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PDB: 40736 件

7MPB
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SARS Coronavirus-2 Main Protease 3CL-pro binding Ascorbate
分子名称: 3C-like proteinase, ASCORBIC ACID, TRIFLUOROETHANOL
著者Pandey, S, Malla, T.N, Stojkovic, E.A, Schmidt, M.
登録日2021-05-04
公開日2021-05-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Vitamin C inhibits SARS coronavirus-2 main protease essential for viral replication
Biorxiv, 2021
7M2X
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Open conformation of the Yeast wild-type gamma-TuRC
分子名称: GUANOSINE-5'-DIPHOSPHATE, Spindle pole body component 110, Spindle pole body component SPC97, ...
著者Brilot, A.F, Lyon, A.S, Zelter, A, Viswanath, S, Maxwell, A, MacCoss, M.J, Muller, E.G, Sali, A, Davis, T.N, Agard, D.A.
登録日2021-03-17
公開日2021-05-12
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献CM1-driven assembly and activation of yeast gamma-tubulin small complex underlies microtubule nucleation.
Elife, 10, 2021
2PW2
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BU of 2pw2 by Molmil
Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide ELDKWKSL
分子名称: 2F5 Fab' heavy chain, 2F5 Fab' light chain, peptide epitope
著者Bryson, S, Julien, J.-P, Hynes, R.C, Pai, E.F.
登録日2007-05-10
公開日2007-05-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystallographic definition of the epitope promiscuity of the broadly neutralizing anti-human immunodeficiency virus type 1 antibody 2F5: vaccine design implications.
J.Virol., 83, 2009
4NDR
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BU of 4ndr by Molmil
Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity
分子名称: (mu3-oxo)-tris(mu2-oxo)-nonakisoxo-trimolybdenum (VI), ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Poppe, J, Warkentin, E, Demmer, U, Ermler, U.
登録日2013-10-27
公開日2014-08-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural diversity of polyoxomolybdate clusters along the three-fold axis of the molybdenum storage protein.
J.Inorg.Biochem., 138, 2014
4NFR
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Human brain aspartoacylase mutant E285A complex with intermediate analog (N-phosphonomethyl-L-aspartate)
分子名称: Aspartoacylase, N-[HYDROXY(METHYL)PHOSPHORYL]-L-ASPARTIC ACID, ZINC ION
著者Wijayasinghe, Y.S, Pavlovsky, A.G, Viola, R.E.
登録日2013-10-31
公開日2014-07-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Aspartoacylase catalytic deficiency as the cause of canavan disease: a structural perspective.
Biochemistry, 53, 2014
5W07
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CRYSTAL STRUCTURE OF THE INHA FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH AN12855, EBSI 4333.
分子名称: (~{N}~{E})-~{N}-[[2-[[2-ethylsulfonyl-1,1-bis(oxidanyl)-3,4-dihydro-2,3,1$l^{4}-benzodiazaborinin-7-yl]oxy]-5-(trifluoromethyl)phenyl]methylidene]hydroxylamine, Enoyl-[acyl-carrier-protein] reductase [NADH]
著者Abendroth, J, Edwards, T.E, Lorimer, D.
登録日2017-05-30
公開日2018-06-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Discovery of a cofactor-independent inhibitor of Mycobacterium tuberculosis InhA
To Be Published
8RC7
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BU of 8rc7 by Molmil
The structure of membrane-active antibiotic cyclodecapeptide gramicidin S in complex with urea
分子名称: Gramicidin S, UREA
著者Dodson, E.J.
登録日2023-12-06
公開日2024-03-06
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献The crystal structure of a hydrated gramicidin S urea complex
Nature, 275, 1978
2Q6E
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BU of 2q6e by Molmil
Crystal structure of glucuronate isomerase from Bacillus halodurans complexed with Zn
分子名称: BH0493 protein, CHLORIDE ION, SODIUM ION, ...
著者Fedorov, A.A, Fedorov, E.V, Patskovsky, Y, Toro, R, Sauder, J.M, Burley, S.K, Rauschel, F.M, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-06-05
公開日2007-06-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of glucuronate isomerase from Bacillus halodurans complexed with Zn.
To be Published
6DGG
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BU of 6dgg by Molmil
Cronobacter turicensis RpfR quorum-sensing receptor PAS domain in complex with C12:0
分子名称: LAURIC ACID, RpfR
著者Waldron, E.J, Neiditch, M.B.
登録日2018-05-17
公開日2019-01-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.498 Å)
主引用文献Structural basis of DSF recognition by its receptor RpfR and its regulatory interaction with the DSF synthase RpfF.
PLoS Biol., 17, 2019
2PG7
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BU of 2pg7 by Molmil
Crystal Structure of Human Microsomal P450 2A6 N297Q/I300V
分子名称: Cytochrome P450 2A6, PROTOPORPHYRIN IX CONTAINING FE
著者Sansen, S, Hsu, M.H, Stout, C.D, Johnson, E.F.
登録日2007-04-06
公開日2007-07-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insight into the altered substrate specificity of human cytochrome P450 2A6 mutants.
Arch.Biochem.Biophys., 464, 2007
4NO3
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BU of 4no3 by Molmil
Crystal structure of AMPD2 phosphopeptide bound to HLA-A2
分子名称: 1,2-ETHANEDIOL, AMP deaminase 2, Beta-2-microglobulin, ...
著者Mohammed, F, Stones, D.H, Willcox, B.E.
登録日2013-11-19
公開日2014-12-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.703 Å)
主引用文献The antigenic identity of human class I MHC phosphopeptides is critically dependent upon phosphorylation status.
Oncotarget, 8, 2017
4NP4
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BU of 4np4 by Molmil
Clostridium difficile toxin B CROP domain in complex with FAB domains of neutralizing antibody bezlotoxumab
分子名称: Toxin B, bezlotoxumab heavy chain, bezlotoxumab light chain
著者Orth, P, Xiao, L, Hernandez, L.D, Reichert, P, Sheth, P, Beaumont, M, Murgolo, N, Ermakov, G, DiNunzio, E, Racine, F, Karczewski, J, Secore, S, Ingram, R.N, Mayhood, T, Strickland, C, Therien, A.G.
登録日2013-11-20
公開日2014-05-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Mechanism of Action and Epitopes of Clostridium difficile Toxin B-neutralizing Antibody Bezlotoxumab Revealed by X-ray Crystallography.
J.Biol.Chem., 289, 2014
4NTD
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BU of 4ntd by Molmil
Crystal structure of HlmI
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE, ...
著者Scharf, D.H, Groll, M, Habel, A, Heinekamp, T, Hertweck, C, Brakhage, A.A, Huber, E.M.
登録日2013-12-02
公開日2014-03-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Flavoenzyme-Catalyzed Formation of Disulfide Bonds in Natural Products
Angew.Chem.Int.Ed.Engl., 53, 2014
4NTW
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BU of 4ntw by Molmil
Structure of acid-sensing ion channel in complex with snake toxin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acid-sensing ion channel 1, Basic phospholipase A2 homolog Tx-beta, ...
著者Baconguis, I, Bohlen, C.J, Goehring, A, Julius, D, Gouaux, E.
登録日2013-12-02
公開日2014-02-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献X-ray structure of Acid-sensing ion channel 1-snake toxin complex reveals open state of a na(+)-selective channel.
Cell(Cambridge,Mass.), 156, 2014
2PK8
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BU of 2pk8 by Molmil
Crystal structure of an uncharacterized protein PF0899 from Pyrococcus furiosus
分子名称: GOLD (I) CYANIDE ION, Uncharacterized protein PF0899
著者Liu, Z.J, Tempel, W, Chen, L, Shah, A, Lee, D, Clancy-Kelley, L.L, Dillard, B.D, Rose, J.P, Sugar, F.J, Jenny Jr, F.E, Lee, H.S, Izumi, M, Shah, C, Poole III, F.L, Adams, M.W.W, Richardson, J.S, Richardson, D.C, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2007-04-17
公開日2007-05-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of the hypothetical protein PF0899 from Pyrococcus furiosus at 1.85 A resolution.
Acta Crystallogr.,Sect.F, 63, 2007
6TTL
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BU of 6ttl by Molmil
crystal structure of [FeFe]-hydrogenase CbA5H (partial) from Clostridium beijerinckii in Hinact state
分子名称: IRON/SULFUR CLUSTER, [FeFe]-hydrogenase, dicarbonyl[bis(cyanide-kappaC)]-mu-(iminodimethanethiolatato-1kappaS:2kappaS)-mu-(oxomethylidene)diiron(2+)
著者Duan, J, Rutz, A, Hofmann, E, Happe, T.
登録日2019-12-28
公開日2020-12-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A safety cap protects hydrogenase from oxygen attack.
Nat Commun, 12, 2021
5VRL
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BU of 5vrl by Molmil
CRYSTAL STRUCTURE OF THE INHA FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH AN12855, EBSI 4333.
分子名称: (~{N}~{E})-~{N}-[[2-[[2-ethylsulfonyl-1,1-bis(oxidanyl)-3,4-dihydro-2,3,1$l^{4}-benzodiazaborinin-7-yl]oxy]-5-(trifluoromethyl)phenyl]methylidene]hydroxylamine, Enoyl-[acyl-carrier-protein] reductase [NADH]
著者Abendroth, J, Edwards, T.E, Lorimer, D.
登録日2017-05-11
公開日2018-05-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Discovery of a cofactor-independent inhibitor ofMycobacterium tuberculosisInhA.
Life Sci Alliance, 1, 2018
7MOA
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BU of 7moa by Molmil
Cryo-EM structure of the c-MET II/HGF I complex bound with HGF II in a rigid conformation
分子名称: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Hepatocyte growth factor, Hepatocyte growth factor receptor
著者Uchikawa, E, Chen, Z.M, Xiao, G.Y, Zhang, X.W, Bai, X.C.
登録日2021-05-01
公開日2021-06-09
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structural basis of the activation of c-MET receptor.
Nat Commun, 12, 2021
4NTY
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BU of 4nty by Molmil
Cesium sites in the crystal structure of acid-sensing ion channel in complex with snake toxin
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Acid-sensing ion channel 1, Basic phospholipase A2 homolog Tx-beta, ...
著者Baconguis, I, Bohlen, C.J, Goehring, A, Julius, D, Gouaux, E.
登録日2013-12-02
公開日2014-02-19
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献X-ray structure of Acid-sensing ion channel 1-snake toxin complex reveals open state of a na(+)-selective channel.
Cell(Cambridge,Mass.), 156, 2014
6TN8
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Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound BI-9564
分子名称: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, 4-[4-[(dimethylamino)methyl]-2,5-dimethoxy-phenyl]-2-methyl-2,7-naphthyridin-1-one, ...
著者Williams, E.P, Chen, Z, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.N.
登録日2019-12-06
公開日2019-12-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound BI-9564
To Be Published
4NWQ
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Computationally Designed Two-Component Self-Assembling Tetrahedral Cage, T33-21, Crystallized in Space Group F4132
分子名称: Putative uncharacterized protein PH0671, SULFATE ION, Uncharacterized protein
著者McNamara, D.E, King, N.P, Bale, J.B, Sheffler, W, Baker, D, Yeates, T.O.
登録日2013-12-06
公開日2014-05-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Accurate design of co-assembling multi-component protein nanomaterials.
Nature, 510, 2014
2PP3
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BU of 2pp3 by Molmil
Crystal structure of L-talarate/galactarate dehydratase mutant K197A liganded with Mg and L-glucarate
分子名称: L-GLUCARIC ACID, L-talarate/galactarate dehydratase, MAGNESIUM ION
著者Fedorov, A.A, Fedorov, E.V, Yew, W.S, Gerlt, J.A, Almo, S.C.
登録日2007-04-27
公開日2007-08-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Evolution of enzymatic activities in the enolase superfamily: L-talarate/galactarate dehydratase from Salmonella typhimurium LT2.
Biochemistry, 46, 2007
4ZGQ
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Structure of Cdc123 bound to eIF2-gammaDIII domain
分子名称: Cell division cycle protein 123, Eukaryotic translation initiation factor 2 subunit gamma
著者Panvert, M, Dubiez, E, Arnold, L, Perez, J, Seufert, W, Mechulam, Y, Schmitt, E.
登録日2015-04-23
公開日2015-10-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Cdc123, a Cell Cycle Regulator Needed for eIF2 Assembly, Is an ATP-Grasp Protein with Unique Features.
Structure, 23, 2015
7MG7
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BU of 7mg7 by Molmil
Concanavalin A bound to a DNA glycoconjugate, Man-GTAC
分子名称: 3-{[2-(2-hydroxyethoxy)ethyl]amino}-4-[(6-hydroxyhexyl)amino]cyclobut-3-ene-1,2-dione, CALCIUM ION, Concanavalin-A, ...
著者Partridge, B.E, Winegar, P.H, Mirkin, C.A.
登録日2021-04-12
公開日2021-06-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Redefining Protein Interfaces within Protein Single Crystals with DNA.
J.Am.Chem.Soc., 143, 2021
7MGD
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BU of 7mgd by Molmil
Concanavalin A bound to a DNA glycoconjugate, T(Man-T)TT
分子名称: CALCIUM ION, Concanavalin-A, MANGANESE (II) ION, ...
著者Partridge, B.E, Winegar, P.H, Mirkin, C.A.
登録日2021-04-12
公開日2021-06-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Redefining Protein Interfaces within Protein Single Crystals with DNA.
J.Am.Chem.Soc., 143, 2021

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件を2024-07-31に公開中

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