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PDB: 1000 results

2DXL
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BU of 2dxl by Molmil
Glycerophosphodiesterase from Enterobacter aerogenes
Descriptor: COBALT (II) ION, Phosphohydrolase
Authors:Jackson, C.J, Carr, P.D, Ollis, D.L.
Deposit date:2006-08-28
Release date:2007-05-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure and function of a novel glycerophosphodiesterase from Enterobacter aerogenes
J.Mol.Biol., 367, 2007
2DXN
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BU of 2dxn by Molmil
Glycerophosphodiesterase from Enterobacter aerogenes
Descriptor: Phosphohydrolase, ZINC ION
Authors:Jackson, C.J, Carr, P.D, Ollis, D.L.
Deposit date:2006-08-28
Release date:2007-05-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:The structure and function of a novel glycerophosphodiesterase from Enterobacter aerogenes
J.Mol.Biol., 367, 2007
5SV9
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BU of 5sv9 by Molmil
Structure of the SLC4 transporter Bor1p in an inward-facing conformation
Descriptor: Bor1p boron transporter
Authors:Coudray, N, Seyler, S, Lasala, R, Zhang, Z, Clark, K.M, Dumont, M.E, Rohou, A, Beckstein, O, Stokes, D.L, Transcontinental EM Initiative for Membrane Protein Structure (TEMIMPS)
Deposit date:2016-08-05
Release date:2016-08-17
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Structure of the SLC4 transporter Bor1p in an inward-facing conformation.
Protein Sci., 26, 2017
2EIA
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BU of 2eia by Molmil
X-RAY CRYSTAL STRUCTURE OF EQUINE INFECTIOUS ANEMIA VIRUS (EIAV) CAPSID PROTEIN P26
Descriptor: EIAV CAPSID PROTEIN P26
Authors:Jin, Z, Jin, L, Peterson, D.L, Lawson, C.L.
Deposit date:1998-07-15
Release date:1998-12-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Model for lentivirus capsid core assembly based on crystal dimers of EIAV p26.
J.Mol.Biol., 286, 1999
5TBW
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BU of 5tbw by Molmil
Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Konst, Z.A, Szklarski, A.R, Pellegrino, S, Michalak, S.E, Meyer, M, Zanette, C, Cencic, R, Nam, S, Horne, D.A, Pelletier, J, Mobley, D.L, Yusupova, G, Yusupov, M, Vanderwal, C.D.
Deposit date:2016-09-13
Release date:2017-07-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:Synthesis facilitates an understanding of the structural basis for translation inhibition by the lissoclimides.
Nat Chem, 9, 2017
1DSX
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BU of 1dsx by Molmil
KV1.2 T1 DOMAIN, RESIDUES 33-119, T46V MUTANT
Descriptor: PROTEIN (KV1.2 VOLTAGE-GATED POTASSIUM CHANNEL)
Authors:Minor Jr, D.L, Lin, Y.-F, Mobley, B.C, Avelar, A, Jan, Y.N, Jan, L.Y, Berger, J.M.
Deposit date:2000-01-10
Release date:2000-09-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The polar T1 interface is linked to conformational changes that open the voltage-gated potassium channel.
Cell(Cambridge,Mass.), 102, 2000
5V2Q
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BU of 5v2q by Molmil
CaV beta2a subunit: CaV1.2 AID-CEN complex
Descriptor: 1,3-bis(bromomethyl)benzene, CHLORIDE ION, Voltage-dependent L-type calcium channel subunit alpha-1C, ...
Authors:Findeisen, F, Campiglio, M, Jo, H, Rumpf, C.H, Pope, L, Flucher, B, Degrado, W.F, Minor, D.L.
Deposit date:2017-03-06
Release date:2017-07-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Stapled Voltage-Gated Calcium Channel (CaV) alpha-Interaction Domain (AID) Peptides Act As Selective Protein-Protein Interaction Inhibitors of CaV Function.
ACS Chem Neurosci, 8, 2017
5UQI
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BU of 5uqi by Molmil
E. coli CFT073 c3406 in complex with A5P
Descriptor: ARABINOSE-5-PHOSPHATE, Phosphosugar isomerase
Authors:Cech, D.L, Pratt, A.C, Woodard, R.W.
Deposit date:2017-02-08
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Insights into the mechanism of arabinose-5-phosphate isomerases.
To Be Published
5V2P
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BU of 5v2p by Molmil
CaV beta2a subunit: CaV1.2 AID-CAP complex
Descriptor: 1,3-bis(bromomethyl)benzene, NICKEL (II) ION, PENTAETHYLENE GLYCOL, ...
Authors:Findeisen, F, Campiglio, M, Jo, H, Rumpf, C.H, Pope, L, Flucher, B, Degrado, W.F, Minor, D.L.
Deposit date:2017-03-06
Release date:2017-07-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Stapled Voltage-Gated Calcium Channel (CaV) alpha-Interaction Domain (AID) Peptides Act As Selective Protein-Protein Interaction Inhibitors of CaV Function.
ACS Chem Neurosci, 8, 2017
2GUI
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BU of 2gui by Molmil
Structure and Function of Cyclized Versions of the Proofreading Exonuclease Subunit of E. coli DNA Polymerase III
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA polymerase III epsilon subunit, ...
Authors:Park, A.Y, Carr, P.D, Ollis, D.L, Dixon, N.E.
Deposit date:2006-04-30
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and Function of Cyclized Versions of the Proofreading Exonuclease Subunit E. coli DNA Polymerase III
To be Published
7QPA
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BU of 7qpa by Molmil
Outward-facing auxin bound form of auxin transporter PIN8
Descriptor: 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1H-INDOL-3-YLACETIC ACID, Auxin efflux carrier component 8
Authors:Ung, K.L, Winkler, M.B.L, Dedic, E, Stokes, D.L, Pedersen, B.P.
Deposit date:2022-01-03
Release date:2022-07-06
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Structures and mechanism of the plant PIN-FORMED auxin transporter.
Nature, 609, 2022
7QP9
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BU of 7qp9 by Molmil
Outward-facing apo-form of auxin transporter PIN8
Descriptor: 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Auxin efflux carrier component 8
Authors:Ung, K.L, Winkler, M.B.L, Dedic, E, Stokes, D.L, Pedersen, B.P.
Deposit date:2022-01-03
Release date:2022-07-06
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Structures and mechanism of the plant PIN-FORMED auxin transporter.
Nature, 609, 2022
6ZLP
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BU of 6zlp by Molmil
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 4-Aminopiazthiole
Descriptor: 2,1,3-benzothiadiazol-4-amine, CALCIUM ION, DIMETHYL SULFOXIDE, ...
Authors:Fata, F, Silvestri, I, Williams, D.L, Angelucci, F.
Deposit date:2020-06-30
Release date:2021-05-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Probing the Surface of a Parasite Drug Target Thioredoxin Glutathione Reductase Using Small Molecule Fragments.
Acs Infect Dis., 7, 2021
7QPC
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BU of 7qpc by Molmil
Inward-facing NPA bound form of auxin transporter PIN8
Descriptor: 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-(naphthalen-1-ylcarbamoyl)benzoic acid, Auxin efflux carrier component 8
Authors:Ung, K.L, Winkler, M.B.L, Dedic, E, Stokes, D.L, Pedersen, B.P.
Deposit date:2022-01-03
Release date:2022-07-06
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Structures and mechanism of the plant PIN-FORMED auxin transporter.
Nature, 609, 2022
6ZLB
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BU of 6zlb by Molmil
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with Indole-3-carbinol
Descriptor: 1~{H}-indol-3-ylmethanol, DIMETHYL SULFOXIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Fata, F, Silvestri, I, Williams, D.L, Angelucci, F.
Deposit date:2020-06-30
Release date:2021-05-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Probing the Surface of a Parasite Drug Target Thioredoxin Glutathione Reductase Using Small Molecule Fragments.
Acs Infect Dis., 7, 2021
6ZST
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BU of 6zst by Molmil
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 3-(3-methoxyquinoxalin-2-yl)propanoic acid
Descriptor: 3-(3-methoxyquinoxalin-2-yl)propanoic acid, DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Fata, F, Silvestri, I, Williams, D.L, Angelucci, F.
Deposit date:2020-07-16
Release date:2021-05-19
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Probing the Surface of a Parasite Drug Target Thioredoxin Glutathione Reductase Using Small Molecule Fragments.
Acs Infect Dis., 7, 2021
6ZP3
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BU of 6zp3 by Molmil
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 2-Methylindole-3-acetic acid
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(2-methyl-1~{H}-indol-3-yl)ethanoic acid, CALCIUM ION, ...
Authors:Fata, F, Silvestri, I, Williams, D.L, Angelucci, F.
Deposit date:2020-07-08
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Probing the Surface of a Parasite Drug Target Thioredoxin Glutathione Reductase Using Small Molecule Fragments.
Acs Infect Dis., 7, 2021
7R40
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BU of 7r40 by Molmil
Structure of the SARS-CoV-2 spike glycoprotein in complex with the 87G7 antibody Fab fragment
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 87G7 heavy chain variable region, ...
Authors:Hurdiss, D.L.
Deposit date:2022-02-08
Release date:2022-04-20
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:An ACE2-blocking antibody confers broad neutralization and protection against Omicron and other SARS-CoV-2 variants of concern.
Sci Immunol, 7, 2022
7RGK
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BU of 7rgk by Molmil
DfrA5 complexed with NADPH and 5-(3-(7-(4-(aminomethyl)phenyl)benzo[d][1,3]dioxol-5-yl)but-1-yn-1-yl)-6-ethylpyrimidine-2,4-diamine (UCP1223)
Descriptor: 5-[(3R)-3-{7-[4-(aminomethyl)phenyl]-2H-1,3-benzodioxol-5-yl}but-1-yn-1-yl]-6-ethylpyrimidine-2,4-diamine, Dihydrofolate reductase type 5, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Lombardo, M.N, Wright, D.L.
Deposit date:2021-07-15
Release date:2022-05-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structure-guided functional studies of plasmid-encoded dihydrofolate reductases reveal a common mechanism of trimethoprim resistance in Gram-negative pathogens.
Commun Biol, 5, 2022
7RGO
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BU of 7rgo by Molmil
DfrA5 complexed with NADPH and 4'-chloro-3'-(4-(2,4-diamino-6-ethylpyrimidin-5-yl)but-3-yn-2-yl)-[1,1'-biphenyl]-4-carboxamide (UCP1228)
Descriptor: 4'-chloro-3'-[(2S)-4-(2,4-diamino-6-ethylpyrimidin-5-yl)but-3-yn-2-yl][1,1'-biphenyl]-4-carboxamide, Dihydrofolate reductase type 5, GLYCEROL, ...
Authors:Lombardo, M.N, Wright, D.L.
Deposit date:2021-07-15
Release date:2022-05-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structure-guided functional studies of plasmid-encoded dihydrofolate reductases reveal a common mechanism of trimethoprim resistance in Gram-negative pathogens.
Commun Biol, 5, 2022
7RGJ
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BU of 7rgj by Molmil
DfrA1 complexed with NADPH and 5-(3-(7-(4-(aminomethyl)phenyl)benzo[d][1,3]dioxol-5-yl)but-1-yn-1-yl)-6-ethylpyrimidine-2,4-diamine (UCP1223)
Descriptor: 5-[(3R)-3-{7-[4-(aminomethyl)phenyl]-2H-1,3-benzodioxol-5-yl}but-1-yn-1-yl]-6-ethylpyrimidine-2,4-diamine, 5-[(3S)-3-{7-[4-(aminomethyl)phenyl]-2H-1,3-benzodioxol-5-yl}but-1-yn-1-yl]-6-ethylpyrimidine-2,4-diamine, CALCIUM ION, ...
Authors:Lombardo, M.N, Wright, D.L.
Deposit date:2021-07-15
Release date:2022-05-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structure-guided functional studies of plasmid-encoded dihydrofolate reductases reveal a common mechanism of trimethoprim resistance in Gram-negative pathogens.
Commun Biol, 5, 2022
7REB
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BU of 7reb by Molmil
E. coli dihydrofolate reductase complexed with 5-(3-(7-(4-(aminomethyl)phenyl)benzo[d][1,3]dioxol-5-yl)but-1-yn-1-yl)-6-ethylpyrimidine-2,4-diamine (UCP1223)
Descriptor: 5-[(3R)-3-{7-[4-(aminomethyl)phenyl]-2H-1,3-benzodioxol-5-yl}but-1-yn-1-yl]-6-ethylpyrimidine-2,4-diamine, Dihydrofolate reductase, SULFATE ION
Authors:Lombardo, M.N, Wright, D.L.
Deposit date:2021-07-12
Release date:2022-07-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structure-guided functional studies of plasmid-encoded dihydrofolate reductases reveal a common mechanism of trimethoprim resistance in Gram-negative pathogens.
Commun Biol, 5, 2022
7REG
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BU of 7reg by Molmil
DfrA1 complexed with NADPH and 4'-chloro-3'-(4-(2,4-diamino-6-ethylpyrimidin-5-yl)but-3-yn-2-yl)-[1,1'-biphenyl]-4-carboxamide (UCP1228)
Descriptor: 4'-chloro-3'-[(2S)-4-(2,4-diamino-6-ethylpyrimidin-5-yl)but-3-yn-2-yl][1,1'-biphenyl]-4-carboxamide, CALCIUM ION, Dihydrofolate reductase type 1, ...
Authors:Lombardo, M.N, Wright, D.L.
Deposit date:2021-07-12
Release date:2022-07-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structure-guided functional studies of plasmid-encoded dihydrofolate reductases reveal a common mechanism of trimethoprim resistance in Gram-negative pathogens.
Commun Biol, 5, 2022
7B02
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BU of 7b02 by Molmil
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 4-Hydroxy-7-methyl-1,8-naphthyridine-3-carboxylic acid
Descriptor: 4-Hydroxy-7-methyl-1,8-naphthyridine-3-carboxylic acid, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Fata, F, Silvestri, I, Williams, D.L, Angelucci, F.
Deposit date:2020-11-18
Release date:2021-05-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Probing the Surface of a Parasite Drug Target Thioredoxin Glutathione Reductase Using Small Molecule Fragments.
Acs Infect Dis., 7, 2021
7AKD
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BU of 7akd by Molmil
Structure of the SARS-CoV-2 spike glycoprotein in complex with the 47D11 neutralizing antibody Fab fragment
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 47D11 neutralizing antibody heavy chain, ...
Authors:Fedry, J, Hurdiss, D.L, Wang, C, Li, W, Obal, G, Drulyte, I, Howes, S.C, van Kuppeveld, F.J.M, Foerster, F, Bosch, B.J.
Deposit date:2020-09-30
Release date:2021-05-19
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural insights into the cross-neutralization of SARS-CoV and SARS-CoV-2 by the human monoclonal antibody 47D11.
Sci Adv, 7, 2021

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