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PDB: 1157 results
2KY8
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BU of 2ky8 by Molmil
Solution structure and dynamic analysis of chicken MBD2 methyl binding domain bound to a target methylated DNA sequence
Descriptor: DNA (5'-D(*GP*AP*GP*CP*(5CM)P*GP*AP*TP*(TED)P*CP*C)-3'), DNA (5'-D(*GP*GP*AP*AP*TP*(5CM)P*GP*GP*CP*(TED)P*C)-3'), MANGANESE (II) ION, ...
Authors:Williams Jr, D.C, Scarsdale Jr, J.N.
Deposit date:2010-05-18
Release date:2011-05-18
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure and dynamic analysis of chicken MBD2 methyl binding domain bound to a target-methylated DNA sequence.
Nucleic Acids Res., 39, 2011
2L2L
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BU of 2l2l by Molmil
Solution structure of the coiled-coil complex between MBD2 and p66alpha
Descriptor: Methyl-CpG-binding domain protein 2, Transcriptional repressor p66-alpha
Authors:Williams Jr, D.C, Scarsdale Jr, N.
Deposit date:2010-08-20
Release date:2011-05-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:p66Alpha-MBD2 coiled-coil interaction and recruitment of Mi-2 are critical for globin gene silencing by the MBD2-NuRD complex.
Proc.Natl.Acad.Sci.USA, 108, 2011
4OAF
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BU of 4oaf by Molmil
Crystal structure of the cytosolic domain of mouse MiD51
Descriptor: Mitochondrial dynamic protein MID51
Authors:Loson, O.C, Kaiser, J.T, Chan, D.C.
Deposit date:2014-01-04
Release date:2014-01-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Mitochondrial Fission Receptor MiD51 Requires ADP as a Cofactor.
Structure, 22, 2014
4P5O
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BU of 4p5o by Molmil
Structure of an RBX1-UBC12~NEDD8-CUL1-DCN1 complex: a RING-E3-E2~ubiquitin-like protein-substrate intermediate trapped in action
Descriptor: Cullin-1, DCN1-like protein 1, E3 ubiquitin-protein ligase RBX1, ...
Authors:Scott, D.C, Schulman, B.A.
Deposit date:2014-03-18
Release date:2014-07-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.1071 Å)
Cite:Structure of a RING E3 Trapped in Action Reveals Ligation Mechanism for the Ubiquitin-like Protein NEDD8.
Cell, 157, 2014
3VYO
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BU of 3vyo by Molmil
Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2 N140 truncation mutant (resideus 140-408)
Descriptor: Probable conserved lipoprotein LPPS
Authors:Li, W.J, Li, D.F, Bi, L.J, Wang, D.C.
Deposit date:2012-09-30
Release date:2013-06-19
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of L,D-transpeptidase LdtMt2 in complex with meropenem reveals the mechanism of carbapenem against Mycobacterium tuberculosis
Cell Res., 23, 2013
3VCY
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BU of 3vcy by Molmil
Structure of MurA (UDP-N-acetylglucosamine enolpyruvyl transferase), from Vibrio fischeri in complex with substrate UDP-N-acetylglucosamine and the drug fosfomycin.
Descriptor: GLYCEROL, PHOSPHATE ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase, ...
Authors:Bensen, D.C, Rodriguez, S, Nix, J, Cunningham, M.L, Tari, L.W.
Deposit date:2012-01-04
Release date:2012-04-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.925 Å)
Cite:Structure of MurA (UDP-N-acetylglucosamine enolpyruvyl transferase) from Vibrio fischeri in complex with substrate UDP-N-acetylglucosamine and the drug fosfomycin.
Acta Crystallogr.,Sect.F, 68, 2012
3VDP
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BU of 3vdp by Molmil
Structure and biochemical studies of the recombination mediator protein RecR in RecFOR pathway
Descriptor: IMIDAZOLE, Recombination protein recR, ZINC ION
Authors:Tang, Q, Yan, X.X, Liang, D.C.
Deposit date:2012-01-05
Release date:2012-12-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.451 Å)
Cite:RecOR complex including RecR N-N dimer and RecO monomer displays a high affinity for ssDNA
Nucleic Acids Res., 40, 2012
3VE5
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BU of 3ve5 by Molmil
Structure of recombination mediator protein RecR16-196 deletion mutant
Descriptor: IMIDAZOLE, Recombination protein recR, ZINC ION
Authors:Tang, Q, Yan, X.X, Liang, D.C.
Deposit date:2012-01-07
Release date:2012-12-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:RecOR complex including RecR N-N dimer and RecO monomer displays a high affinity for ssDNA
Nucleic Acids Res., 40, 2012
3VPV
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BU of 3vpv by Molmil
Crystal Structure of Pseudomonas aeruginosa Tsi2
Descriptor: Tse2 specific immunity protein 2
Authors:Wang, W, Ding, J, Wang, D.C.
Deposit date:2012-03-13
Release date:2012-03-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Pseudomonas aeruginosa Tsi2
To be Published
3VDU
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BU of 3vdu by Molmil
Structure of recombination mediator protein RecRK21G mutant
Descriptor: Recombination protein recR, ZINC ION
Authors:Tang, Q, Yan, X.X, Liang, D.C.
Deposit date:2012-01-06
Release date:2012-12-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:RecOR complex including RecR N-N dimer and RecO monomer displays a high affinity for ssDNA
Nucleic Acids Res., 40, 2012
3VSG
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BU of 3vsg by Molmil
Crystal structure of iron free 1,6-APD, 2-Animophenol-1,6-Dioxygenase
Descriptor: 2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit, 2-amino-5-chlorophenol 1,6-dioxygenase beta subunit
Authors:Li, D.F, Hou, Y.J, Hu, Y, Wang, D.C, Liu, W.
Deposit date:2012-04-25
Release date:2013-01-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of aminophenol dioxygenase in complex with intermediate, product and inhibitor
Acta Crystallogr.,Sect.D, 69, 2013
3VPI
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BU of 3vpi by Molmil
Crystal structure of type VI effector Tse1 from Pseudomonas aeruginosa
Descriptor: FORMIC ACID, type VI secretion exported 1
Authors:Ding, J, Wang, W, Wang, D.C.
Deposit date:2012-03-04
Release date:2012-06-27
Last modified:2013-08-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into the Pseudomonas aeruginosa type VI virulence effector Tse1 bacteriolysis and self-protection mechanisms
J.Biol.Chem., 287, 2012
3VSI
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BU of 3vsi by Molmil
Crystal structure of native 1,6-APD (2-Animophenol-1,6-dioxygenase) complex with 4-Nitrocatechol
Descriptor: 2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit, 2-amino-5-chlorophenol 1,6-dioxygenase beta subunit, 4-NITROCATECHOL, ...
Authors:Li, D.F, Hou, Y.J, Hu, Y, Wang, D.C, Liu, W.
Deposit date:2012-04-25
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of aminophenol dioxygenase in complex with intermediate, product and inhibitor
Acta Crystallogr.,Sect.D, 69, 2013
4QF1
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BU of 4qf1 by Molmil
Crystal structure of unliganded CH59UA, the inferred unmutated ancestor of the RV144 anti-HIV antibody lineage producing CH59
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CH59UA Fab fragment of heavy chain, CHLORIDE ION, ...
Authors:Wiehe, K, Easterhoff, D, Luo, K, Nicely, N.I, Bradley, T, Jaeger, F.H, Dennison, S.M, Zhang, R, Lloyd, K.E, Stolarchuk, C, Parks, R, Sutherland, L.L, Scearce, R.M, Morris, L, Kaewkungwal, J, Nitayaphan, S, Pitisuttithum, P, Rerks-Ngarm, S, Michael, N, Kim, J, Kelsoe, G, Montefiori, D.C, Tomaras, G, Bonsignori, M, Santra, S, Kepler, T.B, Alam, S.M, Moody, M.A, Liao, H.-X, Haynes, B.F.
Deposit date:2014-05-19
Release date:2015-02-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Antibody Light-Chain-Restricted Recognition of the Site of Immune Pressure in the RV144 HIV-1 Vaccine Trial Is Phylogenetically Conserved.
Immunity, 41, 2014
3VYN
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BU of 3vyn by Molmil
Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2 N55 truncation mutant (resideus 55-408)
Descriptor: Probable conserved lipoprotein LPPS
Authors:Li, W.J, Li, D.F, Bi, L.J, Wang, D.C.
Deposit date:2012-09-30
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of L,D-transpeptidase LdtMt2 in complex with meropenem reveals the mechanism of carbapenem against Mycobacterium tuberculosis
Cell Res., 23, 2013
3VSJ
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BU of 3vsj by Molmil
Crystal structure of 1,6-APD (2-ANIMOPHENOL-1,6-DIOXYGENASE) complexed with intermediate products
Descriptor: (2Z,4Z)-2-imino-6-oxohex-4-enoic acid, (3E)-3-iminooxepin-2(3H)-one, 2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit, ...
Authors:Li, D.F, Hou, Y.J, Hu, Y, Wang, D.C, Liu, W.
Deposit date:2012-04-25
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of aminophenol dioxygenase in complex with intermediate, product and inhibitor
Acta Crystallogr.,Sect.D, 69, 2013
3VYP
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BU of 3vyp by Molmil
Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2-N140 adduct with meropenem
Descriptor: (2S,3R,4S)-4-{[(3S,5R)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid, GLYCEROL, Probable conserved lipoprotein LPPS
Authors:Li, W.J, Li, D.F, Bi, L.J, Wang, D.C.
Deposit date:2012-09-30
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of L,D-transpeptidase LdtMt2 in complex with meropenem reveals the mechanism of carbapenem against Mycobacterium tuberculosis
Cell Res., 23, 2013
3VPJ
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BU of 3vpj by Molmil
crystal structure of type VI effector Tse1 from Pseudomonas aeruginosa in complex with immune protein Tsi1
Descriptor: Tse1-specific immunity protein, type VI secretion exported 1
Authors:Ding, J, Wang, W, Wang, D.C.
Deposit date:2012-03-04
Release date:2012-06-27
Last modified:2013-08-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into the Pseudomonas aeruginosa type VI virulence effector Tse1 bacteriolysis and self-protection mechanisms
J.Biol.Chem., 287, 2012
3VSH
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BU of 3vsh by Molmil
Crystal structure of native 1,6-APD (with Iron), 2-Animophenol-1,6-Dioxygenase
Descriptor: 2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit, 2-amino-5-chlorophenol 1,6-dioxygenase beta subunit, FE (II) ION
Authors:Li, D.F, Hou, Y.J, Hu, Y, Wang, D.C, Liu, W.
Deposit date:2012-04-25
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of aminophenol dioxygenase in complex with intermediate, product and inhibitor
Acta Crystallogr.,Sect.D, 69, 2013
5UA0
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BU of 5ua0 by Molmil
Dimeric crystal structure of HTPA reductase from arabidopsis thaliana
Descriptor: 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic, SULFATE ION
Authors:Keown, J.K, Pearce, F.G, Goldstone, D.C.
Deposit date:2016-12-18
Release date:2017-12-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Plant DHDPR forms a dimer with unique secondary structure features that preclude higher-order assembly.
Biochem. J., 475, 2018
3WQK
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BU of 3wqk by Molmil
Crystal structure of Rv3378c with PO4
Descriptor: Diterpene synthase, PHOSPHATE ION
Authors:Chan, H.C, Feng, X, Ko, T.P, Huang, C.H, Hu, Y, Zheng, Y, Bogue, S, Nakano, C, Hoshino, T, Zhang, L, Lv, P, Liu, W, Crick, D.C, Liang, P.H, Wang, A.H, Oldfield, E, Guo, R.T.
Deposit date:2014-01-28
Release date:2014-02-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and inhibition of tuberculosinol synthase and decaprenyl diphosphate synthase from Mycobacterium tuberculosis.
J.Am.Chem.Soc., 136, 2014
5U5I
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BU of 5u5i by Molmil
The dimeric crystal structure of the selenomethionine derivative of HTPA Reductase from Sellaginella moellendorffii
Descriptor: CALCIUM ION, HTPA Reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Keown, J.R, Goldstone, D.C, Pearce, F.G.
Deposit date:2016-12-06
Release date:2017-12-06
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Plant DHDPR forms a dimer with unique secondary structure features that preclude higher-order assembly.
Biochem. J., 475, 2018
3WQM
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BU of 3wqm by Molmil
Crystal structure of Rv3378c with inhibitor BPH-629
Descriptor: Diterpene synthase, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Chan, H.C, Feng, X, Ko, T.P, Huang, C.H, Hu, Y, Zheng, Y, Bogue, S, Nakano, C, Hoshino, T, Zhang, L, Lv, P, Liu, W, Crick, D.C, Liang, P.H, Wang, A.H, Oldfield, E, Guo, R.T.
Deposit date:2014-01-28
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and inhibition of tuberculosinol synthase and decaprenyl diphosphate synthase from Mycobacterium tuberculosis.
J.Am.Chem.Soc., 136, 2014
3W8H
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BU of 3w8h by Molmil
Crystal structure of CCM3 in complex with the C-terminal regulatory domain of STK25
Descriptor: Programmed cell death protein 10, SULFATE ION, Serine/threonine-protein kinase 25
Authors:Xu, X, Wang, D.C, Ding, J.
Deposit date:2013-03-13
Release date:2013-07-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.426 Å)
Cite:Structural Basis for the Unique Heterodimeric Assembly between Cerebral Cavernous Malformation 3 and Germinal Center Kinase III.
Structure, 21, 2013
3WA5
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BU of 3wa5 by Molmil
Crystal Structure of type VI peptidoglycan muramidase effector Tse3 in complex with its cognate immunity protein Tsi3
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Tse3-specific immunity protein, ...
Authors:Ding, J, Wang, T, Liu, W, Wang, D.C.
Deposit date:2013-04-26
Release date:2013-10-02
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Complex structure of type VI peptidoglycan muramidase effector and a cognate immunity protein.
Acta Crystallogr.,Sect.D, 69, 2013

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