({4-amino-6-[(4-cyanophenyl)amino]-1,3,5-triazin-2-yl}oxy)benzoic acid, GLYCEROL, Tyrosine-protein kinase JAK2
Authors:Puleo, D.E, Krimmer, S.G, Newton, A.S, Schlessinger, J, Jorgensen, W.L.
Deposit date:2020-08-31
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.16127229 Å)
Cite:Indoloxytriazines as binding molecules for the JAK2 JH2 pseudokinase domain and its V617F variant
Tetrahedron Lett., 77, 2021
3AR7
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BU of 3ar7 by Molmil
Calcium pump crystal structure with bound TNP-ATP and TG in the absence of Ca2+
Descriptor: OCTANOIC ACID [3S-[3ALPHA, 3ABETA, 4ALPHA, ...
Authors:Toyoshima, C, Yonekura, S, Tsueda, J, Iwasawa, S.
Deposit date:2010-11-24
Release date:2011-02-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Trinitrophenyl derivatives bind differently from parent adenine nucleotides to Ca2+-ATPase in the absence of Ca2+
Proc.Natl.Acad.Sci.USA, 108, 2011
3AQ8
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BU of 3aq8 by Molmil
Crystal structure of truncated hemoglobin from Tetrahymena pyriformis, Q46E mutant, Fe(III) form
Descriptor: Group 1 truncated hemoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Igarashi, J, Kobayashi, K, Matsuoka, A.
Deposit date:2010-10-25
Release date:2011-04-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:A hydrogen-bonding network formed by the B10-E7-E11 residues of a truncated hemoglobin from Tetrahymena pyriformis is critical for stability of bound oxygen and nitric oxide detoxification.
J.Biol.Inorg.Chem., 16, 2011
5IC1
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BU of 5ic1 by Molmil
Structural analysis of a talin triple domain module, E1794Y, E1797Y, Q1801Y mutant
Descriptor: 1,2-ETHANEDIOL, Talin-1
Authors:Wu, J, Chang, Y.-C.E, Zhang, H, Huang, Q.-Q.
Deposit date:2016-02-22
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and Functional Analysis of a Talin Triple-Domain Module Suggests an Alternative Talin Autoinhibitory Configuration.
Structure, 24, 2016
3HLB
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BU of 3hlb by Molmil
Simvastatin Synthase (LovD) from Aspergillus terreus, unliganded, selenomethionyl derivative
Descriptor: SULFATE ION, Transesterase
Authors:Sawaya, M.R, Yeates, T.O, Laidman, J, Pashkov, I, Gao, X, Tang, Y.
Deposit date:2009-05-27
Release date:2009-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Directed evolution and structural characterization of a simvastatin synthase
Chem.Biol., 16, 2009
3AR5
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BU of 3ar5 by Molmil
Calcium pump crystal structure with bound TNP-AMP and TG
Descriptor: 2',3'-O-[(1r)-2,4,6-trinitrocyclohexa-2,5-diene-1,1-diyl]adenosine 5'-(dihydrogen phosphate), OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
Authors:Toyoshima, C, Yonekura, S, Tsueda, J, Iwasawa, S.
Deposit date:2010-11-24
Release date:2011-02-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Trinitrophenyl derivatives bind differently from parent adenine nucleotides to Ca2+-ATPase in the absence of Ca2+
Proc.Natl.Acad.Sci.USA, 108, 2011
7JYQ
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BU of 7jyq by Molmil
JAK2 JH2 in complex with JAK020
Descriptor: GLYCEROL, N~2~-(4-fluorophenyl)-6-{[(5-{[(oxolan-2-yl)methyl]amino}-1,3,4-thiadiazol-2-yl)sulfanyl]methyl}-1,3,5-triazine-2,4-diamine, Tyrosine-protein kinase JAK2
Authors:Puleo, D.E, Krimmer, S.G, Newton, A.S, Schlessinger, J, Jorgensen, W.L.
Deposit date:2020-08-31
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85941613 Å)
Cite:Indoloxytriazines as binding molecules for the JAK2 JH2 pseudokinase domain and its V617F variant
Tetrahedron Lett., 77, 2021
1GMI
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BU of 1gmi by Molmil
Structure of the c2 domain from novel protein kinase C epsilon
Descriptor: MAGNESIUM ION, PROTEIN KINASE C, EPSILON TYPE
Authors:Ochoa, W.F, Garcia-Garcia, J, Fita, I, Corbalan-Garcia, S, Verdaguer, N, Gomez-Fernandez, J.C.
Deposit date:2001-09-14
Release date:2001-10-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the C2 Domain from Novel Protein Kinase Cepsilon. A Membrane Binding Model for Ca(2+ )-Independent C2 Domains
J.Mol.Biol., 311, 2001
5D46
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BU of 5d46 by Molmil
Structural Basis for a New Templated Activity by Terminal Deoxynucleotidyl Transferase: Implications for V(D)J Recombination
Descriptor: ACETATE ION, DNA (5'-D(*AP*AP*AP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*TP*TP*GP*C)-3'), ...
Authors:Loc'h, J, Rosario, S, Delarue, M.
Deposit date:2015-08-07
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for a New Templated Activity by Terminal Deoxynucleotidyl Transferase: Implications for V(D)J Recombination.
Structure, 24, 2016
8AP1
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BU of 8ap1 by Molmil
Cryo-EM structure of yeast mitochondrial RNA polymerase transcription initiation complex with two GTP molecules poised for de novo initiation (IC2)
Descriptor: DNA-directed RNA polymerase, mitochondrial, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Goovaerts, Q, Shen, J, Patel, S.S, Das, K.
Deposit date:2022-08-09
Release date:2023-08-23
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Structures illustrate step-by-step mitochondrial transcription initiation.
Nature, 622, 2023
5D4N
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BU of 5d4n by Molmil
Structure of CPII bound to ADP, AMP and acetate, from Thiomonas intermedia K12
Descriptor: ACETATE ION, ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Wheatley, N.M, Ngo, J, Cascio, D, Sawaya, M.R, Yeates, T.O.
Deposit date:2015-08-08
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A PII-Like Protein Regulated by Bicarbonate: Structural and Biochemical Studies of the Carboxysome-Associated CPII Protein.
J.Mol.Biol., 428, 2016
3HMF
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BU of 3hmf by Molmil
Crystal Structure of the second Bromodomain of Human Poly-bromodomain containing protein 1 (PB1)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Protein polybromo-1, ...
Authors:Filippakopoulos, P, Picaud, S, Keates, T, Muniz, J, von Delft, F, Arrowsmith, C.H, Edwards, A, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2009-05-29
Release date:2009-06-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Histone recognition and large-scale structural analysis of the human bromodomain family.
Cell(Cambridge,Mass.), 149, 2012
8AIA
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BU of 8aia by Molmil
Cryo-EM structure of crescentin filaments (wildtype, C1 symmetry and large box)
Descriptor: Crescentin, Crescentin-specific megabody MB13
Authors:Liu, Y, Lowe, J.
Deposit date:2022-07-26
Release date:2023-08-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Filament structure and subcellular organization of the bacterial intermediate filament-like protein crescentin.
Proc.Natl.Acad.Sci.USA, 121, 2024
8ATV
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BU of 8atv by Molmil
Cryo-EM structure of yeast mitochondrial RNA polymerase transcription initiation complex with 5-mer RNA, pppGpGpApApA (IC5)
Descriptor: DNA (36-MER), DNA-directed RNA polymerase, mitochondrial, ...
Authors:Goovaerts, Q, Shen, J, Patel, S.S, Das, K.
Deposit date:2022-08-24
Release date:2023-08-30
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structures illustrate step-by-step mitochondrial transcription initiation.
Nature, 622, 2023
5D6O
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BU of 5d6o by Molmil
Orthorhombic Crystal Structure of an acetylester hydrolase from Corynebacterium glutamicum
Descriptor: CHLORIDE ION, GLYCEROL, Homoserine O-acetyltransferase, ...
Authors:Niefind, K, Toelzer, C, Altenbuchner, J, Watzlawick, H.
Deposit date:2015-08-12
Release date:2015-12-09
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A novel esterase subfamily with alpha / beta-hydrolase fold suggested by structures of two bacterial enzymes homologous to l-homoserine O-acetyl transferases.
Febs Lett., 590, 2016
8AHD
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BU of 8ahd by Molmil
The apo structure of the Corramycin phosphotransferase
Descriptor: Corramycin phosphotransferase, GLYCEROL
Authors:Adam, S, Mueller, R, Koehnke, J.
Deposit date:2022-07-21
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The apo structure of the Corramycin phosphotransferase
To Be Published
8AIX
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BU of 8aix by Molmil
Cryo-EM structure of crescentin filaments (wildtype, C2 symmetry and large box)
Descriptor: Crescentin, Crescentin-specific megabody MB13
Authors:Liu, Y, Lowe, J.
Deposit date:2022-07-27
Release date:2023-08-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Filament structure and subcellular organization of the bacterial intermediate filament-like protein crescentin.
Proc.Natl.Acad.Sci.USA, 121, 2024
1JZD
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BU of 1jzd by Molmil
DsbC-DsbDalpha complex
Descriptor: thiol:disulfide interchange protein dsbc, thiol:disulfide interchange protein dsbd
Authors:Haebel, P.W, Goldstone, D, Katzen, F, Beckwith, J, Metcalf, P.
Deposit date:2001-09-15
Release date:2003-03-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Disulfide Bond Isomerase DsbC is Activated by an Immunoglobulin-fold Thiol Oxidoreductase: Crystal structure of the DsbC-DsbDalpha complex.
Embo J., 21, 2002
3AQ6
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BU of 3aq6 by Molmil
Crystal structure of truncated hemoglobin from Tetrahymena pyriformis, Fe(III) form
Descriptor: Group 1 truncated hemoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Igarashi, J, Kobayashi, K, Matsuoka, A.
Deposit date:2010-10-25
Release date:2011-04-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:A hydrogen-bonding network formed by the B10-E7-E11 residues of a truncated hemoglobin from Tetrahymena pyriformis is critical for stability of bound oxygen and nitric oxide detoxification.
J.Biol.Inorg.Chem., 16, 2011
5DA5
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BU of 5da5 by Molmil
Crystal structure of Rhodospirillum rubrum Rru_A0973
Descriptor: CALCIUM ION, FE (III) ION, GLYCOLIC ACID, ...
Authors:He, D, Vanden Hehier, S, Georgiev, A, Altenbach, K, Tarrant, E, Mackay, C.L, Waldron, K.J, Clarke, D.J, Marles-Wright, J.
Deposit date:2015-08-19
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.064 Å)
Cite:Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments.
Elife, 5, 2016
8AFE
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BU of 8afe by Molmil
Cryo-EM structure of crescentin filaments (stutter mutant, C1 symmetry and small box)
Descriptor: Crescentin, Crescentin-specific megabody MB13
Authors:Liu, Y, Lowe, J.
Deposit date:2022-07-17
Release date:2023-08-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Filament structure and subcellular organization of the bacterial intermediate filament-like protein crescentin.
Proc.Natl.Acad.Sci.USA, 121, 2024
1SHR
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BU of 1shr by Molmil
Crystal structure of ferrocyanide bound human hemoglobin A2 at 1.88A resolution
Descriptor: CYANIDE ION, FE (III) ION, Hemoglobin alpha chain, ...
Authors:Sen, U, Dasgupta, J, Choudhury, D, Datta, P, Chakrabarti, A, Chakrabarty, S.B, Chakrabarty, A, Dattagupta, J.K.
Deposit date:2004-02-26
Release date:2004-10-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structures of HbA2 and HbE and modeling of hemoglobin delta4: interpretation of the thermal stability and the antisickling effect of HbA2 and identification of the ferrocyanide binding site in Hb
Biochemistry, 43, 2004
1RB0
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BU of 1rb0 by Molmil
CRYSTAL STRUCTURE OF A BINARY COMPLEX OF E. COLI HPPK WITH 6-HYDROXYMETHYLPTERIN-DIPHOSPHATE AT 1.35 ANGSTROM RESOLUTION
Descriptor: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 6-HYDROXYMETHYLPTERIN-DIPHOSPHATE
Authors:Blaszczyk, J, Ji, X.
Deposit date:2003-10-31
Release date:2004-11-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Reaction trajectory of pyrophosphoryl transfer catalyzed by 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase.
Structure, 12, 2004
4P56
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BU of 4p56 by Molmil
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM BORDETELLA BRONCHISEPTICA, TARGET EFI-510038 (BB2442), WITH BOUND (R)-MANDELATE and (S)-MANDELATE
Descriptor: (R)-MANDELIC ACID, (S)-MANDELIC ACID, Putative extracellular solute-binding protein, ...
Authors:Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-03-14
Release date:2014-05-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
5IN3
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BU of 5in3 by Molmil
Crystal structure of glucose-1-phosphate bound nucleotidylated human galactose-1-phosphate uridylyltransferase
Descriptor: 1,2-ETHANEDIOL, 1-O-phosphono-alpha-D-glucopyranose, 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE, ...
Authors:Kopec, J, McCorvie, T, Tallant, C, Velupillai, S, Shrestha, L, Fitzpatrick, F, Patel, D, Chalk, R, Burgess-Brown, N, von Delft, F, Arrowsmith, C, Edwards, A, Bountra, C, Yue, W.W.
Deposit date:2016-03-07
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Molecular basis of classic galactosemia from the structure of human galactose 1-phosphate uridylyltransferase.
Hum.Mol.Genet., 25, 2016

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