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PDB: 996 results

4TPL
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West Nile Virus Non-structural protein 1 (NS1) Form 1 crystal
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, OXTOXYNOL-10, ...
Authors:Akey, D.L, Smith, J.L.
Deposit date:2014-06-08
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Use of massively multiple merged data for low-resolution S-SAD phasing and refinement of flavivirus NS1.
Acta Crystallogr.,Sect.D, 70, 2014
8D00
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Structure of the Arabidopsis thaliana SPIRAL2 TOG domain
Descriptor: IODIDE ION, Microtubule-associated protein TORTIFOLIA1
Authors:Slep, K.C, Bolhuis, D.L.
Deposit date:2022-05-25
Release date:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A structurally divergent TOG domain stabilizes microtubule minus ends in Arabidopsis
Plant Cell, 2023
8E77
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rystal structure of Pcryo_0616, the aminotransferase required to synthesize UDP-N-acetyl-3-amino-D-glucosaminuronic acid (UDP-GlcNAc3NA), incomplete with its external aldimine reaction intermediate
Descriptor: (2S,3S,4R,5R,6R)-5-(acetylamino)-6-{[(R)-{[(S)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-3-hydroxy-4-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}tetrahydro-2H-pyran-2-carboxylic acid (non-preferred name), 1,2-ETHANEDIOL, DegT/DnrJ/EryC1/StrS aminotransferase, ...
Authors:Hofmeister, D.L, Seltzner, C.A, Bockhaus, N.J, Thoden, J.B, Holden, H.M.
Deposit date:2022-08-23
Release date:2022-11-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1 Å)
Cite:Investigation of the enzymes required for the biosynthesis of 2,3-diacetamido-2,3-dideoxy-d-glucuronic acid in Psychrobacter cryohalolentis K5 T.
Protein Sci., 32, 2023
8E75
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Crystal structure of Pcryo_0616, the aminotransferase required to synthesize UDP-N-acetyl-3-amino-D-glucosaminuronic acid (UDP-GlcNAc3NA)
Descriptor: 1,2-ETHANEDIOL, DegT/DnrJ/EryC1/StrS aminotransferase, SODIUM ION
Authors:Hofmeister, D.L, Seltzner, C.A, Bockhaus, N.J, thoden, J.B, Holden, H.M.
Deposit date:2022-08-23
Release date:2022-11-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Investigation of the enzymes required for the biosynthesis of 2,3-diacetamido-2,3-dideoxy-d-glucuronic acid in Psychrobacter cryohalolentis K5 T.
Protein Sci., 32, 2023
8E62
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STRUCTURE OF Pcryo_0615 from Psychrobacter cryohalolentis, an N-acetyltransferase required to produce Diacetamido-2,3-dideoxy-D-glucuronic acid
Descriptor: (2S,3S,4R,5R,6R)-5-(acetylamino)-4-amino-6-{[(R)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-3-hydroxytetrahydro-2H-pyran-2-carboxylic acid, COENZYME A, SODIUM ION, ...
Authors:Hofmeister, D.L, Bockhaus, N.J, Seltzner, C.A, Thoden, J.B, Holden, H.M.
Deposit date:2022-08-22
Release date:2022-11-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Investigation of the enzymes required for the biosynthesis of 2,3-diacetamido-2,3-dideoxy-d-glucuronic acid in Psychrobacter cryohalolentis K5 T.
Protein Sci., 32, 2023
6B8L
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Crystal Structure of the Apo/CaM:Kv7.4 (KCNQ4) AB Domain Complex
Descriptor: Calmodulin-1, Potassium voltage-gated channel subfamily KQT member 4, SULFATE ION
Authors:Chang, A, Abderemane-Ali, F, Minor, D.L.
Deposit date:2017-10-09
Release date:2018-03-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Calmodulin C-Lobe Ca2+-Dependent Switch Governs Kv7 Channel Function
Neuron, 97, 2018
6B8N
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Crystal Structure of the Ca2+/CaM:Kv7.4 (KCNQ4) AB Domain Complex, 10 uM CaCl2 soak
Descriptor: CALCIUM ION, Calmodulin-1, Potassium voltage-gated channel subfamily KQT member 4, ...
Authors:Chang, A, Minor, D.L.
Deposit date:2017-10-09
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:A Calmodulin C-Lobe Ca
Neuron, 97, 2018
6BA8
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YbtT - Type II thioesterase from Yersiniabactin NRPS/PKS biosynthetic pathway
Descriptor: Iron aquisition yersiniabactin synthesis enzyme, YbtT
Authors:Brett, T.J, Kober, D.L, Ohlemacher, S.I, Henderson, J.P.
Deposit date:2017-10-12
Release date:2018-10-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:YbtT is a low-specificity type II thioesterase that maintains production of the metallophore yersiniabactin in pathogenic enterobacteria.
J. Biol. Chem., 293, 2018
7XTY
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Crystal Structure of the second PDZ domain from human PTPN13 in complex with APC peptide
Descriptor: APC-peptide, Tyrosine-protein phosphatase non-receptor type 13
Authors:Jing, L.Q, Sun, X.N, Ma, W.H, Zhou, W.J, Wu, D.L.
Deposit date:2022-05-18
Release date:2023-05-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Targeting PTPN13 with 11 amino acid peptides of C-terminal APC prevents immune evasion of colorectal cancer
to be published
6AOD
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FXIa antibody complex
Descriptor: COBALT (II) ION, Coagulation factor XI, FXIa Antibody FAB Heavy Chain, ...
Authors:Lolicato, M, Minor, D.L.
Deposit date:2017-08-15
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for Activity and Specificity of an Anticoagulant Anti-FXIa Monoclonal Antibody and a Reversal Agent.
Structure, 26, 2018
8F6H
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BU of 8f6h by Molmil
Cryo-EM structure of a Zinc-loaded asymmetrical TMD D70A mutant of the YiiP-Fab complex
Descriptor: Cadmium and zinc efflux pump FieF, Fab2r heavy chain, Fab2r light chain, ...
Authors:Lopez-Redondo, M.L, Hussein, A.K, Stokes, D.L.
Deposit date:2022-11-16
Release date:2023-02-08
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Characterization of individual Zn2+ binding sites of YiiP
To Be Published
8F6E
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Cryo-EM structure of a Zinc-loaded wild-type YiiP-Fab complex
Descriptor: Cadmium and zinc efflux pump FieF, Fab heavy chain, Fab light chain, ...
Authors:Lopez-Redondo, M.L, Hussein, A.K, Stokes, D.L.
Deposit date:2022-11-16
Release date:2023-02-08
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Characterization of individual Zn2+ binding sites of YiiP
To Be Published
8F6K
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Cryo-EM structure of a Zinc-loaded H263A/D287A mutant of the YiiP-Fab complex
Descriptor: Cadmium and zinc efflux pump FieF, ZINC ION
Authors:Lopez-Redondo, M.L, Hussein, A.K, Stokes, D.L.
Deposit date:2022-11-16
Release date:2023-02-08
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Characterization of individual Zn2+ binding sites of YiiP
To Be Published
6BEV
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Human Single Domain Sulfurtranferase TSTD1
Descriptor: Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 1
Authors:Motl, N, Akey, D.L, Smith, J.L, Banerjee, R.
Deposit date:2017-10-25
Release date:2018-01-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.043 Å)
Cite:Thiosulfate sulfurtransferase-like domain-containing 1 protein interacts with thioredoxin.
J. Biol. Chem., 293, 2018
6B8Q
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Crystal Structure of the Mg2+/CaM:Kv7.5 (KCNQ5) AB domain complex
Descriptor: Calmodulin-1, MAGNESIUM ION, Potassium voltage-gated channel subfamily KQT member 5
Authors:Chang, A, Abderemane-Ali, F, Minor, D.L.
Deposit date:2017-10-09
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Calmodulin C-Lobe Ca
Neuron, 97, 2018
6B8P
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Crystal Structure of the Mg2+/CaM:Kv7.4 (KCNQ4) AB domain complex
Descriptor: Calmodulin-1, MAGNESIUM ION, Potassium voltage-gated channel subfamily KQT member 4, ...
Authors:Chang, A, Minor, D.L.
Deposit date:2017-10-09
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Calmodulin C-Lobe Ca
Neuron, 97, 2018
6BA9
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YbtT - Type II thioesterase from Yersiniabactin NRPS/PKS biosynthetic pathway- S89A mutant
Descriptor: Iron aquisition yersiniabactin synthesis enzyme, YbtT
Authors:Brett, T.J, Kober, D.L, Ohlemacher, S.I, Henderson, J.P.
Deposit date:2017-10-12
Release date:2018-10-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:YbtT is a low-specificity type II thioesterase that maintains production of the metallophore yersiniabactin in pathogenic enterobacteria.
J. Biol. Chem., 293, 2018
6B8M
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BU of 6b8m by Molmil
Crystal Structure of the Ca2+/CaM:Kv7.4 (KCNQ4) AB Domain Complex, 1 mM CaCl2 soak
Descriptor: CALCIUM ION, Calmodulin-1, Potassium voltage-gated channel subfamily KQT member 4, ...
Authors:Chang, A, Minor, D.L.
Deposit date:2017-10-09
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Calmodulin C-Lobe Ca
Neuron, 97, 2018
4EW1
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High resolution structure of human glycinamide ribonucleotide transformylase in apo form.
Descriptor: PHOSPHATE ION, SULFATE ION, Trifunctional purine biosynthetic protein adenosine-3
Authors:Connelly, S, DeMartino, K, Boger, D.L, Wilson, I.A.
Deposit date:2012-04-26
Release date:2013-07-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.522 Å)
Cite:Biological and Structural Evaluation of 10R- and 10S-Methylthio-DDACTHF Reveals a New Role for Sulfur in Inhibition of Glycinamide Ribonucleotide Transformylase.
Biochemistry, 52, 2013
4EW3
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BU of 4ew3 by Molmil
The structure of human glycinamide ribonucleotide transformylase in complex with 10R-methylthio-DDATHF.
Descriptor: N-({4-[(1R)-4-(2,4-diamino-6-oxo-1,6-dihydropyrimidin-5-yl)-1-(methylsulfanyl)butyl]phenyl}carbonyl)-L-glutamic acid, PHOSPHATE ION, SULFATE ION, ...
Authors:Connelly, S, DeMartino, K, Boger, D.L, Wilson, I.A.
Deposit date:2012-04-26
Release date:2013-07-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:Biological and Structural Evaluation of 10R- and 10S-Methylthio-DDACTHF Reveals a New Role for Sulfur in Inhibition of Glycinamide Ribonucleotide Transformylase.
Biochemistry, 52, 2013
8EOI
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BU of 8eoi by Molmil
Structure of a human EMC:human Cav1.2 channel complex in GDN detergent
Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chen, Z, Mondal, A, Abderemane-Ali, F, Minor, D.L.
Deposit date:2022-10-03
Release date:2023-05-24
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:EMC chaperone-Ca V structure reveals an ion channel assembly intermediate.
Nature, 619, 2023
8EOG
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Structure of the human L-type voltage-gated calcium channel Cav1.2 complexed with L-leucine
Descriptor: (2R)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(dodecanoyloxy)propyl dodecanoate, (2R)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(dodecanoyloxy)propyl heptadecanoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chen, Z, Mondal, A, Abderemane-Ali, F, Minor, D.L.
Deposit date:2022-10-03
Release date:2023-05-24
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:EMC chaperone-Ca V structure reveals an ion channel assembly intermediate.
Nature, 619, 2023
1A2I
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BU of 1a2i by Molmil
SOLUTION STRUCTURE OF DESULFOVIBRIO VULGARIS (HILDENBOROUGH) FERROCYTOCHROME C3, NMR, 20 STRUCTURES
Descriptor: CYTOCHROME C3, HEME C
Authors:Messias, A.C, Kastrau, D.H.K, Costa, H.S, Legall, J, Turner, D.L, Santos, H, Xavier, A.V.
Deposit date:1998-01-05
Release date:1998-07-08
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of Desulfovibrio vulgaris (Hildenborough) ferrocytochrome c3: structural basis for functional cooperativity.
J.Mol.Biol., 281, 1998
5C0W
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Structure of a 12-subunit nuclear exosome complex bound to single-stranded RNA substrates
Descriptor: Exosome complex component CSL4, Exosome complex component MTR3, Exosome complex component RRP4, ...
Authors:Makino, D.L, Conti, E.
Deposit date:2015-06-12
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (4.6 Å)
Cite:RNA degradation paths in a 12-subunit nuclear exosome complex.
Nature, 524, 2015
4F12
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Crystal structure of the extracellular domain of human GABA(B) receptor GBR2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid type B receptor subunit 2
Authors:Geng, Y, Xiong, D, Mosyak, L, Malito, D.L, Kniazeff, J, Chen, Y, Burmakina, S, Quick, M, Bush, M, Javitch, J.A, Pin, J.-P, Fan, Q.R.
Deposit date:2012-05-05
Release date:2012-06-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Structure and functional interaction of the extracellular domain of human GABA(B) receptor GBR2.
Nat.Neurosci., 15, 2012

223532

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