Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22297 件

8A9A
DownloadVisualize
BU of 8a9a by Molmil
Single Particle cryo-EM of the lipid binding protein P116 (MPN213) from Mycoplasma pneumoniae at 3.3 Angstrom resolution.
分子名称: Lipid binding protein P116 (MPN213)
著者Sprankel, L, Vizarraga, D.
登録日2022-06-28
公開日2023-02-22
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Essential protein P116 extracts cholesterol and other indispensable lipids for Mycoplasmas.
Nat.Struct.Mol.Biol., 30, 2023
3FWG
DownloadVisualize
BU of 3fwg by Molmil
Ferric camphor bound Cytochrome P450cam, Arg365Leu, Glu366Gln, monoclinic crystal form
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Camphor 5-monooxygenase, ...
著者Schlichting, I, Von Koenig, K, Aldag, C, Hilvert, D.
登録日2009-01-18
公開日2009-03-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Probing the role of the proximal heme ligand in cytochrome P450cam by recombinant incorporation of selenocysteine.
Proc.Natl.Acad.Sci.USA, 106, 2009
3UQ4
DownloadVisualize
BU of 3uq4 by Molmil
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) mutant F247L (F16L)
分子名称: Gamma-aminobutyric-acid receptor subunit beta-1, SODIUM ION
著者Gonzalez-Gutierrez, G, Lukk, T, Agarwal, V, Papke, D, Nair, S.K, Grosman, C.
登録日2011-11-19
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
3FT2
DownloadVisualize
BU of 3ft2 by Molmil
Crystal Structure of a citrulline peptide variant of the minor histocompatibility peptide HA-1 in complex with HLA-A2
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
著者Reiser, J.-B, Gras, S, Chouquet, A, Le Gorrec, M, Spierings, E, Goulmy, E, Housset, D.
登録日2009-01-12
公開日2009-04-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Steric hindrance and fast dissociation explain the lack of immunogenicity of the minor histocompatibility HA-1Arg Null allele.
J.Immunol., 182, 2009
5TC3
DownloadVisualize
BU of 5tc3 by Molmil
Structure of IMP dehydrogenase from Ashbya gossypii bound to ATP and GDP
分子名称: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, ...
著者Fernandez-Justel, D, de Pereda, J.M, Revuelta, J.L, Buey, R.M.
登録日2016-09-14
公開日2017-06-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.462 Å)
主引用文献A nucleotide-controlled conformational switch modulates the activity of eukaryotic IMP dehydrogenases.
Sci Rep, 7, 2017
3UTB
DownloadVisualize
BU of 3utb by Molmil
Crystal Structure of Nucleosome Core Particle Assembled with the 146b Alpha-Satellite Sequence (NCP146b)
分子名称: 146-mer DNA, Histone H2A, Histone H2B 1.1, ...
著者Chua, E.Y.D, Vasudevan, D, Davey, G.E, Wu, B, Davey, C.A.
登録日2011-11-25
公開日2012-04-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The mechanics behind DNA sequence-dependent properties of the nucleosome
Nucleic Acids Res., 40, 2012
3FT3
DownloadVisualize
BU of 3ft3 by Molmil
Crystal Structure of the minor histocompatibility peptide HA-1His in complex with HLA-A2
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
著者Reiser, J.-B, Gras, S, Chouquet, A, Le Gorrec, M, Spierings, E, Goulmy, E, Housset, D.
登録日2009-01-12
公開日2009-04-28
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Steric hindrance and fast dissociation explain the lack of immunogenicity of the minor histocompatibility HA-1Arg Null allele.
J.Immunol., 182, 2009
3SXW
DownloadVisualize
BU of 3sxw by Molmil
Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR69.
分子名称: Glucose-6-phosphate isomerase
著者Vorobiev, S, Su, M, Nivon, L, Seetharaman, J, Patel, P, Xiao, R, Maglaqui, M, Ciccosanti, C, Baker, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2011-07-15
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR69.
To be Published
2JBO
DownloadVisualize
BU of 2jbo by Molmil
Protein kinase MK2 in complex with an inhibitor (crystal form-1, soaking)
分子名称: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,5,6,7-TETRAHYDRO-4H-PYRROLO[3,2-C]PYRIDIN-4-ONE, MAP KINASE-ACTIVATED PROTEIN KINASE 2, PHOSPHATE ION
著者Hillig, R.C, Eberspaecher, U, Monteclaro, F, Huber, M, Nguyen, D, Mengel, A, Muller-Tiemann, B, Egner, U.
登録日2006-12-09
公開日2007-03-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural Basis for a High Affinity Inhibitor Bound to Protein Kinase Mk2.
J.Mol.Biol., 369, 2007
7LUP
DownloadVisualize
BU of 7lup by Molmil
Human TRiC/CCT complex with reovirus outer capsid protein sigma-3
分子名称: Outer capsid protein sigma-3, T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, ...
著者Knowlton, J.J, Gestaut, D, Ma, B, Taylor, G, Seven, A.B, Leitner, A, Wilson, G.J, Shanker, S, Yates, N.A, Prasad, B.V.V, Aebersold, R, Chiu, W, Frydman, J, Dermody, T.S.
登録日2021-02-22
公開日2021-03-03
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (6.2 Å)
主引用文献Structural and functional dissection of reovirus capsid folding and assembly by the prefoldin-TRiC/CCT chaperone network.
Proc.Natl.Acad.Sci.USA, 118, 2021
5TJB
DownloadVisualize
BU of 5tjb by Molmil
I-II linker of TRPML1 channel at pH 4.5
分子名称: Mucolipin-1
著者Li, M, Zhang, W.K, Benvin, N.M, Zhou, X, Su, D, Li, H, Wang, S, Michailidis, I.E, Tong, L, Li, X, Yang, J.
登録日2016-10-04
公開日2017-01-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of dual Ca(2+)/pH regulation of the endolysosomal TRPML1 channel.
Nat. Struct. Mol. Biol., 24, 2017
3FWF
DownloadVisualize
BU of 3fwf by Molmil
Ferric camphor bound cytochrome P450cam containing a Selenocysteine as the 5th heme ligand, monoclinic crystal form
分子名称: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
著者Schlichting, I, Von Koenig, K, Aldag, C, Hilvert, D.
登録日2009-01-18
公開日2009-03-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Probing the role of the proximal heme ligand in cytochrome P450cam by recombinant incorporation of selenocysteine.
Proc.Natl.Acad.Sci.USA, 106, 2009
5T6U
DownloadVisualize
BU of 5t6u by Molmil
Crystal structure of mouse cathepsin K at 2.9 Angstroms resolution.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cathepsin K, SULFATE ION
著者Law, S, Aguda, A, Nguyen, N, Brayer, G, Bromme, D.
登録日2016-09-01
公開日2017-01-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Identification of mouse cathepsin K structural elements that regulate the potency of odanacatib.
Biochem. J., 474, 2017
3FXV
DownloadVisualize
BU of 3fxv by Molmil
Identification of an N-oxide pyridine GW4064 analogue as a potent FXR agonist
分子名称: 12-meric peptide from Nuclear receptor coactivator 1, 6-(4-{[3-(3,5-dichloropyridin-4-yl)-5-(1-methylethyl)isoxazol-4-yl]methoxy}-2-methylphenyl)-1-methyl-1H-indole-3-carbox ylic acid, NR1H4 protein
著者Feng, S, Yang, M, He, Y, Chen, L, Zhang, Z, Wang, Z, Hong, D, Richter, H, Benson, G.M, Bleicher, K, Grether, U, Martin, R, Plancher, J.-M, Kuhn, B, Rudolph, M.G.
登録日2009-01-21
公開日2009-04-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Identification of an N-oxide pyridine GW4064 analog as a potent FXR agonist
Bioorg.Med.Chem.Lett., 19, 2009
3URI
DownloadVisualize
BU of 3uri by Molmil
Endothiapepsin-DB5 complex.
分子名称: DB5 peptide, Endothiapepsin
著者Bailey, D, Sanz-Aparicio, J, Albert, A, Cooper, J.B.
登録日2011-11-22
公開日2012-04-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An analysis of subdomain orientation, conformational change and disorder in relation to crystal packing of aspartic proteinases.
Acta Crystallogr.,Sect.D, 68, 2012
3UWB
DownloadVisualize
BU of 3uwb by Molmil
Crystal structure of a probable peptide deformylase from strucynechococcus phage S-SSM7 in complex with actinonin
分子名称: 1,2-ETHANEDIOL, ACTINONIN, CHLORIDE ION, ...
著者Lorimer, D, Abendroth, J, Edwards, T.E, Burgin, A, Segall, A, Rohwer, F.
登録日2011-12-01
公開日2013-01-09
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and function of a cyanophage-encoded peptide deformylase.
ISME J, 7, 2013
3FZ6
DownloadVisualize
BU of 3fz6 by Molmil
Crystal structure of glutamate decarboxylase beta from Escherichia coli: complex with xenon
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Glutamate decarboxylase beta, XENON
著者Malashkevich, V.N, De Biase, D, Bossa, F.
登録日2009-01-23
公開日2009-02-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Crystal structure of glutamate decarboxylase beta from Escherichia coli: complex with xenon
To be Published
3US8
DownloadVisualize
BU of 3us8 by Molmil
Crystal Structure of an isocitrate dehydrogenase from Sinorhizobium meliloti 1021
分子名称: Isocitrate dehydrogenase [NADP], SULFATE ION
著者Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, LaFleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-11-23
公開日2011-12-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of an isocitrate dehydrogenase from Sinorhizobium meliloti 1021
To be Published
2JIC
DownloadVisualize
BU of 2jic by Molmil
High resolution structure of xylanase-II from one micron beam experiment
分子名称: XYLANASE-II
著者Moukhametzianov, R, Burghammer, M, Edwards, P.C, Petitdemange, S, Popov, D, Fransen, M, Schertler, G.F, Riekel, C.
登録日2007-02-27
公開日2008-05-13
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Protein Crystallography with a Micrometre-Sized Synchrotron-Radiation Beam.
Acta Crystallogr.,Sect.D, 64, 2008
3UWL
DownloadVisualize
BU of 3uwl by Molmil
Crystal structure of Enteroccocus faecalis thymidylate synthase (EfTS) in complex with 5-formyl tetrahydrofolate
分子名称: 1,2-ETHANEDIOL, N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, SULFATE ION, ...
著者Pozzi, C, Catalano, A, Cortesi, D, Luciani, R, Ferrari, S, Fritz, T, Costi, M.P, Mangani, S.
登録日2011-12-02
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献The structure of Enterococcus faecalis thymidylate synthase provides clues about folate bacterial metabolism.
Acta Crystallogr.,Sect.D, 68, 2012
2JDS
DownloadVisualize
BU of 2jds by Molmil
Structure of cAMP-dependent protein kinase complexed with A-443654
分子名称: (2S)-1-(1H-INDOL-3-YL)-3-{[5-(3-METHYL-1H-INDAZOL-5-YL)PYRIDIN-3-YL]OXY}PROPAN-2-AMINE, CAMP-DEPENDENT PROTEIN KINASE, CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA
著者Davies, T.G, Verdonk, M.L, Graham, B, Saalau-Bethell, S, Hamlett, C.C.F, McHardy, T, Collins, I, Garrett, M.D, Workman, P, Woodhead, S.J, Jhoti, H, Barford, D.
登録日2007-01-12
公開日2007-02-13
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Structural Comparison of Inhibitor Binding to Pkb, Pka and Pka-Pkb Chimera
J.Mol.Biol., 367, 2007
5T75
DownloadVisualize
BU of 5t75 by Molmil
Human carbonic anhydrase II G132C_C206S double mutant in complex with SA-2
分子名称: 4-[(E)-(4-aminophenyl)diazenyl]benzenesulfonamide, Carbonic anhydrase 2, ZINC ION
著者DuBay, K.H, Iwan, K, Osorio-Planes, L, Geissler, P, Groll, M, Trauner, D, Broichhagen, J.
登録日2016-09-02
公開日2017-09-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A Predictive Approach for the Optical Control of Carbonic Anhydrase II Activity.
ACS Chem. Biol., 13, 2018
2JI3
DownloadVisualize
BU of 2ji3 by Molmil
X-ray structure of the iron-peroxide intermediate of superoxide reductase (E114A mutant) from Desulfoarculus baarsii
分子名称: CALCIUM ION, Desulfoferrodoxin, FE (III) ION, ...
著者Katona, G, Carpentier, P, Niviere, V, Amara, P, Adam, V, Ohana, J, Tsanov, N, Bourgeois, D.
登録日2007-02-24
公開日2007-05-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Raman-assisted crystallography reveals end-on peroxide intermediates in a nonheme iron enzyme.
Science, 316, 2007
2JEO
DownloadVisualize
BU of 2jeo by Molmil
Crystal structure of human uridine-cytidine kinase 1
分子名称: URIDINE-CYTIDINE KINASE 1
著者Kosinska, U, Stenmark, P, Arrowsmith, C, Berglund, H, Busam, R, Collins, R, Edwards, A, Ericsson, U.B, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmberg Schiavone, L, Hogbom, M, Johansson, I, Karlberg, T, Kotenyova, T, Moche, M, Nilsson, M.E.P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Sundstrom, M, Uppenberg, J, Uppsten, M, Thorsell, A.G, van den Berg, S, Weigelt, J, Welin, M, Nordlund, P, Structural Genomics Consortium (SGC)
登録日2007-01-18
公開日2007-01-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of Human Uridine-Cytidine Kinase 1
To be Published
2JKK
DownloadVisualize
BU of 2jkk by Molmil
Focal Adhesion Kinase catalytic domain in complex with bis-anilino pyrimidine inhibitor
分子名称: 2-({5-CHLORO-2-[(2-METHOXY-4-MORPHOLIN-4-YLPHENYL)AMINO]PYRIMIDIN-4-YL}AMINO)-N-METHYLBENZAMIDE, FOCAL ADHESION KINASE 1, SULFATE ION
著者Lietha, D, Eck, M.J.
登録日2008-08-28
公開日2008-09-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of the Fak Kinase in Complex with Tae226 and Related Bis-Anilino Pyrimidine Inhibitors Reveal a Helical Dfg Conformation.
Plos One, 3, 2008

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon