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PDB: 9660 件

8HIN
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Structure of human SGLT2-MAP17 complex with Phlorizin
分子名称: 1-[2-[(2S,3R,4S,5S,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,6-bis(oxidanyl)phenyl]-3-(4-hydroxyphenyl)propan-1-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, PDZK1-interacting protein 1, ...
著者Hiraizumi, M, Kishida, H, Miyaguchi, I, Nureki, O.
登録日2022-11-21
公開日2023-11-22
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Transport and inhibition mechanism of the human SGLT2-MAP17 glucose transporter.
Nat.Struct.Mol.Biol., 31, 2024
8VC8
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Crystal structure of heme-loaded design: HEM_3.C9
分子名称: HEM_3.C9, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Kalvet, I, Bera, A.K, Baker, D.
登録日2023-12-13
公開日2024-03-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Generalized biomolecular modeling and design with RoseTTAFold All-Atom.
Science, 384, 2024
7ROX
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BthTX-I complexed with inhibitor MMV
分子名称: 12-methoxy-Nb-methylvoachalotine, Basic phospholipase A2 homolog bothropstoxin-I
著者Borges, R.J, De Marino, I, Uson, I, Fontes, M.R.M.
登録日2021-08-02
公開日2022-11-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and functional studies of a snake venom phospholipase A 2 -like protein complexed to an inhibitor from Tabernaemontana catharinensis.
Biochimie, 206, 2023
8J7R
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BU of 8j7r by Molmil
Cryo-EM structure of the J-K-St region of EMCV IRES in complex with eIF4G-HEAT1 and eIF4A (J-K-St/eIF4G focused)
分子名称: Eukaryotic translation initiation factor 4 gamma 1, IRES RNA (J-K-St), MAGNESIUM ION
著者Suzuki, H, Fujiyoshi, Y, Imai, S, Shimada, I.
登録日2023-04-28
公開日2023-08-02
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Dynamically regulated two-site interaction of viral RNA to capture host translation initiation factor.
Nat Commun, 14, 2023
8J3S
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BU of 8j3s by Molmil
Complex structure of human cytomegalovirus protease and a macrocyclic peptide ligand
分子名称: Assemblin, PHE-ILE-THR-GLY-HIS-TYR-TRP-VAL-ARG-PHE-LEU-PRO-CYS-GLY
著者Yoshida, S, Sako, Y, Nikaido, E, Ueda, T, Kozono, I, Ichihashi, Y, Nakahashi, A, Onishi, M, Yamatsu, Y, Kato, T, Nishikawa, J, Tachibana, Y.
登録日2023-04-18
公開日2023-11-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Peptide-to-Small Molecule: Discovery of Non-Covalent, Active-Site Inhibitors of beta-Herpesvirus Proteases.
Acs Med.Chem.Lett., 14, 2023
8J3T
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BU of 8j3t by Molmil
Complex structure of human cytomegalovirus protease and a non-covalent small-molecule ligand
分子名称: (4R)-1-[1-[(S)-[1-cyclopentyl-3-(2-methylphenyl)pyrazol-4-yl]-(4-methylphenyl)methyl]-2-oxidanylidene-pyridin-3-yl]-3-methyl-2-oxidanylidene-N-(3-oxidanylidene-2-azabicyclo[2.2.2]octan-4-yl)imidazolidine-4-carboxamide, Assemblin
著者Yoshida, S, Sako, Y, Nikaido, E, Ueda, T, Kozono, I, Ichihashi, Y, Nakahashi, A, Onishi, M, Yamatsu, Y, Kato, T, Nishikawa, J, Tachibana, Y.
登録日2023-04-18
公開日2023-11-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Peptide-to-Small Molecule: Discovery of Non-Covalent, Active-Site Inhibitors of beta-Herpesvirus Proteases.
Acs Med.Chem.Lett., 14, 2023
8JMR
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Crystal structure of hinokiresinol synthase in complex with 1,7-bis(4-hydroxyphenyl)hepta-1,6-dien-3-one
分子名称: 1,7-bis(4-hydroxyphenyl)hepta-1,6-dien-3-one, Hinokiresinol synthase alpha subunit, Hinokiresinol synthase beta subunit, ...
著者Ding, Y, Ushimaru, R, Mori, T, Abe, I.
登録日2023-06-05
公開日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and Mechanistic Insights into the C-C Bond-Forming Rearrangement Reaction Catalyzed by Heterodimeric Hinokiresinol Synthase.
J.Am.Chem.Soc., 145, 2023
8JMQ
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Crystal structure of hinokiresinol synthase
分子名称: Hinokiresinol synthase alpha subunit, Hinokiresinol synthase beta subunit
著者Ding, Y, Ushimaru, R, Mori, T, Abe, I.
登録日2023-06-05
公開日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and Mechanistic Insights into the C-C Bond-Forming Rearrangement Reaction Catalyzed by Heterodimeric Hinokiresinol Synthase.
J.Am.Chem.Soc., 145, 2023
8BIZ
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BU of 8biz by Molmil
Cystathionine gamma-lyase from Toxoplasma gondii in complex with cysteine
分子名称: CYSTEINE, Cystathionine beta-lyase, putative, ...
著者Fernandez-Rodriguez, C, Conter, C, Oyenarte, I, Favretto, F, Quintana, I, Martinez-Chantar, M.L, Astegno, A, Martinez-Cruz, L.A.
登録日2022-11-02
公開日2023-04-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.891 Å)
主引用文献Structural basis of the inhibition of cystathionine gamma-lyase from Toxoplasma gondii by propargylglycine and cysteine.
Protein Sci., 32, 2023
8BIW
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BU of 8biw by Molmil
Cystathionine gamma-lyase N360S mutant in complex with DL-propargylglycine
分子名称: (2S)-2-aminopent-4-enoic acid, Cystathionine beta-lyase, putative, ...
著者Fernandez-Rodriguez, C, Conter, C, Oyenarte, I, Favretto, F, Quintana, I, Martinez-Chantar, M.L, Astegno, A, Martinez-Cruz, L.A.
登録日2022-11-02
公開日2023-04-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.981 Å)
主引用文献Structural basis of the inhibition of cystathionine gamma-lyase from Toxoplasma gondii by propargylglycine and cysteine.
Protein Sci., 32, 2023
8BIU
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BU of 8biu by Molmil
Cystathionine gamma-lyase in complex with cystathionine
分子名称: 2-KETOBUTYRIC ACID, Cystathionine beta-lyase, putative, ...
著者Fernandez-Rodriguez, C, Conter, C, Oyenarte, I, Favretto, F, Quintana, I, Martinez-Chantar, M.L, Astegno, A, Martinez-Cruz, L.A.
登録日2022-11-02
公開日2023-04-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Structural basis of the inhibition of cystathionine gamma-lyase from Toxoplasma gondii by propargylglycine and cysteine.
Protein Sci., 32, 2023
8BIS
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BU of 8bis by Molmil
Crystal structure of cystathionine gamma-lyase from Toxoplasma gondii in complex with DL-propargylglycine
分子名称: (2S)-2-aminopent-4-enoic acid, Cystathionine beta-lyase, putative, ...
著者Fernandez-Rodriguez, C, Conter, C, Oyenarte, I, Favretto, F, Quintana, I, Martinez-Chantar, M.L, Astegno, A, Martinez-Cruz, L.A.
登録日2022-11-02
公開日2023-04-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.266 Å)
主引用文献Structural basis of the inhibition of cystathionine gamma-lyase from Toxoplasma gondii by propargylglycine and cysteine.
Protein Sci., 32, 2023
8BIV
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BU of 8biv by Molmil
Cystathionine gamma-lyase N360S mutant from Toxoplasma gondii
分子名称: Cystathionine beta-lyase, putative, GLYCEROL, ...
著者Fernandez-Rodriguez, C, Conter, C, Oyenarte, I, Favretto, F, Quintana, I, Martinez-Chantar, M.L, Astegno, A, Martinez-Cruz, L.A.
登録日2022-11-02
公開日2023-04-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Structural basis of the inhibition of cystathionine gamma-lyase from Toxoplasma gondii by propargylglycine and cysteine.
Protein Sci., 32, 2023
8BIX
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BU of 8bix by Molmil
Cystathionine gamma-lyase N360S mutant from Toxoplasma gondii in complex with cystathionine
分子名称: 2-AMINO-4-MERCAPTO-BUTYRIC ACID, Cystathionine beta-lyase, putative, ...
著者Fernandez-Rodriguez, C, Conter, C, Oyenarte, I, Favretto, F, Quintana, I, Martinez-Chantar, M.L, Astegno, A, Martinez-Cruz, L.A.
登録日2022-11-02
公開日2023-04-12
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structural basis of the inhibition of cystathionine gamma-lyase from Toxoplasma gondii by propargylglycine and cysteine.
Protein Sci., 32, 2023
6M48
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BU of 6m48 by Molmil
Crystal structure of pilus adhesin, SpaC from Lactobacillus rhamnosus GG - P21212 form
分子名称: CHLORIDE ION, MAGNESIUM ION, SpaC
著者Kant, A, Palva, A, Von Ossowaski, I, Krishnan, V.
登録日2020-03-05
公開日2020-07-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of lactobacillar SpaC reveals an atypical five-domain pilus tip adhesin: Exposing its substrate-binding and assembly in SpaCBA pili.
J.Struct.Biol., 211, 2020
5E3B
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BU of 5e3b by Molmil
Structure of macrodomain protein from Streptomyces coelicolor
分子名称: 1,2-ETHANEDIOL, Macrodomain protein, SODIUM ION
著者Lalic, J, Posavec Marjanovic, M, Perina, D, Sabljic, I, Zaja, R, Plese, B, Imesek, M, Bucca, G, Ahel, M, Cetkovic, H, Luic, M, Mikoc, A, Ahel, I.
登録日2015-10-02
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Disruption of Macrodomain Protein SCO6735 Increases Antibiotic Production in Streptomyces coelicolor.
J.Biol.Chem., 291, 2016
8CP6
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Type six secretion system exported effector 5 (Tse5)
分子名称: Toxin protein Tse5
著者Gonzalez-Magana, A, Tascon, I, Ubarretxena-Belandia, I, Albesa-Jove, D.
登録日2023-03-01
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (2.45 Å)
主引用文献Structural and functional insights into the delivery of a bacterial Rhs pore-forming toxin to the membrane.
Nat Commun, 14, 2023
8CR1
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BU of 8cr1 by Molmil
Homo sapiens Get1/Get2 heterotetramer in complex with a Get3 dimer
分子名称: ATPase ASNA1, Guided entry of tail-anchored proteins factor CAMLG,Guided entry of tail-anchored proteins factor 1,GET2-GET1, ZINC ION
著者McDowell, M.A, Heimes, M, Wild, K, Sinning, I.
登録日2023-03-07
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献The GET insertase exhibits conformational plasticity and induces membrane thinning.
Nat Commun, 14, 2023
4Y6M
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BU of 4y6m by Molmil
Structure of plasmepsin II from Plasmodium falciparum complexed with inhibitor PG418
分子名称: GLYCEROL, Plasmepsin-2, ~{N}1-[(~{Z},3~{R})-4-[2-(3-methoxyphenyl)propan-2-ylamino]-3-oxidanyl-1-phenyl-but-1-en-2-yl]-5-piperidin-1-yl-~{N}3,~{N}3-dipropyl-benzene-1,3-dicarboxamide
著者Recacha, R, Akopjana, I, Tars, K, Jaudzems, K.
登録日2015-02-13
公開日2015-12-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Structures of plasmepsin II from Plasmodium falciparum in complex with two hydroxyethylamine-based inhibitors.
Acta Crystallogr.,Sect.F, 71, 2015
4ZDV
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BU of 4zdv by Molmil
Crystal structure of LC3 in complex with FAM134B LIR
分子名称: Microtubule-associated proteins 1A/1B light chain 3A
著者Khaminets, A, Grumati, P, Dikic, I, Akutsu, M.
登録日2015-04-19
公開日2015-06-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Regulation of endoplasmic reticulum turnover by selective autophagy.
Nature, 522, 2015
4W5W
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BU of 4w5w by Molmil
Rubisco activase from Arabidopsis thaliana
分子名称: Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic, SULFATE ION
著者Hasse, D, Larsson, A.M, Andersson, I.
登録日2014-08-19
公開日2015-04-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of Arabidopsis thaliana Rubisco activase
Acta Crystallogr.,Sect.D, 71, 2015
8R8D
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BU of 8r8d by Molmil
Cryo-EM structure of coagulation factor beta-XIIa in complex with the garadacimab Fab fragment (symmetric dimer)
分子名称: Coagulation factor XII, Garadacimab heavy chain variable region, Garadacimab light chain variable region, ...
著者Drulyte, I.
登録日2023-11-29
公開日2023-12-13
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis for inhibition of beta-FXIIa by garadacimab
To Be Published
8R05
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Photorhabdus lamondii ClpP in complex with the natural product beta-lactone inhibitor Cystargolide A at 2.5 A resolution
分子名称: ATP-dependent Clp protease proteolytic subunit, Cystargolide A (bound)
著者Illigmann, A, Vielberg, M.-T, Lakemeyer, M, Wolf, F, Staudt, N, Dema, T, Stange, P, Liebhart, E, Kuttenlochner, W, Kulik, A, Malik, I, Grond, S, Sieber, S.A, Groll, M, Kaysser, L, Broetz-Oesterhelt, H.
登録日2023-10-30
公開日2023-12-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of Staphylococcus aureus ClpP Bound to the Covalent Active-Site Inhibitor Cystargolide A.
Angew.Chem.Int.Ed.Engl., 63, 2024
8R03
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Staphylococcus aureus ClpP in complex with the natural product beta-lactone inhibitor Cystargolide A at 2.0 A resolution
分子名称: 1,2-ETHANEDIOL, ATP-dependent Clp protease proteolytic subunit, Cystargolide A (bound)
著者Illigmann, A, Vielberg, M.-T, Lakemeyer, M, Wolf, F, Staudt, N, Dema, T, Stange, P, Liebhart, E, Kuttenlochner, W, Kulik, A, Malik, I, Grond, S, Sieber, S.A, Groll, M, Kaysser, L, Broetz-Oesterhelt, H.
登録日2023-10-30
公開日2023-12-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of Staphylococcus aureus ClpP Bound to the Covalent Active-Site Inhibitor Cystargolide A.
Angew.Chem.Int.Ed.Engl., 63, 2024
8R04
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BU of 8r04 by Molmil
Structure of Staphylococcus aureus ClpP Bound to the Covalent Active Site Inhibitor Cystargolide A
分子名称: ATP-dependent Clp protease proteolytic subunit, Cystargolide A (bound)
著者Illigmann, A, Vielberg, M.-T, Lakemeyer, M, Wolf, F, Staudt, N, Dema, T, Stange, P, Liebhart, E, Kuttenlochner, W, Kulik, A, Malik, I, Grond, S, Sieber, S.A, Groll, M, Kaysser, L, Broetz-Oesterhelt, H.
登録日2023-10-30
公開日2023-12-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of Staphylococcus aureus ClpP Bound to the Covalent Active-Site Inhibitor Cystargolide A.
Angew.Chem.Int.Ed.Engl., 63, 2024

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件を2024-07-31に公開中

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