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PDB: 998 results

8E75
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Crystal structure of Pcryo_0616, the aminotransferase required to synthesize UDP-N-acetyl-3-amino-D-glucosaminuronic acid (UDP-GlcNAc3NA)
Descriptor: 1,2-ETHANEDIOL, DegT/DnrJ/EryC1/StrS aminotransferase, SODIUM ION
Authors:Hofmeister, D.L, Seltzner, C.A, Bockhaus, N.J, thoden, J.B, Holden, H.M.
Deposit date:2022-08-23
Release date:2022-11-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Investigation of the enzymes required for the biosynthesis of 2,3-diacetamido-2,3-dideoxy-d-glucuronic acid in Psychrobacter cryohalolentis K5 T.
Protein Sci., 32, 2023
8E62
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STRUCTURE OF Pcryo_0615 from Psychrobacter cryohalolentis, an N-acetyltransferase required to produce Diacetamido-2,3-dideoxy-D-glucuronic acid
Descriptor: (2S,3S,4R,5R,6R)-5-(acetylamino)-4-amino-6-{[(R)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-3-hydroxytetrahydro-2H-pyran-2-carboxylic acid, COENZYME A, SODIUM ION, ...
Authors:Hofmeister, D.L, Bockhaus, N.J, Seltzner, C.A, Thoden, J.B, Holden, H.M.
Deposit date:2022-08-22
Release date:2022-11-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Investigation of the enzymes required for the biosynthesis of 2,3-diacetamido-2,3-dideoxy-d-glucuronic acid in Psychrobacter cryohalolentis K5 T.
Protein Sci., 32, 2023
5K6K
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Zika virus non-structural protein 1 (NS1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, SULFATE ION, ...
Authors:Akey, D.L, Brown, W.C, Smith, J.L.
Deposit date:2016-05-24
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Extended surface for membrane association in Zika virus NS1 structure.
Nat.Struct.Mol.Biol., 23, 2016
5KN7
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BU of 5kn7 by Molmil
Lipid A secondary acyltransferase LpxM from Acinetobacter baumannii
Descriptor: DODECYL-BETA-D-MALTOSIDE, GLYCEROL, Lipid A biosynthesis lauroyl acyltransferase, ...
Authors:Dovala, D.L, Hu, Q, Metzger IV, L.E.
Deposit date:2016-06-27
Release date:2016-09-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structure-guided enzymology of the lipid A acyltransferase LpxM reveals a dual activity mechanism.
Proc.Natl.Acad.Sci.USA, 113, 2016
5KNK
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Lipid A secondary acyltransferase LpxM from Acinetobacter baumannii with catalytic residue substitution (E127A)
Descriptor: DODECYL-BETA-D-MALTOSIDE, GLYCEROL, Lipid A biosynthesis lauroyl acyltransferase, ...
Authors:Dovala, D.L, Hu, Q, Metzger IV, L.E.
Deposit date:2016-06-28
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-guided enzymology of the lipid A acyltransferase LpxM reveals a dual activity mechanism.
Proc.Natl.Acad.Sci.USA, 113, 2016
5KZL
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BU of 5kzl by Molmil
Structure of Heme Oxygenase from Leptospira interrogans
Descriptor: Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Klinke, S, Soldano, A, Otero, L.H, Rivera, M, Catalano-Dupuy, D.L, Ceccarelli, E.A.
Deposit date:2016-07-25
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural and mutational analyses of the Leptospira interrogans virulence-related heme oxygenase provide insights into its catalytic mechanism.
PLoS ONE, 12, 2017
1KJU
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BU of 1kju by Molmil
Ca2+-ATPase in the E2 State
Descriptor: Sarcoplasmic/endoplasmic reticulum calcium ATPase 1a
Authors:Xu, C, Rice, W.J, He, W, Stokes, D.L.
Deposit date:2001-12-05
Release date:2001-12-19
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (6 Å)
Cite:A structural model for the catalytic cycle of Ca(2+)-ATPase.
J.Mol.Biol., 316, 2002
1EFP
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BU of 1efp by Molmil
ELECTRON TRANSFER FLAVOPROTEIN (ETF) FROM PARACOCCUS DENITRIFICANS
Descriptor: ADENOSINE MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, PROTEIN (ELECTRON TRANSFER FLAVOPROTEIN)
Authors:Roberts, D.L, Salazar, D, Fulmer, J.P, Frerman, F.E, Kim, J.J.-P.
Deposit date:1998-12-18
Release date:1999-08-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Paracoccus denitrificans electron transfer flavoprotein: structural and electrostatic analysis of a conserved flavin binding domain.
Biochemistry, 38, 1999
6JD1
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BU of 6jd1 by Molmil
Cryo-EM Structure of Sulfolobus solfataricus ketol-acid reductoisomerase (Sso-KARI) in complex with Mg2+, NADH, and CPD at pH7.5
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, MAGNESIUM ION, Putative ketol-acid reductoisomerase 2, ...
Authors:Chen, C.Y, Chang, Y.C, Lin, K.F, Huang, C.H, Lin, B.L, Ko, T.P, Hsieh, D.L, Tsai, M.D.
Deposit date:2019-01-30
Release date:2019-04-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Use of Cryo-EM To Uncover Structural Bases of pH Effect and Cofactor Bispecificity of Ketol-Acid Reductoisomerase.
J. Am. Chem. Soc., 141, 2019
6RJ0
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BU of 6rj0 by Molmil
Atlantic Cod Nervous Necrosis Virus-Like Particle produced in Nicotiana benthamiana
Descriptor: Coat protein
Authors:Hurdiss, D.L, Ranson, N.A.
Deposit date:2019-04-25
Release date:2019-07-17
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Plant-Made Nervous Necrosis Virus-Like Particles Protect Fish Against Disease.
Front Plant Sci, 10, 2019
6JD2
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BU of 6jd2 by Molmil
Crystal structure of Sulfolobus solfataricus ketol-acid reductoisomerase (Sso-KARI) in complex with Mg2+ at pH8.5
Descriptor: BETA-MERCAPTOETHANOL, MAGNESIUM ION, Putative ketol-acid reductoisomerase 2
Authors:Chen, C.Y, Chang, Y.C, Lin, K.F, Huang, C.H, Lin, B.L, Ko, T.P, Hsieh, D.L, Tsai, M.D.
Deposit date:2019-01-30
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Use of Cryo-EM To Uncover Structural Bases of pH Effect and Cofactor Bispecificity of Ketol-Acid Reductoisomerase.
J.Am.Chem.Soc., 141, 2019
6JCW
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BU of 6jcw by Molmil
Cryo-EM Structure of Sulfolobus solfataricus ketol-acid reductoisomerase (Sso-KARI) with Mg2+ at pH8.5
Descriptor: MAGNESIUM ION, ketol-acid reductoisomerase
Authors:Chen, C.Y, Chang, Y.C, Lin, K.F, Huang, C.H, Lin, B.L, Ko, T.P, Hsieh, D.L, Tsai, M.D.
Deposit date:2019-01-30
Release date:2019-04-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Use of Cryo-EM To Uncover Structural Bases of pH Effect and Cofactor Bispecificity of Ketol-Acid Reductoisomerase.
J. Am. Chem. Soc., 141, 2019
6RTJ
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BU of 6rtj by Molmil
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1-[(dimethylamino)methyl]-2-naphthol at 1 hour of soaking
Descriptor: 1-[(dimethylamino)methyl]naphthalen-2-ol, CALCIUM ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Angelucci, F, Silvestri, I, Fata, F, Williams, D.L.
Deposit date:2019-05-24
Release date:2020-01-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ectopic suicide inhibition of thioredoxin glutathione reductase.
Free Radic Biol Med, 147, 2020
6RTO
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BU of 6rto by Molmil
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1-[(dimethylamino)methyl]-2-naphthol at 4 hours of soaking
Descriptor: 1-methylidenenaphthalen-2-one, FLAVIN-ADENINE DINUCLEOTIDE, TRIETHYLENE GLYCOL, ...
Authors:Angelucci, F, Silvestri, I, Fata, F, Williams, D.L.
Deposit date:2019-05-24
Release date:2020-01-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ectopic suicide inhibition of thioredoxin glutathione reductase.
Free Radic Biol Med, 147, 2020
6JCZ
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BU of 6jcz by Molmil
Cryo-EM Structure of Sulfolobus solfataricus ketol-acid reductoisomerase (Sso-KARI) in complex with Mg2+, NADPH, and CPD at pH7.5
Descriptor: MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative ketol-acid reductoisomerase 2, ...
Authors:Chen, C.Y, Chang, Y.C, Lin, K.F, Huang, C.H, Lin, B.L, Ko, T.P, Hsieh, D.L, Tsai, M.D.
Deposit date:2019-01-30
Release date:2019-04-17
Last modified:2019-05-01
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Use of Cryo-EM To Uncover Structural Bases of pH Effect and Cofactor Bispecificity of Ketol-Acid Reductoisomerase.
J. Am. Chem. Soc., 141, 2019
6RTM
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BU of 6rtm by Molmil
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1-[(dimethylamino)methyl]-2-naphthol at 2 hour of soaking
Descriptor: 1-methylidenenaphthalen-2-one, FLAVIN-ADENINE DINUCLEOTIDE, POTASSIUM ION, ...
Authors:Angelucci, F, Silvestri, I, Fata, F, Williams, D.L.
Deposit date:2019-05-24
Release date:2020-01-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Ectopic suicide inhibition of thioredoxin glutathione reductase.
Free Radic Biol Med, 147, 2020
6S6L
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BU of 6s6l by Molmil
Cryo-EM structure of murine norovirus (MNV-1)
Descriptor: Capsid protein
Authors:Snowden, J.S, Hurdiss, D.L, Adeyemi, O.O, Ranson, N.A, Herod, M.R, Stonehouse, N.J.
Deposit date:2019-07-03
Release date:2020-05-13
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Dynamics in the murine norovirus capsid revealed by high-resolution cryo-EM.
Plos Biol., 18, 2020
6JCV
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BU of 6jcv by Molmil
Cryo-EM structure of Sulfolobus solfataricus ketol-acid reductoisomerase (Sso-KARI) with Mg2+ at pH7.5
Descriptor: MAGNESIUM ION, Putative ketol-acid reductoisomerase 2
Authors:Chen, C.Y, Chang, Y.C, Lin, K.F, Huang, C.H, Lin, B.L, Ko, T.P, Hsieh, D.L, Tsai, M.D.
Deposit date:2019-01-30
Release date:2019-04-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Use of Cryo-EM To Uncover Structural Bases of pH Effect and Cofactor Bispecificity of Ketol-Acid Reductoisomerase.
J. Am. Chem. Soc., 141, 2019
1QHM
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BU of 1qhm by Molmil
ESCHERICHIA COLI PYRUVATE FORMATE LYASE LARGE DOMAIN
Descriptor: PYRUVATE FORMATE-LYASE
Authors:Leppanen, V.-M, Merckel, M.C, Ollis, D.L, Wong, K.K, Kozarich, J.W, Goldman, A.
Deposit date:1999-05-19
Release date:2000-05-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Pyruvate formate lyase is structurally homologous to type I ribonucleotide reductase.
Structure Fold.Des., 7, 1999
1QN1
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BU of 1qn1 by Molmil
SOLUTION STRUCTURE OF DESULFOVIBRIO GIGAS FERRICYTOCHROME C3, NMR, 15 STRUCTURES
Descriptor: CYTOCHROME C3, HEME C
Authors:Brennan, L, Messias, A.C, Legall, J, Turner, D.L, Xavier, A.V.
Deposit date:1999-10-11
Release date:2000-10-12
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Structural Basis for the Network of Functional Cooperativities in Cytochromes C3 from Desulfovibrio Gigas: Solution Structures of the Oxidised and Reduced States
J.Mol.Biol., 298, 2000
4M65
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BU of 4m65 by Molmil
In situ thermolysin crystallized on a MiTeGen micromesh with asparagine ligand
Descriptor: 1,2-ETHANEDIOL, ASPARAGINE, CALCIUM ION, ...
Authors:Yin, X, Scalia, A, Leroy, L, Cuttitta, C.M, Polizzo, G.M, Ericson, D.L, Roessler, C.G, Campos, O, Agarwal, R, Allaire, M, Orville, A.M, Jackimowicz, R, Ma, M.Y, Sweet, R.M, Soares, A.S.
Deposit date:2013-08-08
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Hitting the target: fragment screening with acoustic in situ co-crystallization of proteins plus fragment libraries on pin-mounted data-collection micromeshes
Acta Crystallogr.,Sect.D, D70
4LTQ
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BU of 4ltq by Molmil
Bacterial sodium channel in low calcium, P42 space group
Descriptor: Ion transport protein
Authors:Shaya, D, Findeisen, F, Abderemane-Ali, F, Arrigoni, C, Wong, S, Reddy Nurva, S, Loussouarn, G, Minor, D.L.
Deposit date:2013-07-23
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (5.5 Å)
Cite:Structure of a prokaryotic sodium channel pore reveals essential gating elements and an outer ion binding site common to eukaryotic channels.
J.Mol.Biol., 426, 2014
6PBO
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BU of 6pbo by Molmil
Staphylococcus aureus Dihydrofolate reductase in complex with NADPH and UCP1232
Descriptor: (4-{6-[(2S)-4-(2,4-diamino-6-ethylpyrimidin-5-yl)but-3-yn-2-yl]-2H-1,3-benzodioxol-4-yl}phenyl)acetic acid, Dihydrofolate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Reeve, S.M, Wright, D.L.
Deposit date:2019-06-14
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.649 Å)
Cite:Toward Broad Spectrum Dihydrofolate Reductase Inhibitors Targeting Trimethoprim Resistant Enzymes Identified in Clinical Isolates of Methicillin ResistantStaphylococcus aureus.
Acs Infect Dis., 5, 2019
4LWS
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BU of 4lws by Molmil
EsxA : EsxB (SeMet) hetero-dimer from Thermomonospora curvata
Descriptor: ACETATE ION, GLYCEROL, Uncharacterized protein
Authors:Dovala, D.L, Cox, J.S, Stroud, R.M, Rosenberg, O.S.
Deposit date:2013-07-28
Release date:2015-02-04
Last modified:2016-09-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Substrates Control Multimerization and Activation of the Multi-Domain ATPase Motor of Type VII Secretion.
Cell(Cambridge,Mass.), 161, 2015
1QBH
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SOLUTION STRUCTURE OF A BACULOVIRAL INHIBITOR OF APOPTOSIS (IAP) REPEAT
Descriptor: INHIBITOR OF APOPTOSIS PROTEIN (2MIHB/C-IAP-1), ZINC ION
Authors:Hinds, M.G, Norton, R.S, Vaux, D.L, Day, C.L.
Deposit date:1999-04-20
Release date:1999-10-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a baculoviral inhibitor of apoptosis (IAP) repeat.
Nat.Struct.Biol., 6, 1999

226707

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