Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22297 results

3FZZ
DownloadVisualize
BU of 3fzz by Molmil
Structure of GrC
Descriptor: Granzyme C, SULFATE ION
Authors:Buckle, A.M, Kaiserman, D, Whisstock, J.C.
Deposit date:2009-01-27
Release date:2009-03-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of granzyme C reveals an unusual mechanism of protease autoinhibition
Proc.Natl.Acad.Sci.USA, 106, 2009
7Z81
DownloadVisualize
BU of 7z81 by Molmil
REP-related Chom18 variant with double TC mismatch
Descriptor: Chom18-TC DNA, STRONTIUM ION
Authors:Svoboda, J, Schneider, B, Berdar, D, Kolenko, P.
Deposit date:2022-03-16
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Conformation-based refinement of 18-mer DNA structures.
Acta Crystallogr D Struct Biol, 79, 2023
4A2N
DownloadVisualize
BU of 4a2n by Molmil
Crystal Structure of Ma-ICMT
Descriptor: CARDIOLIPIN, ISOPRENYLCYSTEINE CARBOXYL METHYLTRANSFERASE, PALMITIC ACID, ...
Authors:Yang, J, Kulkarni, K, Manolaridis, I, Zhang, Z, Dodd, R.B, Mas-Droux, C, Barford, D.
Deposit date:2011-09-27
Release date:2012-01-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Mechanism of Isoprenylcysteine Carboxyl Methylation from the Crystal Structure of the Integral Membrane Methyltransferase Icmt.
Mol.Cell, 44, 2011
5V72
DownloadVisualize
BU of 5v72 by Molmil
Crystal structure of NADPH-dependent glyoxylate/hydroxypyruvate reductase SMc04462 (SmGhrB) from Sinorhizobium meliloti in complex with citrate
Descriptor: CHLORIDE ION, CITRIC ACID, GLYCEROL, ...
Authors:Shabalin, I.G, Handing, K.B, Gasiorowska, O.A, Cooper, D.R, Matelska, D, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2017-03-17
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural, Biochemical, and Evolutionary Characterizations of Glyoxylate/Hydroxypyruvate Reductases Show Their Division into Two Distinct Subfamilies.
Biochemistry, 57, 2018
4A2Y
DownloadVisualize
BU of 4a2y by Molmil
STRUCTURE OF THE HUMAN EOSINOPHIL CATIONIC PROTEIN IN COMPLEX WITH CITRATE ANIONS
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CITRIC ACID, EOSINOPHIL CATIONIC PROTEIN
Authors:Boix, E, Pulido, D, Moussaoui, M, Nogues, V, Russi, S.
Deposit date:2011-09-29
Release date:2012-06-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Sulfate-Binding Site Structure of the Human Eosinophil Cationic Protein as Revealed by a New Crystal Form.
J.Struct.Biol., 179, 2012
4A9Z
DownloadVisualize
BU of 4a9z by Molmil
CRYSTAL STRUCTURE OF HUMAN P63 TETRAMERIZATION DOMAIN
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, TUMOR PROTEIN 63
Authors:Muniz, J.R.C, Coutandin, D, Salah, E, Chaikuad, A, Vollmar, M, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Dotsch, V, von Delft, F, Knapp, S.
Deposit date:2011-11-30
Release date:2011-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal Structure of Human P63 Tetramerization Domain
To be Published
7LUM
DownloadVisualize
BU of 7lum by Molmil
Human TRiC in ATP/AlFx closed state
Descriptor: T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, T-complex protein 1 subunit delta, ...
Authors:Knowlton, J.J, Gestaut, D, Ma, B, Taylor, G, Seven, A.B, Leitner, A, Wilson, G.J, Shanker, S, Yates, N.A, Prasad, B.V.V, Aebersold, R, Chiu, W, Frydman, J, Dermody, T.S.
Deposit date:2021-02-22
Release date:2021-03-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural and functional dissection of reovirus capsid folding and assembly by the prefoldin-TRiC/CCT chaperone network.
Proc.Natl.Acad.Sci.USA, 118, 2021
4AQH
DownloadVisualize
BU of 4aqh by Molmil
Plasminogen activator inhibitor type-1 in complex with the inhibitor AZ3976
Descriptor: PLASMINOGEN ACTIVATOR INHIBITOR 1, TERT-BUTYL 3-[(4-OXO-3H-PYRIDO[2,3-D]PYRIMIDIN-2-YL)AMINO]AZETIDINE-1-CARBOXYLATE
Authors:Fjellstrom, O, Deinum, J, Sjogren, T, Johansson, C, Geschwindner, S, Nerme, V, Legnehed, A, McPheat, J, Olsson, K, Bodin, C, Gustafsson, D.
Deposit date:2012-04-17
Release date:2012-11-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Characterization of a Small Molecule Inhibitor of Plasminogen Activator Inhibitor Type 1 that Accelerates the Transition Into the Latent Conformation
J.Biol.Chem., 288, 2013
2GJ7
DownloadVisualize
BU of 2gj7 by Molmil
Crystal Structure of a gE-gI/Fc complex
Descriptor: Glycoprotein E, Ig gamma-1 chain C region, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Sprague, E.R, Wang, C, Baker, D, Bjorkman, P.J.
Deposit date:2006-03-30
Release date:2006-05-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (5 Å)
Cite:Crystal Structure of the HSV-1 Fc Receptor Bound to Fc Reveals a Mechanism for Antibody Bipolar Bridging.
Plos Biol., 4, 2006
2GZX
DownloadVisualize
BU of 2gzx by Molmil
Crystal Structure of the TatD deoxyribonuclease MW0446 from Staphylococcus aureus. Northeast Structural Genomics Consortium Target ZR237.
Descriptor: NICKEL (II) ION, putative TatD related DNase
Authors:Vorobiev, S.M, Neely, H, Seetharaman, J, Wang, D, Fang, Y, Xiao, R, Acton, T, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-05-12
Release date:2006-07-11
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the TatD deoxyribonuclease MW0446 from Staphylococcus aureus. Northeast Structural Genomics Consortium Target ZR237.
To be Published
2GK7
DownloadVisualize
BU of 2gk7 by Molmil
Structural and Functional insights into the human Upf1 helicase core
Descriptor: PHOSPHATE ION, Regulator of nonsense transcripts 1
Authors:Cheng, Z, Muhlrad, D, Parker, R, Song, H.
Deposit date:2006-03-31
Release date:2007-01-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional insights into the human Upf1 helicase core
Embo J., 26, 2007
3DMU
DownloadVisualize
BU of 3dmu by Molmil
Crystal structure of Staphylococcal nuclease variant PHS T62K at cryogenic temperature
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, PHOSPHATE ION, Thermonuclease
Authors:Khangulov, V.S, Schlessman, J.L, Garcia-Moreno, E.B, Benning, M, Isom, D.
Deposit date:2008-07-01
Release date:2008-11-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Staphylococcal nuclease variant PHS T62K at cryogenic temperature
To be Published
2HE0
DownloadVisualize
BU of 2he0 by Molmil
Crystal structure of a human Notch1 ankyrin domain mutant
Descriptor: 1,2-ETHANEDIOL, Notch1 preproprotein variant
Authors:Gupta, D, Ehebauer, M.T, Chirgadze, D.Y, Martinez Arias, A, Blundell, T.L.
Deposit date:2006-06-21
Release date:2006-07-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a human Notch1 ankyrin domain mutant
TO BE PUBLISHED
8AFQ
DownloadVisualize
BU of 8afq by Molmil
Tube assembly of Atg18-PR72AA
Descriptor: Autophagy-related protein 18
Authors:Mann, D, Fromm, S, Martinez-Sanchez, A, Gopaldass, N, Mayer, A, Sachse, C.
Deposit date:2022-07-18
Release date:2023-11-01
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Atg18 oligomer organization in assembled tubes and on lipid membrane scaffolds.
Nat Commun, 14, 2023
8AFW
DownloadVisualize
BU of 8afw by Molmil
Tube assembly of Atg18-WT
Descriptor: Autophagy-related protein 18
Authors:Mann, D, Fromm, S, Martinez-Sanchez, A, Gopaldass, N, Mayer, A, Sachse, C.
Deposit date:2022-07-18
Release date:2023-11-01
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Atg18 oligomer organization in assembled tubes and on lipid membrane scaffolds.
Nat Commun, 14, 2023
8AFY
DownloadVisualize
BU of 8afy by Molmil
Subtomogram average of membrane-bound Atg18 oligomers
Descriptor: Autophagy-related protein 18
Authors:Mann, D, Fromm, S, Martinez-Sanchez, A, Gopaldass, N, Mayer, A, Sachse, C.
Deposit date:2022-07-18
Release date:2023-11-01
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (26 Å)
Cite:Atg18 oligomer organization in assembled tubes and on lipid membrane scaffolds.
Nat Commun, 14, 2023
4ABY
DownloadVisualize
BU of 4aby by Molmil
Crystal structure of Deinococcus radiodurans RecN head domain
Descriptor: DNA REPAIR PROTEIN RECN
Authors:Pellegrino, S, Radzimanowski, J, de Sanctis, D, McSweeney, S, Timmins, J.
Deposit date:2011-12-12
Release date:2012-12-12
Last modified:2012-12-26
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and Functional Characterization of an Smc-Like Protein Recn: New Insights Into Double-Strand Break Repair.
Structure, 20, 2012
8ALM
DownloadVisualize
BU of 8alm by Molmil
X-ray structure of human NCS-1 bound to Ric-8A
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Munoz-Reyes, D, Sanchez-Barrena, M.J.
Deposit date:2022-08-01
Release date:2023-12-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85402 Å)
Cite:The neuronal calcium sensor NCS-1 regulates the phosphorylation state and activity of the G alpha chaperone and GEF Ric-8A.
Elife, 12, 2023
8AHY
DownloadVisualize
BU of 8ahy by Molmil
X-ray structure of human NCS-1 bound to Ric-8A
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Munoz-Reyes, D, Sanchez-Barrena, M.J.
Deposit date:2022-07-25
Release date:2023-12-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The neuronal calcium sensor NCS-1 regulates the phosphorylation state and activity of the G alpha chaperone and GEF Ric-8A.
Elife, 12, 2023
8B20
DownloadVisualize
BU of 8b20 by Molmil
NDM-1 metallo-beta-lactamase in complex with triazole-based inhibitor CP57
Descriptor: 1,2-ETHANEDIOL, 2-[(~{E})-[3-sulfanyl-5-[4-(trifluoromethyl)phenyl]-1,2,4-triazol-4-yl]iminomethyl]benzoic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Vascon, F, Lazzarato, L, Bersani, M, Gianquinto, E, Docquier, J.D, Spyrakis, F, Tondi, D, Cendron, L.
Deposit date:2022-09-12
Release date:2023-12-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure-Based Optimization of 1,2,4-Triazole-3-Thione Derivatives: Improving Inhibition of NDM-/VIM-Type Metallo-beta-Lactamases and Synergistic Activity on Resistant Bacteria.
Pharmaceuticals, 16, 2023
8ALH
DownloadVisualize
BU of 8alh by Molmil
X-ray structure of human NCS-1 bound to Ric-8A
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Munoz-Reyes, D, Sanchez-Barrena, M.J.
Deposit date:2022-08-01
Release date:2023-12-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:The neuronal calcium sensor NCS-1 regulates the phosphorylation state and activity of the G alpha chaperone and GEF Ric-8A.
Elife, 12, 2023
3DHN
DownloadVisualize
BU of 3dhn by Molmil
Crystal structure of the putative epimerase Q89Z24_BACTN from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium target BtR310.
Descriptor: NAD-dependent epimerase/dehydratase
Authors:Vorobiev, S.M, Su, M, Seetharaman, J, Wang, D, Ciccosanti, C, Foote, L.E, Janjua, H, Xiao, R, Acton, T, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-06-18
Release date:2008-08-12
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the putative epimerase Q89Z24_BACTN from Bacteroides thetaiotaomicron.
To be Published
3RK3
DownloadVisualize
BU of 3rk3 by Molmil
Truncated SNARE complex with complexin
Descriptor: Complexin-1, SNAP25, Syntaxin 1a, ...
Authors:Kuemmel, D, Reinisch, K.M.
Deposit date:2011-04-17
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Complexin cross-links prefusion SNAREs into a zigzag array.
Nat.Struct.Mol.Biol., 18, 2011
4AKX
DownloadVisualize
BU of 4akx by Molmil
Structure of the heterodimeric complex ExoU-SpcU from the type III secretion system (T3SS) of Pseudomonas aeruginosa
Descriptor: EXOU, SPCU
Authors:Gendrin, C, Contreras-Martel, C, Bouillot, S, Elsen, S, Lemaire, D, Skoufias, D.A, Huber, P, Attree, I, Dessen, A.
Deposit date:2012-02-29
Release date:2012-04-18
Last modified:2012-05-30
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Structural Basis of Cytotoxicity Mediated by the Type III Secretion Toxin Exou from Pseudomonas Aeruginosa
Plos Pathog., 8, 2012
2GOK
DownloadVisualize
BU of 2gok by Molmil
Crystal structure of the imidazolonepropionase from Agrobacterium tumefaciens at 1.87 A resolution
Descriptor: CHLORIDE ION, FE (III) ION, GLYCEROL, ...
Authors:Tyagi, R, Kumaran, D, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-04-13
Release date:2006-04-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:X-ray structure of imidazolonepropionase from Agrobacterium tumefaciens at 1.87 A resolution.
Proteins, 69, 2007

223790

数据于2024-08-14公开中

PDB statisticsPDBj update infoContact PDBjnumon