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PDB: 42254 results

6CRQ
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BU of 6crq by Molmil
Glutaraldehyde-treated BG505 SOSIP.664 Env in complex with PGV04 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
Authors:Pallesen, J, Ward, A.B.
Deposit date:2018-03-19
Release date:2018-04-18
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural and immunologic correlates of chemically stabilized HIV-1 envelope glycoproteins.
PLoS Pathog., 14, 2018
2ET2
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BU of 2et2 by Molmil
Crystal structure of an Asn to Ala mutant of Winged Bean Chymotrypsin Inhibitor protein
Descriptor: Chymotrypsin inhibitor 3, NICKEL (II) ION, SULFATE ION
Authors:Dattagupta, J.K, Sen, U, Dasgupta, J, Khamrui, S.
Deposit date:2005-10-27
Release date:2006-06-13
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Spacer Asn Determines the Fate of Kunitz (STI) Inhibitors, as Revealed by Structural and Biochemical Studies on WCI Mutants.
Biochemistry, 45, 2006
7VG2
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BU of 7vg2 by Molmil
Cryo-EM structure of Arabidopsis DCL3 in complex with a 40-bp RNA
Descriptor: CALCIUM ION, Dicer-like 3, TAS1a forward strand (5'-phosphorylation), ...
Authors:Wang, Q, Du, J.
Deposit date:2021-09-14
Release date:2021-10-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of siRNA production by a plant Dicer-RNA complex in dicing-competent conformation.
Science, 374, 2021
7V9M
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BU of 7v9m by Molmil
Cryo-EM structure of the GHRH-bound human GHRHR splice variant 1 complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Cong, Z.T, Zhou, F.L, Zhang, C, Zou, X.Y, Zhang, H.B, Wang, Y.Z, Zhou, Q.T, Cai, X.Q, Liu, Q.F, Li, J, Shao, L.J, Mao, C.Y, Wang, X, Wu, J.H, Xia, T, Zhao, L.H, Jiang, H.L, Zhang, Y, Xu, H.E, Chen, X, Yang, D.H, Wang, M.W.
Deposit date:2021-08-26
Release date:2021-10-20
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Constitutive signal bias mediated by the human GHRHR splice variant 1.
Proc.Natl.Acad.Sci.USA, 118, 2021
2GRY
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BU of 2gry by Molmil
Crystal structure of the human KIF2 motor domain in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF2, MAGNESIUM ION, ...
Authors:Wang, J, Shen, Y, Tempel, W, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2006-04-25
Release date:2006-05-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of the human KIF2 motor domain in complex with ADP
to be published
7VG3
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BU of 7vg3 by Molmil
Cryo-EM structure of Arabidopsis DCL3 in complex with a 30-bp RNA
Descriptor: CALCIUM ION, Dicer-like 3, TAS1a RNA forward strand (5'-phosphorylated), ...
Authors:Wang, Q, Du, J.
Deposit date:2021-09-14
Release date:2021-10-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Mechanism of siRNA production by a plant Dicer-RNA complex in dicing-competent conformation.
Science, 374, 2021
6D3A
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BU of 6d3a by Molmil
Structure of human ARH3 D314E bound to ADP-ribose and magnesium
Descriptor: MAGNESIUM ION, Poly(ADP-ribose) glycohydrolase ARH3, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Pourfarjam, Y, Ventura, J, Kurinov, I, Kim, I.K.
Deposit date:2018-04-15
Release date:2018-06-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.60001016 Å)
Cite:Structure of human ADP-ribosyl-acceptor hydrolase 3 bound to ADP-ribose reveals a conformational switch that enables specific substrate recognition.
J.Biol.Chem., 293, 2018
7VOJ
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BU of 7voj by Molmil
Al-bound structure of the AtALMT1 mutant M60A
Descriptor: ACETIC ACID, ALUMINUM ION, Aluminum-activated malate transporter 1
Authors:Wang, J.
Deposit date:2021-10-14
Release date:2021-12-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of ALMT1-mediated aluminum resistance in Arabidopsis.
Cell Res., 32, 2022
2F33
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BU of 2f33 by Molmil
NMR solution structure of Ca2+-loaded calbindin D28K
Descriptor: Calbindin
Authors:Kojetin, D.J, Venters, R.A, Kordys, D.R, Thompson, R.J, Kumar, R, Cavanagh, J.
Deposit date:2005-11-18
Release date:2006-07-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure, binding interface and hydrophobic transitions of Ca(2+)-loaded calbindin-D(28K).
Nat.Struct.Mol.Biol., 13, 2006
7DF1
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BU of 7df1 by Molmil
Crystal structure of human CD98 heavy chain extracellular domain in complex with S1-F4 scFv
Descriptor: 4F2 cell-surface antigen heavy chain, IGL c2062_light_IGKV4-1_IGKJ5, S1-F4 VH
Authors:Liu, X, Ding, J, Sui, J, Tian, X.
Deposit date:2020-11-06
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.806 Å)
Cite:An anti-CD98 antibody displaying pH-dependent Fc-mediated tumour-specific activity against multiple cancers in CD98-humanized mice.
Nat Biomed Eng, 2022
2KMJ
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BU of 2kmj by Molmil
High resolution NMR solution structure of a complex of HIV-2 TAR RNA and a synthetic tripeptide in a 1:2 stoichiometry
Descriptor: Pyrimidinylpeptide, RNA (28-MER)
Authors:Ferner, J, Suhartono, M, Breitung, S, Jonker, H.R.A, Hennig, M, Woehnert, J, Goebel, M, Schwalbe, H.
Deposit date:2009-07-30
Release date:2009-08-18
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Structures of HIV TAR RNA-ligand complexes reveal higher binding stoichiometries.
Chembiochem, 10, 2009
6CUR
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BU of 6cur by Molmil
Ras:SOS:Ras in complex with a small molecule activator
Descriptor: FORMIC ACID, GLYCEROL, GTPase HRas, ...
Authors:Phan, J, Abbott, J, Fesik, S.W.
Deposit date:2018-03-26
Release date:2019-02-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Discovery of Quinazolines That Activate SOS1-Mediated Nucleotide Exchange on RAS.
ACS Med Chem Lett, 9, 2018
7X9G
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BU of 7x9g by Molmil
Crystal structure of human EDA and EDAR
Descriptor: Ectodysplasin-A, secreted form, Tumor necrosis factor receptor superfamily member EDAR
Authors:Yu, K, Wan, F, Huang, C, Wu, J, Lei, M.
Deposit date:2022-03-15
Release date:2023-02-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into pathogenic mechanism of hypohidrotic ectodermal dysplasia caused by ectodysplasin A variants.
Nat Commun, 14, 2023
5UF7
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BU of 5uf7 by Molmil
CRYSTAL STRUCTURE OF MUNC13-1 MUN DOMAIN
Descriptor: Protein unc-13 homolog A
Authors:Tomchick, D.R, Rizo, J, Xu, J.
Deposit date:2017-01-03
Release date:2017-02-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.896 Å)
Cite:Mechanistic insights into neurotransmitter release and presynaptic plasticity from the crystal structure of Munc13-1 C1C2BMUN.
Elife, 6, 2017
7WVZ
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BU of 7wvz by Molmil
CalA3_modular PKS_KS-AT-DH-KR
Descriptor: Beta-ketoacyl-acyl-carrier-protein synthase I
Authors:Wang, J, Wang, Z.
Deposit date:2022-02-12
Release date:2023-02-22
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:C-N bond formation by a polyketide synthase.
Nat Commun, 14, 2023
6CUO
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BU of 6cuo by Molmil
Ras:SOS:Ras in complex with a small molecule activator
Descriptor: FORMIC ACID, GLYCEROL, GTPase HRas, ...
Authors:Phan, J, Abbott, J, Fesik, S.W.
Deposit date:2018-03-26
Release date:2019-02-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Discovery of Quinazolines That Activate SOS1-Mediated Nucleotide Exchange on RAS.
ACS Med Chem Lett, 9, 2018
6D2T
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BU of 6d2t by Molmil
HLA-B*57:01 presenting LALLTGVRW
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-57 alpha chain, ...
Authors:Vivian, J.P, Rossjohn, J.
Deposit date:2018-04-13
Release date:2018-10-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A subset of HLA-I peptides are not genomically templated: Evidence for cis- and trans-spliced peptide ligands.
Sci Immunol, 3, 2018
7XKZ
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BU of 7xkz by Molmil
Solution structure of subunit epsilon of the Mycobacterium abscessus F-ATP synthase
Descriptor: ATP synthase epsilon chain
Authors:Shin, J, Grueber, G, Harikishore, A, Wong, C.F, Prya, R, Dick, T.
Deposit date:2022-04-20
Release date:2023-03-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Atomic solution structure of Mycobacterium abscessus F-ATP synthase subunit epsilon and identification of Ep1MabF1 as a targeted inhibitor.
Febs J., 289, 2022
3TZV
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BU of 3tzv by Molmil
Crystal structure of an iNKT TCR in complex with CD1d-lysophosphatidylcholine
Descriptor: (4R,7R,18E)-4,7-dihydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphaheptacos-18-en-1-aminium 4-oxide, Antigen-presenting glycoprotein CD1d, Beta-2-microglobulin, ...
Authors:Lopez-Sagaseta, J, Adams, E.J.
Deposit date:2011-09-27
Release date:2012-04-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.056 Å)
Cite:Lysophospholipid presentation by CD1d and recognition by a human Natural Killer T-cell receptor.
Embo J., 31, 2012
6D29
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BU of 6d29 by Molmil
HLA-B*57:01 presenting TSMSFVPRPW
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-57 alpha chain, ...
Authors:Vivian, J.P, Rossjohn, J.
Deposit date:2018-04-13
Release date:2018-10-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:A subset of HLA-I peptides are not genomically templated: Evidence for cis- and trans-spliced peptide ligands.
Sci Immunol, 3, 2018
2P5S
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BU of 2p5s by Molmil
RAB domain of human RASEF in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, RAS and EF-hand domain containing, UNKNOWN ATOM OR ION
Authors:Zhu, H, Wang, J, Shen, Y, Tempel, W, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2007-03-16
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:RAB domain of human RASEF in complex with GDP
To be Published
2Q0V
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BU of 2q0v by Molmil
Crystal structure of ubiquitin conjugating enzyme E2, putative, from Plasmodium falciparum
Descriptor: PHOSPHATE ION, Ubiquitin-conjugating enzyme E2, putative
Authors:Wernimont, A.K, Lew, J, Hassanali, A, Lin, L, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Brokx, S, Structural Genomics Consortium (SGC)
Deposit date:2007-05-22
Release date:2007-06-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of ubiquitin conjugating enzyme E2, putative, from Plasmodium falciparum.
To be Published
2H9C
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BU of 2h9c by Molmil
Native Crystal Structure of the Isochorismate-Pyruvate Lyase from Pseudomonas aeruginosa
Descriptor: NITRATE ION, Salicylate biosynthesis protein pchB
Authors:Lamb, A.L, Zaitseva, J, Lu, J.
Deposit date:2006-06-09
Release date:2006-08-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Two Crystal Structures of the Isochorismate Pyruvate Lyase from Pseudomonas aeruginosa.
J.Biol.Chem., 281, 2006
3U0P
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BU of 3u0p by Molmil
Crystal structure of human CD1d-lysophosphatidylcholine
Descriptor: (4R,7R,18E)-4,7-dihydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphaheptacos-18-en-1-aminium 4-oxide, Antigen-presenting glycoprotein CD1d, Beta-2-microglobulin, ...
Authors:Lopez-Sagaseta, J, Sibener, L.V, Adams, E.J.
Deposit date:2011-09-28
Release date:2012-04-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Lysophospholipid presentation by CD1d and recognition by a human Natural Killer T-cell receptor.
Embo J., 31, 2012
7XNY
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BU of 7xny by Molmil
High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Cheng, J, Beckmann, R.
Deposit date:2022-04-30
Release date:2023-04-05
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:A Dynamic rRNA Ribomethylome Drives Stemness in Acute Myeloid Leukemia.
Cancer Discov, 13, 2023

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