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PDB: 98 results

1PZS
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Crystal Structure of a Cu-Zn Superoxide Dismutase from Mycobacterium tuberculosis at 1.63 resolution
Descriptor: COPPER (II) ION, Superoxide dismutase [Cu-Zn]
Authors:Djinovic-Carugo, K, Spagnolo, L, Toro, I.
Deposit date:2003-07-14
Release date:2004-07-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Unique Features of the sodC-encoded Superoxide Dismutase from Mycobacterium tuberculosis, a Fully Functional Copper-containing Enzyme Lacking Zinc in the Active Site.
J.Biol.Chem., 279, 2004
1QUU
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BU of 1quu by Molmil
CRYSTAL STRUCTURE OF TWO CENTRAL SPECTRIN-LIKE REPEATS FROM ALPHA-ACTININ
Descriptor: HUMAN SKELETAL MUSCLE ALPHA-ACTININ 2
Authors:Djinovic-Carugo, K, Young, P, Gautel, M, Saraste, M.
Deposit date:1999-07-03
Release date:1999-08-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the alpha-actinin rod: molecular basis for cross-linking of actin filaments.
Cell(Cambridge,Mass.), 98, 1999
5JII
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BU of 5jii by Molmil
Crystal structure of human IgG1-Fc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ig gamma-1 chain C region, ...
Authors:Humm, A, Lobner, E, Mlynek, G, Obinger, C, Djinovic-Carugo, K.
Deposit date:2016-04-22
Release date:2017-04-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Fcab-HER2 Interaction: a Menage a Trois. Lessons from X-Ray and Solution Studies.
Structure, 25, 2017
1FWX
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CRYSTAL STRUCTURE OF NITROUS OXIDE REDUCTASE FROM P. DENITRIFICANS
Descriptor: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Brown, K, Djinovic-Carugo, K, Haltia, T, Cabrito, I, Saraste, M, Moura, J.J, Moura, I, Tegoni, M, Cambillau, C.
Deposit date:2000-09-25
Release date:2001-09-25
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Revisiting the Catalytic CuZ Cluster of Nitrous Oxide (N2O) Reductase. Evidence of a Bridging Inorganic Sulfur
J.Biol.Chem., 275, 2000
4TOI
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BU of 4toi by Molmil
Crystal structure of E.coli ribosomal protein S2 in complex with N-terminal domain of S1
Descriptor: 30S ribosomal protein S2,Ribosomal protein S1, ZINC ION
Authors:Grishkovskaya, I, Byrgazov, K, Moll, I, Djinovic-Carugo, K.
Deposit date:2014-06-05
Release date:2014-12-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the interaction of protein S1 with the Escherichia coli ribosome.
Nucleic Acids Res., 43, 2015
6IC9
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BU of 6ic9 by Molmil
Crystal structure of the SPOC domain of human PHF3 in complex with RNA polymerase II CTD diheptapeptide phosphorylated on Ser2Ser7
Descriptor: PHD finger protein 3, TYR-SEP-PRO-THR-SER-PRO-SEP-TYR-SEP-PRO-THR-SER-PRO
Authors:Grishkovskaya, I, Djinovic-Carugo, K, Slade, D.
Deposit date:2018-12-03
Release date:2020-07-15
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.748 Å)
Cite:PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Nat Commun, 12, 2021
4YDP
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BU of 4ydp by Molmil
Crystal structure of N-terminal PDZ domain of ZASP in complex with myotilin C-terminal peptide.
Descriptor: GLUTAMIC ACID, LEUCINE, LIM domain-binding protein 3
Authors:Grishkovskaya, I, Onipe, A, Kontaxis, G, Djinovic-Carugo, K.
Deposit date:2015-02-22
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of N-terminal PDZ domain of ZASP in complex with myotilin C-terminal peptide.
To Be Published
6IC8
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BU of 6ic8 by Molmil
Crystal structure of the SPOC domain of human PHF3 in complex with RNA polymerase II CTD diheptapeptide phosphorylated on Ser2
Descriptor: PHD finger protein 3, TYR-SEP-PRO-THR-SER-PRO-SER-TYR-SEP-PRO-THR
Authors:Grishkovskaya, I, Djinovic-Carugo, K, Slade, D.
Deposit date:2018-12-02
Release date:2020-07-15
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.929 Å)
Cite:PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Nat Commun, 12, 2021
6ERC
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BU of 6erc by Molmil
Peroxidase A from Dictyostelium discoideum (DdPoxA)
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Nicolussi, A, Mlynek, G, Furtmueller, P.G, Djinovic-Carugo, K, Obinger, C.
Deposit date:2017-10-17
Release date:2017-12-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.50001836 Å)
Cite:Secreted heme peroxidase from Dictyostelium discoideum: Insights into catalysis, structure, and biological role.
J. Biol. Chem., 293, 2018
6Q2V
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BU of 6q2v by Molmil
Crystal structure of SPOC domain of human PHD-finger protein 3 (PHF3)
Descriptor: GLYCEROL, PHD finger protein 3
Authors:Grishkovskaya, I, Slade, D, Djinovic-Carugo, K.
Deposit date:2018-12-03
Release date:2020-07-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.594 Å)
Cite:PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Nat Commun, 12, 2021
6Q5Y
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BU of 6q5y by Molmil
Crystal structure of the SPOC domain of human PHF3 in complex with RNA polymerase II CTD diheptapeptide phosphorylated on Ser2Ser5
Descriptor: PHD finger protein 3, pSer2pSer5
Authors:Grishkovskaya, I, Djinovic-Carugo, K, Slade, D.
Deposit date:2018-12-09
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Nat Commun, 12, 2021
4WWS
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BU of 4wws by Molmil
Structure of Chlorite dismutase-like Protein from Listeria monocytogenes
Descriptor: POTASSIUM ION, Putative heme-dependent peroxidase lmo2113
Authors:Hagmueller, A, Mlynek, G, Djinovic-Carugo, K.
Deposit date:2014-11-12
Release date:2015-02-04
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and heme-binding properties of HemQ (chlorite dismutase-like protein) from Listeria monocytogenes.
Arch.Biochem.Biophys., 574, 2015
7Z1K
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BU of 7z1k by Molmil
Crystal structure of the SPOC domain of human SHARP (SPEN) in complex with RNA polymerase II CTD heptapeptide phosphorylated on Ser5
Descriptor: Msx2-interacting protein, SER-TYR-SER-PRO-THR-SEP
Authors:Appel, L, Grishkovskaya, I, Slade, D, Djinovic-Carugo, K.
Deposit date:2022-02-24
Release date:2022-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The SPOC domain is a phosphoserine binding module that bridges transcription machinery with co- and post-transcriptional regulators.
Nat Commun, 14, 2023
7Z27
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BU of 7z27 by Molmil
Crystal structure of the SPOC domain of human RBM15
Descriptor: RNA-binding protein 15
Authors:Grishkovskaya, I, Appel, L.M, Djinovic-Carugo, K, Slade, D.
Deposit date:2022-02-25
Release date:2022-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The SPOC domain is a phosphoserine binding module that bridges transcription machinery with co- and post-transcriptional regulators.
Nat Commun, 14, 2023
1UO6
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BU of 1uo6 by Molmil
PORCINE PANCREATIC ELASTASE/Xe-COMPLEX
Descriptor: CHLORIDE ION, ELASTASE 1, GLYCEROL, ...
Authors:Mueller-Dieckmann, C, Polentarutti, M, Djinovic-Carugo, K, Panjikar, S, Tucker, P.A, Weiss, M.S.
Deposit date:2003-09-16
Release date:2003-10-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:On the Routine Use of Soft X-Rays in Macromolecular Crystallography. Part II. Data-Collection Wavelength and Scaling Models
Acta Crystallogr.,Sect.D, 60, 2004
6XUC
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BU of 6xuc by Molmil
Structure of coproheme decarboxylase from Corynebacterium diphteriae in complex with coproheme
Descriptor: 1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONIC ACID FERROUS COMPLEX, Chlorite dismutase
Authors:Michlits, H, Lier, B, Pfanzagl, V, Djinovic-Carugo, K, Furtmueller, P.G, Oostenbrink, C, Obinger, C, Hofbauer, S.
Deposit date:2020-01-17
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8702 Å)
Cite:Actinobacterial Coproheme Decarboxylases Use Histidine as a Distal Base to Promote Compound I Formation.
Acs Catalysis, 10, 2020
6XUB
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Structure of coproheme decarboxylase from Corynebacterium diphteriae in complex with monovinyl monopropionyl deuteroheme
Descriptor: Chlorite dismutase, harderoheme (III)
Authors:Michlits, H, Lier, B, Pfanzagl, V, Djinovic-Carugo, K, Furtmueller, P.G, Oostenbrink, C, Obinger, C, Hofbauer, S.
Deposit date:2020-01-17
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Actinobacterial Coproheme Decarboxylases Use Histidine as a Distal Base to Promote Compound I Formation.
Acs Catalysis, 10, 2020
4XQ3
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BU of 4xq3 by Molmil
Crystal structure of Sso-SmAP2
Descriptor: Like-Sm ribonucleoprotein core
Authors:Bezerra, G.A, Martens, B, Kreuter, M.J, Grishkovskaya, I, Manica, M, Arkhipova, V, Blasi, U, Djinovic-Carugo, K.
Deposit date:2015-01-18
Release date:2015-04-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Heptameric SmAP1 and SmAP2 Proteins of the Crenarchaeon Sulfolobus Solfataricus Bind to Common and Distinct RNA Targets.
Life, 5, 2015
4BNE
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BU of 4bne by Molmil
Pacsin2 Interacts with Membranes and Actin-Filaments
Descriptor: PROTEIN KINASE C AND CASEIN KINASE SUBSTRATE IN NEURONS PROTEIN 2, SULFATE ION, TRIETHYLENE GLYCOL
Authors:Kostan, J, Salzer, U, Orlova, A, Toeroe, I, Hodnik, V, Schreiner, C, Merilainen, J, Nikki, M, Virtanen, I, Lehto, V.-P, Anderluh, G, Egelman, E.H, Djinovic-Carugo, K.
Deposit date:2013-05-15
Release date:2014-05-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Direct Interaction of Actin Filaments with F-Bar Protein Pacsin2.
Embo Rep., 15, 2014
4D1E
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BU of 4d1e by Molmil
THE CRYSTAL STRUCTURE OF HUMAN MUSCLE ALPHA-ACTININ-2
Descriptor: ALPHA-ACTININ-2
Authors:Pinotsis, N, Salmazo, A, Sjoeblom, B, Gkougkoulia, E, Djinovic-Carugo, K.
Deposit date:2014-05-01
Release date:2014-12-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The Structure and Regulation of Human Muscle Alpha-Actinin
Cell(Cambridge,Mass.), 159, 2014
1BZO
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BU of 1bzo by Molmil
THREE-DIMENSIONAL STRUCTURE OF PROKARYOTIC CU,ZN SUPEROXIDE DISMUTASE FROM P.LEIOGNATHI, SOLVED BY X-RAY CRYSTALLOGRAPHY.
Descriptor: COPPER (II) ION, PROTEIN (SUPEROXIDE DISMUTASE), URANYL (VI) ION, ...
Authors:Bordo, D, Matak, D, Djinovic-Carugo, K, Rosano, C, Pesce, A, Bolognesi, M, Stroppolo, M.E, Falconi, M, Battistoni, A, Desideri, A.
Deposit date:1998-11-02
Release date:1999-04-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Evolutionary constraints for dimer formation in prokaryotic Cu,Zn superoxide dismutase.
J.Mol.Biol., 285, 1999
2VVB
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BU of 2vvb by Molmil
Human carbonic anhydrase II in complex with bicarbonate
Descriptor: BICARBONATE ION, CARBON DIOXIDE, CARBONIC ANHYDRASE 2, ...
Authors:Sjoeblom, B, Polentarutti, M, Djinovic-Carugo, K.
Deposit date:2008-06-04
Release date:2009-07-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural Study of X-Ray Induced Activation of Carbonic Anhydrase.
Proc.Natl.Acad.Sci.USA, 106, 2009
2VVA
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BU of 2vva by Molmil
Human carbonic anhydrase in complex with CO2
Descriptor: CARBON DIOXIDE, CARBONIC ANHYDRASE 2, GLYCEROL, ...
Authors:Sjoeblom, B, Polentarutti, M, Djinovic-Carugo, K.
Deposit date:2008-06-04
Release date:2009-07-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural Study of X-Ray Induced Activation of Carbonic Anhydrase.
Proc.Natl.Acad.Sci.USA, 106, 2009
6QBA
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BU of 6qba by Molmil
Crystal Structure of Retinol-Binding Protein 4 (RBP4) in complex with non-retinoid ligand A1120 and engineered binding scaffold
Descriptor: 2-[({4-[2-(trifluoromethyl)phenyl]piperidin-1-yl}carbonyl)amino]benzoic acid, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Mlynek, G, Brey, C.U, Djinovic-Carugo, K, Puehringer, D.
Deposit date:2018-12-20
Release date:2020-06-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A conformation-specific ON-switch for controlling CAR T cells with an orally available drug.
Proc.Natl.Acad.Sci.USA, 117, 2020
2N8Z
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BU of 2n8z by Molmil
Apo form of Calmodulin-Like Domain of Human Non-Muscle alpha-actinin 1
Descriptor: Alpha-actinin-1
Authors:Drmota Prebil, S, Slapsak, U, de Almeida Ribeiro, E, Pavsic, M, Ilc, G, Zielinska, K, Hartl, M, Backman, L, Plavec, J, Lenarcic, B, Djinovic-Carugo, K.
Deposit date:2015-10-28
Release date:2016-06-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and calcium-binding studies of calmodulin-like domain of human non-muscle alpha-actinin-1.
Sci Rep, 6, 2016

 

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