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PDB: 31 results

6LXY
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BU of 6lxy by Molmil
IRAK4 in complex with inhibitor
Descriptor: Interleukin-1 receptor-associated kinase 4, N-[(2R)-2-fluoranyl-3-methyl-3-oxidanyl-butyl]-6-[(6-fluoranylpyrazolo[1,5-a]pyrimidin-5-yl)amino]-4-(propan-2-ylamino)pyridine-3-carboxamide, SULFATE ION
Authors:Ghosh, K, Bose, S.
Deposit date:2020-02-12
Release date:2020-11-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Optimization of Nicotinamides as Potent and Selective IRAK4 Inhibitors with Efficacy in a Murine Model of Psoriasis.
Acs Med.Chem.Lett., 11, 2020
7D5L
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Discovery of BMS-986144, a Third Generation, Pan Genotype NS3/4A Protease Inhibitor for the Treatment of Hepatitis C Virus Infection
Descriptor: NS3/4A Protease, ZINC ION, [1,1,1-tris(fluoranyl)-2-methyl-propan-2-yl] ~{N}-[(1~{S},4~{R},6~{S},7~{Z},11~{R},13~{R},14~{S},18~{R})-13-ethyl-18-(7-fluoranyl-6-methoxy-isoquinolin-1-yl)oxy-11-methyl-4-[(1-methylcyclopropyl)sulfonylcarbamoyl]-2,15-bis(oxidanylidene)-3,16-diazatricyclo[14.3.0.0^{4,6}]nonadec-7-en-14-yl]carbamate
Authors:Ghosh, K, Anumula, R, Kumar, A.
Deposit date:2020-09-26
Release date:2020-12-16
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Discovery of BMS-986144, a Third-Generation, Pan-Genotype NS3/4A Protease Inhibitor for the Treatment of Hepatitis C Virus Infection.
J.Med.Chem., 63, 2020
8IZC
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BU of 8izc by Molmil
Human CK1 Delta Kinase structure bound to Inhibitor
Descriptor: Casein kinase I isoform delta, SULFATE ION, ~{N}5-~{tert}-butyl-2-(3-chloranyl-4-fluoranyl-phenyl)-6,7-dihydro-4~{H}-pyrazolo[1,5-a]pyrazine-3,5-dicarboxamide
Authors:Ghosh, K.
Deposit date:2023-04-06
Release date:2024-04-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Discovery of BMS-986164, a Potent, Selective and Orally Efficacious CK1d/e/a Inhibitor from Pyrazolo-Piperazine Chemotype
To Be Published
7DF6
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Mouse Galectin-3 CRD in complex with novel tetrahydropyran-based thiodisaccharide mimic inhibitor
Descriptor: (2R,3R,4S,5R,6S)-2-(hydroxymethyl)-5-methoxy-6-[(3R,4R,5S)-4-oxidanyl-5-(4-pyrimidin-5-yl-1,2,3-triazol-1-yl)oxan-3-yl]sulfanyl-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxan-3-ol, Galectin-3
Authors:Ghosh, K, Kumar, A.
Deposit date:2020-11-06
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Synthesis, Structure-Activity Relationships, and In Vivo Evaluation of Novel Tetrahydropyran-Based Thiodisaccharide Mimics as Galectin-3 Inhibitors.
J.Med.Chem., 64, 2021
7DF5
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Human Galectin-3 CRD in complex with novel tetrahydropyran-based thiodisaccharide mimic inhibitor
Descriptor: (2R,3R,4S,5R,6S)-2-(hydroxymethyl)-5-methoxy-6-[(3R,4R,5S)-4-oxidanyl-5-(4-pyrimidin-5-yl-1,2,3-triazol-1-yl)oxan-3-yl]sulfanyl-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxan-3-ol, CHLORIDE ION, Galectin-3, ...
Authors:Ghosh, K, Kumar, A.
Deposit date:2020-11-06
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Synthesis, Structure-Activity Relationships, and In Vivo Evaluation of Novel Tetrahydropyran-Based Thiodisaccharide Mimics as Galectin-3 Inhibitors.
J.Med.Chem., 64, 2021
3C29
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Cre-loxP Synaptic structure
Descriptor: LoxP DNA, chain C,, chain D,F, ...
Authors:Ghosh, K, Van Duyne, G.D.
Deposit date:2008-01-24
Release date:2009-02-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Synapsis study in detail
To be Published
3C28
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BU of 3c28 by Molmil
Crystal structure of the product synapse complex
Descriptor: LoxP DNA, chain C, chain D, ...
Authors:Ghosh, K, Van Duyne, G.D.
Deposit date:2008-01-24
Release date:2009-02-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Detailed study on Synapsis in Cre-loxP recombination reaction
To be Published
4KJG
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BU of 4kjg by Molmil
Structure of Rat Intestinal Alkaline Phosphatase expressed in insect cell
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ghosh, K, Anumula, R.K, Laksmaiah, B.K.
Deposit date:2013-05-03
Release date:2013-10-16
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal structure of rat intestinal alkaline phosphatase - Role of crown domain in mammalian alkaline phosphatases.
J.Struct.Biol., 184, 2013
4KJD
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RatIntestinal AP expressed in E. coli
Descriptor: GLYCEROL, Intestinal-type alkaline phosphatase 1, MAGNESIUM ION
Authors:Ghosh, K, Anumula, R.K, Laksmaiah, B.K.
Deposit date:2013-05-03
Release date:2013-10-16
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of rat intestinal alkaline phosphatase - Role of crown domain in mammalian alkaline phosphatases.
J.Struct.Biol., 184, 2013
2HOI
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BU of 2hoi by Molmil
Crystal structure of the tetrameric pre-cleavage synaptic complex in the cre-loxp site-specific recombination
Descriptor: LoxP DNA, Recombinase Cre
Authors:Ghosh, K, Van Duyne, G.D.
Deposit date:2006-07-14
Release date:2007-06-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Synapsis of loxP sites by Cre recombinase.
J.Biol.Chem., 282, 2007
2HOF
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BU of 2hof by Molmil
Crystal structure of the pre-cleavage synaptic complex in the cre-loxp site-specific recombination
Descriptor: LoxP DNA, Recombinase cre
Authors:Ghosh, K, Van Duyne, G.D.
Deposit date:2006-07-14
Release date:2007-06-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Synapsis of loxP sites by Cre recombinase.
J.Biol.Chem., 282, 2007
1XNS
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BU of 1xns by Molmil
Peptide trapped Holliday junction intermediate in Cre-loxP recombination
Descriptor: Recombinase CRE, loxP DNA
Authors:Ghosh, K, Lau, C.K, Guo, F, Segall, A.M, Van Duyne, G.D.
Deposit date:2004-10-05
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Peptide trapping of the Holliday junction intermediate in Cre-loxP site-specific recombination.
J.Biol.Chem., 280, 2005
1XO0
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BU of 1xo0 by Molmil
High resolution structure of the holliday junction intermediate in cre-loxp site-specific recombination
Descriptor: Recombinase CRE, loxP
Authors:Ghosh, K, Lau, C.K, Guo, F, Segall, A.M, Van Duyne, G.D.
Deposit date:2004-10-05
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Peptide trapping of the Holliday junction intermediate in Cre-loxP site-specific recombination.
J.Biol.Chem., 280, 2005
4FLC
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BU of 4flc by Molmil
Structural and Biochemical Characterization of Human Adenylosuccinate Lyase (ADSL) and the R303C ADSL Deficiency Associated Mutation
Descriptor: Adenylosuccinate lyase
Authors:Deaton, M.K, Ray, S.P, Capodagli, G.C, Calkins, L.A.F, Sawle, L, Ghosh, K, Patterson, D, Pegan, S.D.
Deposit date:2012-06-14
Release date:2012-08-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and Biochemical Characterization of Human Adenylosuccinate Lyase (ADSL) and the R303C ADSL Deficiency-Associated Mutation.
Biochemistry, 51, 2012
8Z1S
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BU of 8z1s by Molmil
Crystal structure of mouse Galectin-3 in complex with small molecule inhibitor
Descriptor: (2~{S},3~{R},4~{R},5~{R},6~{R})-4-[4-[4-chloranyl-3,5-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-[4-[5-chloranyl-2-(trifluoromethyl)phenyl]-5-methyl-1,2,4-triazol-3-yl]-6-(hydroxymethyl)oxane-3,5-diol, CHLORIDE ION, Galectin-3
Authors:Amit, K, Swetha, R, Ghosh, K.
Deposit date:2024-04-11
Release date:2025-03-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Atropisomerism Observed in Galactose-Based Monosaccharide Inhibitors of Galectin-3 Comprising 2-Methyl-4-phenyl-2,4-dihydro-3 H -1,2,4-triazole-3-thione.
J.Med.Chem., 67, 2024
8Z1T
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BU of 8z1t by Molmil
Crystal structure of mouse Galectin-3 in complex with small molecule inhibitor
Descriptor: (2~{S},3~{R},4~{R},5~{R},6~{R})-4-[4-[4-chloranyl-3,5-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-[4-[5-chloranyl-2-(trifluoromethyl)phenyl]-5-methyl-1,2,4-triazol-3-yl]-6-(hydroxymethyl)oxane-3,5-diol, CHLORIDE ION, Galectin-3
Authors:Amit, K, Swetha, R, Ghosh, K.
Deposit date:2024-04-12
Release date:2025-03-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Atropisomerism Observed in Galactose-Based Monosaccharide Inhibitors of Galectin-3 Comprising 2-Methyl-4-phenyl-2,4-dihydro-3 H -1,2,4-triazole-3-thione.
J.Med.Chem., 67, 2024
8Z25
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BU of 8z25 by Molmil
Crystal structure of mouse Galectin-3 in complex with small molecule inhibitor
Descriptor: 5-[(2~{S},3~{R},4~{R},5~{R},6~{R})-4-[4-[4-bromanyl-2,3-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]-4-[5-chloranyl-2-(trifluoromethyl)phenyl]-2-methyl-1,2,4-triazole-3-thione, Galectin-3, MAGNESIUM ION
Authors:Amit, K, Swetha, R, Ghosh, K.
Deposit date:2024-04-12
Release date:2025-03-05
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Atropisomerism Observed in Galactose-Based Monosaccharide Inhibitors of Galectin-3 Comprising 2-Methyl-4-phenyl-2,4-dihydro-3 H -1,2,4-triazole-3-thione.
J.Med.Chem., 67, 2024
8ZUV
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BU of 8zuv by Molmil
Crystal structure of mouse Galectin-3 in complex with small molecule inhibitor
Descriptor: 5-[(2~{S},3~{R},4~{R},5~{R},6~{R})-4-[4-[4-bromanyl-2,3-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]-4-[5-chloranyl-2-(trifluoromethyl)phenyl]-2-methyl-1,2,4-triazole-3-thione, CHLORIDE ION, Galectin-3
Authors:Amit, K, Swetha, R, Ghosh, K.
Deposit date:2024-06-10
Release date:2025-03-05
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Atropisomerism Observed in Galactose-Based Monosaccharide Inhibitors of Galectin-3 Comprising 2-Methyl-4-phenyl-2,4-dihydro-3 H -1,2,4-triazole-3-thione.
J.Med.Chem., 67, 2024
8IU1
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BU of 8iu1 by Molmil
Crystal structure of mouse Galectin-3 in complex with small molecule inhibitor
Descriptor: 2-[(2R,3R,4S,5R,6R)-2-(3,4-dichlorophenyl)sulfanyl-6-(hydroxymethyl)-5-oxidanyl-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxan-3-yl]oxyethanoic acid, Galectin-3, MAGNESIUM ION
Authors:Jinal, S, Amit, K, Ghosh, K.
Deposit date:2023-03-23
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Discovery and Exploration of Monosaccharide Linked Dimers to Target Fibrosis
To Be Published
8ITZ
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BU of 8itz by Molmil
Crystal structure of human Galectin-3 in complex with small molecule inhibitor
Descriptor: 2-[(2R,3R,4S,5R,6R)-2-(3,4-dichlorophenyl)sulfanyl-6-(hydroxymethyl)-5-oxidanyl-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxan-3-yl]oxyethanoic acid, CHLORIDE ION, Galectin-3, ...
Authors:Jinal, S, Amit, K, Ghosh, K.
Deposit date:2023-03-23
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Discovery and Exploration of Monosaccharide Linked Dimers to Target Fibrosis
To Be Published
8ITX
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BU of 8itx by Molmil
Crystal structure of human Galectin-3 in complex with small molecule inhibitor
Descriptor: 2-[(2S,3R,4S,5R,6R)-2-[2-[2,5-bis(chloranyl)phenyl]-5-methyl-1,2,4-triazol-3-yl]-4-[4-[4-chloranyl-3,5-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-6-(hydroxymethyl)-5-oxidanyl-oxan-3-yl]oxyethanoic acid, CHLORIDE ION, Galectin-3, ...
Authors:Jinal, S, Ghosh, K.
Deposit date:2023-03-23
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Discovery and Exploration of Monosaccharide Linked Dimers to Target Fibrosis
To Be Published
7XFA
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BU of 7xfa by Molmil
Structure of human Galectin-3 CRD in complex with monosaccharide inhibitor
Descriptor: (2~{S},3~{R},4~{R},5~{R},6~{R})-4-[4-[4-chloranyl-3,5-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-[2-[5-chloranyl-2-(trifluoromethyl)phenyl]-5-methyl-1,2,4-triazol-3-yl]-6-(hydroxymethyl)oxane-3,5-diol, Galectin-3
Authors:Shukla, J, Raman, S, Ghosh, K.
Deposit date:2022-04-01
Release date:2022-10-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Identification of Monosaccharide Derivatives as Potent, Selective, and Orally Bioavailable Inhibitors of Human and Mouse Galectin-3.
J.Med.Chem., 65, 2022
8ILU
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BU of 8ilu by Molmil
Crystal structure of mouse Galectin-3 in complex with small molecule inhibitor
Descriptor: (2R,3R,4R,5R,6S)-2-(hydroxymethyl)-6-[2-(2-methyl-1,3-benzothiazol-6-yl)-1,2,4-triazol-3-yl]-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxane-3,5-diol, Galectin-3, SODIUM ION, ...
Authors:Kumar, A, Jinal, S, Raman, S, Ghosh, K.
Deposit date:2023-03-04
Release date:2024-03-06
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of benzothiazole derived monosaccharides as potent, selective, and orally bioavailable inhibitors of human and mouse galectin-3; a rare example of using a S···O binding interaction for drug design.
Bioorg.Med.Chem., 101, 2024
3MGV
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BU of 3mgv by Molmil
Cre recombinase-DNA transition state
Descriptor: DNA (5'-D(*CP*AP*TP*AP*TP*GP*CP*TP*AP*TP*AP*CP*GP*AP*AP*GP*TP*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*CP*TP*TP*CP*GP*TP*AP*TP*AP*G)-3'), Recombinase cre, ...
Authors:Gibb, B.P, Gupta, K, Ghosh, K, Sharp, R, Chen, J, Van Duyne, G.D.
Deposit date:2010-04-07
Release date:2010-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Requirements for catalysis in the Cre recombinase active site.
Nucleic Acids Res., 38, 2010
8SCE
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BU of 8sce by Molmil
Crystal structure of IRAK4-HSA complexed with N-[(2R)-2-FLUORO-3-HYDROXY-3-METHYLBUTYL]-6-[(5-FLUOROPYRI-YL)AMINO]-4-[(PROPAN-2-YL)AMINO]PYRIDINE-3-CARBOXAMIDE
Descriptor: Interleukin-1 receptor-associated kinase 4, N-[(2R)-2-fluoro-3-hydroxy-3-methylbutyl]-6-[(5-fluoropyrimidin-4-yl)amino]-4-[(propan-2-yl)amino]pyridine-3-carboxamide, SULFATE ION
Authors:Muckelbauer, J.K, Ghosh, K.
Deposit date:2023-04-05
Release date:2025-02-12
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:The Discovery of IRAK4 Inhibitor Clinical Candidates BMS-986126 and BMS-986147 for the Treatment of Autoimmune Diseases
To Be Published

 

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