Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42289 results

4L9X
DownloadVisualize
BU of 4l9x by Molmil
Triazine hydrolase from Arthobacter aurescens modified for maximum expression in E.coli
Descriptor: ACETATE ION, Triazine hydrolase
Authors:Jackson, C.J, Coppin, C.W, Alexandrov, A, Wilding, M, Liu, J.-W, Ubels, J, Paks, M, Carr, P.D, Newman, J, Russell, R.J, Field, M, Weik, M, Oakeshott, J.G, Scott, C.
Deposit date:2013-06-18
Release date:2014-05-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:300-Fold increase in production of the Zn2+-dependent dechlorinase TrzN in soluble form via apoenzyme stabilization.
Appl.Environ.Microbiol., 80, 2014
1T7C
DownloadVisualize
BU of 1t7c by Molmil
CRYSTAL STRUCTURE OF THE P1 GLU BPTI MUTANT- BOVINE CHYMOTRYPSIN COMPLEX
Descriptor: Chymotrypsin A, Pancreatic trypsin inhibitor, SULFATE ION
Authors:Czapinska, H, Helland, R, Otlewski, J, Smalas, A.O.
Deposit date:2004-05-09
Release date:2005-03-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of five bovine chymotrypsin complexes with P1 BPTI variants.
J.Mol.Biol., 344, 2004
3UDC
DownloadVisualize
BU of 3udc by Molmil
Crystal structure of a membrane protein
Descriptor: Small-conductance mechanosensitive channel, C-terminal peptide from Small-conductance mechanosensitive channel
Authors:Li, W, Ge, J, Yang, M.
Deposit date:2011-10-28
Release date:2012-10-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.355 Å)
Cite:Structure and molecular mechanism of an anion-selective mechanosensitive channel of small conductance
Proc.Natl.Acad.Sci.USA, 109, 2012
4LAM
DownloadVisualize
BU of 4lam by Molmil
Crystal structure of Cordyceps militaris IDCase D323N mutant in complex with 5-carboxyl-uracil
Descriptor: 2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carboxylic acid, HEXAETHYLENE GLYCOL, Uracil-5-carboxylate decarboxylase, ...
Authors:Xu, S, Li, W, Zhu, J, Ding, J.
Deposit date:2013-06-20
Release date:2013-10-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of isoorotate decarboxylases reveal a novel catalytic mechanism of 5-carboxyl-uracil decarboxylation and shed light on the search for DNA decarboxylase.
Cell Res., 23, 2013
1T9F
DownloadVisualize
BU of 1t9f by Molmil
Structural genomics of Caenorhabditis elegans: Structure of a protein with unknown function
Descriptor: MALONATE ION, protein 1d10
Authors:Symersky, J, Li, S, Bunzel, R, Schormann, N, Luo, D, Huang, W.Y, Qiu, S, Gray, R, Zhang, Y, Arabashi, A, Lu, S, Luan, C.H, Tsao, J, DeLucas, L, Luo, M, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-05-16
Release date:2004-05-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural genomics of Caenorhabditis elegans: Structure of a protein with unknown function.
To be Published
1MHW
DownloadVisualize
BU of 1mhw by Molmil
Design of non-covalent inhibitors of human cathepsin L. From the 96-residue proregion to optimized tripeptides
Descriptor: 4-biphenylacetyl-Cys-(D)Arg-Tyr-N-(2-phenylethyl) amide, Cathepsin L
Authors:Chowdhury, S, Sivaraman, J, Wang, J, Devanathan, G, Lachance, P, Qi, H, Menard, R, Lefebvre, J, Konishi, Y, Cygler, M, Sulea, T, Purisima, E.O.
Deposit date:2002-08-21
Release date:2002-12-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design of non-covalent inhibitors of human cathepsin L. From the 96-residue proregion to optimized tripeptides
J.Med.Chem., 45, 2002
1W6J
DownloadVisualize
BU of 1w6j by Molmil
Structure of human OSC in complex with Ro 48-8071
Descriptor: LANOSTEROL SYNTHASE, TETRADECANE, [4-({6-[ALLYL(METHYL)AMINO]HEXYL}OXY)-2-FLUOROPHENYL](4-BROMOPHENYL)METHANONE, ...
Authors:Thoma, R, Schulz-Gasch, T, D'Arcy, B, Benz, J, Aebi, J, Dehmlow, H, Hennig, M, Ruf, A.
Deposit date:2004-08-18
Release date:2004-10-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Insight Into Steroid Scaffold Formation from the Structure of Human Oxidosqualene Cyclase
Nature, 432, 2004
2QYU
DownloadVisualize
BU of 2qyu by Molmil
Crystal structure of Salmonella effector protein SopA
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PHOSPHATE ION, Secreted effector protein
Authors:Diao, J, Chen, J.
Deposit date:2007-08-15
Release date:2007-12-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of SopA, a Salmonella effector protein mimicking a eukaryotic ubiquitin ligase.
Nat.Struct.Mol.Biol., 15, 2008
1MI6
DownloadVisualize
BU of 1mi6 by Molmil
Docking of the modified RF2 X-ray structure into the Low Resolution Cryo-EM map of RF2 E.coli 70S Ribosome
Descriptor: peptide chain release factor RF-2
Authors:Rawat, U.B.S, Zavialov, A.V, Sengupta, J, Valle, M, Grassucci, R.A, Linde, J, Vestergaard, B, Ehrenberg, M, Frank, J.
Deposit date:2002-08-22
Release date:2003-01-14
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (12.8 Å)
Cite:A cryo-electron microscopic study of ribosome-bound termination factor RF2
Nature, 421, 2003
1W1I
DownloadVisualize
BU of 1w1i by Molmil
Crystal structure of dipeptidyl peptidase IV (DPPIV or CD26) in complex with adenosine deaminase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Weihofen, W.A, Liu, J, Reutter, W, Saenger, W, Fan, H.
Deposit date:2004-06-22
Release date:2004-09-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Crystal structure of CD26/dipeptidyl-peptidase IV in complex with adenosine deaminase reveals a highly amphiphilic interface.
J. Biol. Chem., 279, 2004
2NMP
DownloadVisualize
BU of 2nmp by Molmil
Crystal structure of human Cystathionine gamma lyase
Descriptor: Cystathionine gamma-lyase, PYRIDOXAL-5'-PHOSPHATE
Authors:Karlberg, T, Uppenberg, J, Arrowsmith, C, Berglund, H, Busam, R.D, Collins, R, Edwards, A, Ericsson, U.B, Flodin, S, Flores, A, Graslund, S, Hallberg, B.M, Hammarstrom, M, Hogbom, M, Johansson, I, Kotenyova, T, Magnusdottir, A, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, van-den-Berg, S, Wallden, K, Weigelt, J, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
Deposit date:2006-10-23
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the inhibition mechanism of human cystathionine gamma-lyase, an enzyme responsible for the production of H(2)S
J.Biol.Chem., 284, 2009
2R0J
DownloadVisualize
BU of 2r0j by Molmil
Crystal structure of the putative ubiquitin conjugating enzyme, PFE1350c, from Plasmodium falciparum
Descriptor: Ubiquitin carrier protein
Authors:Wernimont, A.K, Lew, J, Lin, Y.H, Hassanali, A, Kozieradzki, I, Zhao, Y, Schapira, M, Bochkarev, A, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Hui, R, Brokx, S, Structural Genomics Consortium (SGC)
Deposit date:2007-08-20
Release date:2007-09-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the putative ubiquitin conjugating enzyme, PFE1350c, from Plasmodium falciparum.
To be Published
2QP2
DownloadVisualize
BU of 2qp2 by Molmil
Structure of a MACPF/perforin-like protein
Descriptor: CALCIUM ION, Unknown protein
Authors:Rosado, C.J, Buckle, A.M, Law, R.H.P, Butcher, R.E, Kan, W.T, Bird, C.H, Ung, K, Browne, K.A, Baran, K, Bashtannyk-Puhalovich, T.A, Faux, N.G, Wong, W, Porter, C.J, Pike, R.N, Ellisdon, A.M, Pearce, M.C, Bottomley, S.P, Emsley, J, Smith, A.I, Rossjohn, J, Hartland, E.L, Voskoboinik, I, Trapani, J.A, Bird, P.I, Dunstone, M.A, Whisstock, J.C.
Deposit date:2007-07-22
Release date:2007-09-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A common fold mediates vertebrate defense and bacterial attack
Science, 317, 2007
2QZA
DownloadVisualize
BU of 2qza by Molmil
Crystal structure of Salmonella effector protein SopA
Descriptor: Secreted effector protein
Authors:Diao, J, Chen, J.
Deposit date:2007-08-16
Release date:2007-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of SopA, a Salmonella effector protein mimicking a eukaryotic ubiquitin ligase.
Nat.Struct.Mol.Biol., 15, 2008
6UKK
DownloadVisualize
BU of 6ukk by Molmil
Crystal Structure of a Domain-swapped Fluorogen Activating Protein DiB3 Dimer
Descriptor: Outer membrane lipoprotein Blc, SODIUM ION
Authors:Bozhanova, N.G, Meiler, J.
Deposit date:2019-10-05
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:DiB-splits: nature-guided design of a novel fluorescent labeling split system.
Sci Rep, 10, 2020
7ZU0
DownloadVisualize
BU of 7zu0 by Molmil
HOPS tethering complex from yeast
Descriptor: E3 ubiquitin-protein ligase PEP5, Vacuolar membrane protein PEP3, Vacuolar morphogenesis protein 6, ...
Authors:Shvarev, D, Schoppe, J, Koenig, C, Perz, A, Fuellbrunn, N, Kiontke, S, Langemeyer, L, Januliene, D, Schnelle, K, Kuemmel, D, Froehlich, F, Moeller, A, Ungermann, C.
Deposit date:2022-05-11
Release date:2022-09-28
Last modified:2022-10-12
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structure of the HOPS tethering complex, a lysosomal membrane fusion machinery.
Elife, 11, 2022
2LZG
DownloadVisualize
BU of 2lzg by Molmil
NMR Structure of Mdm2 (6-125) with Pip-1
Descriptor: E3 ubiquitin-protein ligase Mdm2, [(3R,5R,6S)-5-(3-chlorophenyl)-6-(4-chlorophenyl)-1-(cyclopropylmethyl)-2-oxopiperidin-3-yl]acetic acid
Authors:Michelsen, K.B, Jordan, J.B, Lewis, J, Long, A.M, Yang, E, Rew, Y, Zhou, J, Yakowec, P, Schnier, P.D, Huang, X, Poppe, L.
Deposit date:2012-10-02
Release date:2012-11-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Ordering of the N-Terminus of Human MDM2 by Small Molecule Inhibitors.
J.Am.Chem.Soc., 134, 2012
2K0F
DownloadVisualize
BU of 2k0f by Molmil
Calmodulin complexed with calmodulin-binding peptide from smooth muscle myosin light chain kinase
Descriptor: 19-mer peptide from Myosin light chain kinase, CALCIUM ION, calmodulin
Authors:Gsponer, J, Christodoulou, J, Cavalli, A, Bui, J.M, Richter, B, Dobson, C.M, Vendruscolo, M.
Deposit date:2008-02-02
Release date:2008-06-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:A coupled equilibrium shift mechanism in calmodulin-mediated signal transduction
Structure, 16, 2008
6UN9
DownloadVisualize
BU of 6un9 by Molmil
Crystal Structure of the Q7VLF5_HAEDU protein from Haemophilus ducreyi. Northeast Structural Genomics Consortium Target Hdr25
Descriptor: Uncharacterized protein
Authors:Vorobiev, S.M, Seetharaman, J, Kolev, M, Xiao, R, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2019-10-11
Release date:2020-12-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of the Q7VLF5_HAEDU protein from Haemophilus ducreyi. Northeast Structural Genomics Consortium Target Hdr25
To Be Published
7VOJ
DownloadVisualize
BU of 7voj by Molmil
Al-bound structure of the AtALMT1 mutant M60A
Descriptor: ACETIC ACID, ALUMINUM ION, Aluminum-activated malate transporter 1
Authors:Wang, J.
Deposit date:2021-10-14
Release date:2021-12-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of ALMT1-mediated aluminum resistance in Arabidopsis.
Cell Res., 32, 2022
2JPW
DownloadVisualize
BU of 2jpw by Molmil
Solution structure of the bisphosphorylated cardiac specific N-extension of cardiac troponin I
Descriptor: Troponin I, cardiac muscle
Authors:Howarth, J.W, Rosevear, P.R, Meller, J, Solaro, R.J, Trewhella, J.
Deposit date:2007-05-24
Release date:2007-12-11
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Phosphorylation-dependent conformational transition of the cardiac specific N-extension of troponin I in cardiac troponin
J.Mol.Biol., 373, 2007
2RJE
DownloadVisualize
BU of 2rje by Molmil
Crystal structure of L3MBTL1 in complex with H4K20Me2 (residues 17-25), orthorhombic form II
Descriptor: CHLORIDE ION, Histone H4, Lethal(3)malignant brain tumor-like protein
Authors:Allali-Hassani, A, Liu, Y, Herzanych, N, Ouyang, H, Mackenzie, F, Crombet, L, Loppnau, P, Kozieradzki, I, Vedadi, M, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J.R, Structural Genomics Consortium (SGC)
Deposit date:2007-10-14
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:L3MBTL1 recognition of mono- and dimethylated histones.
Nat.Struct.Mol.Biol., 14, 2007
2JS9
DownloadVisualize
BU of 2js9 by Molmil
Structure of caenopore-5 (81 Pro cis conformer)
Descriptor: Saposin-like protein family protein 5
Authors:Mysliwy, J, Grotzinger, J.
Deposit date:2007-07-02
Release date:2008-10-14
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Caenopore-5: the three-dimensional structure of an antimicrobial protein from Caenorhabditis elegans.
Dev.Comp.Immunol., 34, 2010
4M1Q
DownloadVisualize
BU of 4m1q by Molmil
Crystal structure of L-lactate dehydrogenase from Bacillus selenitireducens MLS10, NYSGRC Target 029814.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, L-lactate dehydrogenase, PHOSPHATE ION
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-08-03
Release date:2013-08-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of L-lactate dehydrogenase from Bacillus selenitireducens MLS10, NYSGRC Target 029814.
To be Published
8A3N
DownloadVisualize
BU of 8a3n by Molmil
Geissoschizine synthase from Catharanthus roseus - binary complex with NADP+
Descriptor: Geissoschizine synthase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ZINC ION
Authors:Langley, C, Tatsis, E, Hong, B, Nakamura, Y, Kamileen, M.O, Paetz, C, Stevenson, C.E.M, Basquin, J, Lawson, D.M, Caputi, L, O'Connor, S.E.
Deposit date:2022-06-08
Release date:2022-10-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Expansion of the Catalytic Repertoire of Alcohol Dehydrogenases in Plant Metabolism.
Angew.Chem.Int.Ed.Engl., 61, 2022

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon