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PDB: 27 results

3SJZ
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BU of 3sjz by Molmil
The structure of aIF2gamma subunit delta 41-45 from archaeon Sulfolobus solfataricus complexed with GDP and GDPNP
Descriptor: BETA-MERCAPTOETHANOL, GUANOSINE-5'-DIPHOSPHATE, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Arkhipova, V.I, Lazopulo, S.M, Lazopulo, A.M, Nikonov, O.S, Stolboushkina, E.A, Gabdoulkhakov, A.G, Garber, M.B, Nikonov, S.V.
Deposit date:2011-06-22
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:HOLD FOR PUBLICATION
To be Published
7NGH
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BU of 7ngh by Molmil
Structure of glutamate transporter homologue in complex with Sybody
Descriptor: ASPARTIC ACID, Proton/glutamate symporter, SDF family, ...
Authors:Arkhipova, V, Slotboom, D.J, Guskov, A.
Deposit date:2021-02-09
Release date:2021-09-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Kinetic mechanism of Na + -coupled aspartate transport catalyzed by Glt Tk .
Commun Biol, 4, 2021
3PEN
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BU of 3pen by Molmil
Structure of archaeal initiation factor aIF2gamma subunit delta 37-47 from Sulfolobus solfataricus in the GDP-bound form.
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Arkhipova, V.I, Lazopulo, A.M, Lazopulo, S.M, Garber, M.B, Nikonov, O.S, Nikonov, S.V, Gabdoulkhakov, A.G.
Deposit date:2010-10-27
Release date:2011-05-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3005 Å)
Cite:Structure of archaeal initiation factor aIF2gamma subunit from Sulfolobus solfataricus in the GDP-bound form.
TO BE PUBLISHED
6R7R
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BU of 6r7r by Molmil
Crystal structure of the glutamate transporter homologue GltTk in complex with D-aspartate
Descriptor: D-ASPARTIC ACID, DECYL-BETA-D-MALTOPYRANOSIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Arkhipova, V, Guskov, A, Slotboom, D.J.
Deposit date:2019-03-29
Release date:2019-04-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Binding and transport of D-aspartate by the glutamate transporter homolog Glt Tk .
Elife, 8, 2019
6ZL4
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BU of 6zl4 by Molmil
the structure of glutamate transporter homologue GltTk in complex with the photo switchable compound (cis)
Descriptor: (2~{S},3~{S})-2-azanyl-3-[[4-[2-(4-methoxyphenyl)hydrazinyl]phenyl]methoxy]butanedioic acid, DECYL-BETA-D-MALTOPYRANOSIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Arkhipova, V, Slotboom, D.J, Guskov, A.
Deposit date:2020-06-30
Release date:2021-01-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Aspects of Photopharmacology: Insight into the Binding of Photoswitchable and Photocaged Inhibitors to the Glutamate Transporter Homologue.
J.Am.Chem.Soc., 143, 2021
6ZLH
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BU of 6zlh by Molmil
the structure of glutamate transporter homologue GltTk in complex with the photo switchable compound (trans)
Descriptor: (2~{S},3~{S})-2-azanyl-3-[[4-[2-(4-methoxyphenyl)hydrazinyl]phenyl]methoxy]butanedioic acid, DECYL-BETA-D-MALTOPYRANOSIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Arkhipova, V, Slotboom, D.J, Guskov, A.
Deposit date:2020-06-30
Release date:2021-01-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Aspects of Photopharmacology: Insight into the Binding of Photoswitchable and Photocaged Inhibitors to the Glutamate Transporter Homologue.
J.Am.Chem.Soc., 143, 2021
6XWO
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BU of 6xwo by Molmil
Structure of glutamate transporter homologue GltTk in the unsaturated conditions - inward-inward-outward configuration
Descriptor: ASPARTIC ACID, Proton/glutamate symporter, SDF family
Authors:Arkhipova, V, Slotboom, D.J, Guskov, A.
Deposit date:2020-01-24
Release date:2020-03-04
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
6XWN
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BU of 6xwn by Molmil
Structure of glutamate transporter homologue GltTk in the presence of TBOA inhibitor
Descriptor: (3S)-3-(BENZYLOXY)-L-ASPARTIC ACID, Proton/glutamate symporter, SDF family
Authors:Arkhipova, V, Slotboom, D.J, Guskov, A.
Deposit date:2020-01-24
Release date:2020-03-04
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
6XWR
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BU of 6xwr by Molmil
Structure of glutamate transporter homologue GltTk in sodium only condition
Descriptor: Proton/glutamate symporter, SDF family
Authors:Arkhipova, V, Slotboom, D.J, Guskov, A.
Deposit date:2020-01-24
Release date:2020-03-04
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
6XWQ
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BU of 6xwq by Molmil
Structure of glutamate transporter homologue GltTk in the saturated conditions
Descriptor: ASPARTIC ACID, Proton/glutamate symporter, SDF family
Authors:Arkhipova, V, Slotboom, D.J, Guskov, A.
Deposit date:2020-01-24
Release date:2020-03-04
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
6XWP
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BU of 6xwp by Molmil
Structure of glutamate transporter homologue GltTk in unsaturated conditions - outward-outward-inward configuration
Descriptor: ASPARTIC ACID, Proton/glutamate symporter, SDF family
Authors:Arkhipova, V, Slotboom, D.J, Guskov, A.
Deposit date:2020-01-24
Release date:2020-03-04
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
6ZGB
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BU of 6zgb by Molmil
glutamate transporter homologue Glttk in complex with a photo cage compound
Descriptor: (2~{S},3~{S})-2-azanyl-3-[(2-nitrophenyl)methoxy]butanedioic acid, DI(HYDROXYETHYL)ETHER, Proton/glutamate symporter, ...
Authors:Arkhipova, V, Slotboom, D.J, Guskov, A.
Deposit date:2020-06-18
Release date:2021-01-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Aspects of Photopharmacology: Insight into the Binding of Photoswitchable and Photocaged Inhibitors to the Glutamate Transporter Homologue.
J.Am.Chem.Soc., 143, 2021
4XQ3
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BU of 4xq3 by Molmil
Crystal structure of Sso-SmAP2
Descriptor: Like-Sm ribonucleoprotein core
Authors:Bezerra, G.A, Martens, B, Kreuter, M.J, Grishkovskaya, I, Manica, M, Arkhipova, V, Blasi, U, Djinovic-Carugo, K.
Deposit date:2015-01-18
Release date:2015-04-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Heptameric SmAP1 and SmAP2 Proteins of the Crenarchaeon Sulfolobus Solfataricus Bind to Common and Distinct RNA Targets.
Life, 5, 2015
4M0L
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BU of 4m0l by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus complexed with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Nikonov, O.S, Stolboushkina, E.A, Arkhipova, V.I, Gabdulkhakov, A.G, Nikulin, A.D, Lazopulo, A.M, Lazopulo, S.M, Garber, M.B, Nikonov, S.V.
Deposit date:2013-08-01
Release date:2013-08-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2.
Acta Crystallogr.,Sect.D, 70, 2014
4M2L
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BU of 4m2l by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in nucleotide-free form
Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, SULFATE ION, ...
Authors:Nikonov, O.S, Stolboushkina, E.A, Arkhipova, V.I, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
Deposit date:2013-08-05
Release date:2014-03-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.149 Å)
Cite:Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2.
Acta Crystallogr.,Sect.D, 70, 2014
4M53
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BU of 4m53 by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in complex with GDPCP
Descriptor: BETA-MERCAPTOETHANOL, FORMIC ACID, MAGNESIUM ION, ...
Authors:Nikonov, O.S, Stolboushkina, E.A, Arkhipova, V.I, Lazopulo, A.M, Lazopulo, S.M, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
Deposit date:2013-08-07
Release date:2013-08-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2.
Acta Crystallogr.,Sect.D, 70, 2014
4M4S
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BU of 4m4s by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in complex with GDP and formate ion mimic aIF2gamma*GDP*Pi complex (a formate ion substitutes for Pi)
Descriptor: FORMIC ACID, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Nikonov, O.S, Stolboushkina, E.A, Arkhipova, V.I, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
Deposit date:2013-08-07
Release date:2014-03-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2.
Acta Crystallogr.,Sect.D, 70, 2014
7ZUP
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BU of 7zup by Molmil
Human PRMT5:MEP50 structure with Fragment (Example 18) and MTA Bound
Descriptor: 3-ethylimidazo[4,5-b]pyridin-2-amine, 5'-DEOXY-5'-METHYLTHIOADENOSINE, GLYCEROL, ...
Authors:Ahmad, M.U, Koelmel, W, Arkhipova, V, Lawson, J.D, Smith, C.R, Gunn, R.J.
Deposit date:2022-05-12
Release date:2022-10-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Fragment optimization and elaboration strategies - the discovery of two lead series of PRMT5/MTA inhibitors from five fragment hits.
Rsc Med Chem, 13, 2022
7ZVU
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BU of 7zvu by Molmil
HUMAN PRMT5:MEP50 Crystal Structure With MTA and Fragment Bound
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, GLYCEROL, Methylosome protein 50, ...
Authors:Ahmad, M.U, Koelmel, W, Arkhipova, V, Lawson, J.D, Smith, C.R, Gunn, R.J.
Deposit date:2022-05-17
Release date:2022-10-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Fragment optimization and elaboration strategies - the discovery of two lead series of PRMT5/MTA inhibitors from five fragment hits.
Rsc Med Chem, 13, 2022
7ZUU
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BU of 7zuu by Molmil
HUMAN PRMT5:MEP50 Crystal Structure With MTA and Fragment Bound
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, GLYCEROL, Methylosome protein 50, ...
Authors:Ahmad, M.U, Koelmel, W, Arkhipova, V, Lawson, J.D, Smith, C.R, Gunn, R.J.
Deposit date:2022-05-13
Release date:2022-10-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Fragment optimization and elaboration strategies - the discovery of two lead series of PRMT5/MTA inhibitors from five fragment hits.
Rsc Med Chem, 13, 2022
7ZV2
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BU of 7zv2 by Molmil
HUMAN PRMT5:MEP50 Crystal Structure With MTA and Fragment Bound
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, GLYCEROL, Methylosome protein 50, ...
Authors:Ahmad, M.U, Koelmel, W, Arkhipova, V, Lawson, J.D, Smith, C.R, Gunn, R.J.
Deposit date:2022-05-13
Release date:2022-10-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Fragment optimization and elaboration strategies - the discovery of two lead series of PRMT5/MTA inhibitors from five fragment hits.
Rsc Med Chem, 13, 2022
7ZUQ
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BU of 7zuq by Molmil
HUMAN PRMT5:MEP50 Crystal Structure With MTA and Fragment Bound
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, GLYCEROL, Methylosome protein 50, ...
Authors:Ahmad, M.U, Koelmel, W, Arkhipova, V, Lawson, J.D, Smith, C.R, Gunn, R.J.
Deposit date:2022-05-13
Release date:2022-10-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Fragment optimization and elaboration strategies - the discovery of two lead series of PRMT5/MTA inhibitors from five fragment hits.
Rsc Med Chem, 13, 2022
7ZUY
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BU of 7zuy by Molmil
HUMAN PRMT5:MEP50 Crystal Structure With MTA and Fragment Bound
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, GLYCEROL, Methylosome protein 50, ...
Authors:Ahmad, M.U, Koelmel, W, Arkhipova, V, Lawson, J.D, Smith, C.R, Gunn, R.J.
Deposit date:2022-05-13
Release date:2022-10-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fragment optimization and elaboration strategies - the discovery of two lead series of PRMT5/MTA inhibitors from five fragment hits.
Rsc Med Chem, 13, 2022
7ZVL
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BU of 7zvl by Molmil
HUMAN PRMT5:MEP50 Crystal Structure With MTA and Fragment Bound
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, CHLORIDE ION, GLYCEROL, ...
Authors:Ahmad, M.U, Koelmel, W, Arkhipova, V, Lawson, J.D, Smith, C.R, Gunn, R.J.
Deposit date:2022-05-16
Release date:2022-10-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Fragment optimization and elaboration strategies - the discovery of two lead series of PRMT5/MTA inhibitors from five fragment hits.
Rsc Med Chem, 13, 2022
6I5M
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BU of 6i5m by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in complex with GDP and formate ion
Descriptor: FORMIC ACID, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Kravchenko, O, Nikonov, O, Gabdulkhakov, A, Stolboushkina, E, Arkhipova, V, Garber, M, Nikonov, S.
Deposit date:2018-11-13
Release date:2019-01-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The third structural switch in the archaeal translation initiation factor 2 (aIF2) molecule and its possible role in the initiation of GTP hydrolysis and the removal of aIF2 from the ribosome.
Acta Crystallogr D Struct Biol, 75, 2019

 

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