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PDB: 76 results

4GQ6
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BU of 4gq6 by Molmil
Human menin in complex with MLL peptide
Descriptor: Histone-lysine N-methyltransferase MLL, Menin, PENTAETHYLENE GLYCOL, ...
Authors:Shi, A, Murai, M.J, He, S, Lund, G.L, Hartley, T, Purohit, T, Reddy, G, Chruszcz, M, Grembecka, J, Cierpicki, T.
Deposit date:2012-08-22
Release date:2012-09-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural insights into inhibition of the bivalent menin-MLL interaction by small molecules in leukemia.
Blood, 120, 2012
4GPQ
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Structural insights into inhibition of the bivalent menin-MLL interaction by small molecules in leukemia
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, Menin, ...
Authors:Shi, A, Murai, M.J, He, S, Lund, G.L, Hartley, T, Purohit, T, Reddy, G, Chruszcz, M, Grembecka, J, Cierpicki, T.
Deposit date:2012-08-21
Release date:2012-09-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structural insights into inhibition of the bivalent menin-MLL interaction by small molecules in leukemia.
Blood, 120, 2012
6WI7
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BU of 6wi7 by Molmil
RING1B-BMI1 fusion in closed conformation
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, E3 ubiquitin-protein ligase RING2, Polycomb complex protein BMI-1 chimera, ...
Authors:Cho, H.J, Cierpicki, T.
Deposit date:2020-04-08
Release date:2021-04-14
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:Small-molecule inhibitors targeting Polycomb repressive complex 1 RING domain.
Nat.Chem.Biol., 17, 2021
6WI8
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BU of 6wi8 by Molmil
Inhibitor compound-induced confrontational change in Ring1b-Bmi1 domain structure
Descriptor: E3 ubiquitin-protein ligase RING2,Polycomb complex protein BMI-1 chimera, ZINC ION
Authors:Cho, H.J, Cierpicki, T.
Deposit date:2020-04-09
Release date:2021-04-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.092 Å)
Cite:Small-molecule inhibitors targeting Polycomb repressive complex 1 RING domain.
Nat.Chem.Biol., 17, 2021
6WZW
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BU of 6wzw by Molmil
Ash1L SET domain in complex with AS-85
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Histone-lysine N-methyltransferase ASH1L, N-{[3-(3-carbamothioylphenyl)-1-{1-[(trifluoromethyl)sulfonyl]piperidin-4-yl}-1H-indol-6-yl]methyl}azetidine-3-carboxamide, ...
Authors:Li, H, Deng, J, Cierpicki, T, Grembecka, J.
Deposit date:2020-05-14
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Discovery of first-in-class inhibitors of ASH1L histone methyltransferase with anti-leukemic activity.
Nat Commun, 12, 2021
6X0P
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BU of 6x0p by Molmil
Ash1L SET domain Q2265A mutant in complex with AS-5
Descriptor: 3-[6-(aminomethyl)-1-(2-hydroxyethyl)-1H-indol-3-yl]benzene-1-carbothioamide, Histone-lysine N-methyltransferase ASH1L, S-ADENOSYLMETHIONINE, ...
Authors:Rogawski, D.S, Li, H, Borkin, D, Cierpicki, T, Grembecka, J.
Deposit date:2020-05-17
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Discovery of first-in-class inhibitors of ASH1L histone methyltransferase with anti-leukemic activity.
Nat Commun, 12, 2021
1V1T
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BU of 1v1t by Molmil
Crystal structure of the PDZ tandem of human syntenin in complex with TNEYKV peptide
Descriptor: BENZOIC ACID, SYNTENIN 1, TNEYKV PEPTIDE
Authors:Grembecka, J, Cierpicki, T, Devedjiev, Y, Cooper, D.R, Derewenda, U, Derewenda, Z.S.
Deposit date:2004-04-23
Release date:2005-06-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Binding of the Pdz Tandem of Syntenin to Target Proteins.
Biochemistry, 45, 2006
1W9Q
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BU of 1w9q by Molmil
Crystal structure of the PDZ tandem of human syntenin in complex with TNEFAF peptide
Descriptor: BENZOIC ACID, SYNTENIN 1, TNEFAF PEPTIDE
Authors:Grembecka, J, Cierpicki, T, Devedjiev, Y, Cooper, D.R, Derewenda, Z.S.
Deposit date:2004-10-15
Release date:2006-03-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Binding of the Pdz Tandem of Syntenin to Target Proteins.
Biochemistry, 45, 2006
6BY8
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BU of 6by8 by Molmil
Menin in complex with MI-1482
Descriptor: 1,2-ETHANEDIOL, 4-methyl-1-{[(2R)-5-oxomorpholin-2-yl]methyl}-5-[(4-{[6-(2,2,2-trifluoroethyl)thieno[2,3-d]pyrimidin-4-yl]amino}piperidin-1-yl)methyl]-1H-indole-2-carbonitrile, DIMETHYL SULFOXIDE, ...
Authors:Borkin, T, Klossowski, S, Pollock, J, Linhares, B, Cierpicki, T, Grembecka, J.
Deposit date:2017-12-20
Release date:2018-11-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Complexity of Blocking Bivalent Protein-Protein Interactions: Development of a Highly Potent Inhibitor of the Menin-Mixed-Lineage Leukemia Interaction.
J.Med.Chem., 61, 2018
2B8A
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BU of 2b8a by Molmil
High Resolution Structure of the HDGF PWWP Domain
Descriptor: Hepatoma-derived growth factor
Authors:Lukasik, S.M, Cierpicki, T, Borloz, M, Grembecka, J, Everett, A, Bushweller, J.H.
Deposit date:2005-10-06
Release date:2005-12-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:High resolution structure of the HDGF PWWP domain: a potential DNA binding domain.
Protein Sci., 15, 2006
4WH9
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BU of 4wh9 by Molmil
Structure of the CDC25B Phosphatase Catalytic Domain with Bound Inhibitor
Descriptor: 2-[(2-cyano-3-fluoro-5-hydroxyphenyl)sulfanyl]ethanesulfonic acid, GLYCEROL, M-phase inducer phosphatase 2, ...
Authors:Lund, G.L, Dudkin, S, Borkin, D, Ni, W, Grembecka, J, Cierpicki, T.
Deposit date:2014-09-20
Release date:2014-12-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Inhibition of CDC25B Phosphatase Through Disruption of Protein-Protein Interaction.
Acs Chem.Biol., 10, 2015
4WH7
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BU of 4wh7 by Molmil
Structure of the CDC25B Phosphatase Catalytic Domain with Bound Ligand
Descriptor: 2-fluoro-4-hydroxybenzonitrile, GLYCEROL, M-phase inducer phosphatase 2, ...
Authors:Lund, G.L, Dudkin, S, Borkin, D, Ni, W, Grembecka, J, Cierpicki, T.
Deposit date:2014-09-20
Release date:2014-12-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Inhibition of CDC25B Phosphatase Through Disruption of Protein-Protein Interaction.
Acs Chem.Biol., 10, 2015
4OG8
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BU of 4og8 by Molmil
Human menin with bound inhibitor MIV-6R
Descriptor: 2-PHOSPHOGLYCOLIC ACID, 4-(3-{4-[(R)-amino(cyclopentyl)phenylmethyl]piperidin-1-yl}propoxy)benzonitrile, DIMETHYL SULFOXIDE, ...
Authors:He, S, Senter, T.J, Pollock, J.W, Han, C, Upadhyay, S.K, Purohit, T, Gogliotti, R.D, Lindsley, C.W, Cierpicki, T, Stauffer, S.R, Grembecka, J.
Deposit date:2014-01-15
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:High-Affinity Small-Molecule Inhibitors of the Menin-Mixed Lineage Leukemia (MLL) Interaction Closely Mimic a Natural Protein-Protein Interaction.
J.Med.Chem., 57, 2014
4OG5
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BU of 4og5 by Molmil
Human menin with bound inhibitor MIV-5
Descriptor: 4-(3-{4-[(S)-cyclopentyl(hydroxy)pyridin-2-ylmethyl]piperidin-1-yl}propoxy)benzonitrile, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:He, S, Senter, T.J, Pollock, J.W, Han, C, Upadhyay, S.K, Purohit, T, Gogliotti, R.D, Lindsley, C.W, Cierpicki, T, Stauffer, S.R, Grembecka, J.
Deposit date:2014-01-15
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:High-Affinity Small-Molecule Inhibitors of the Menin-Mixed Lineage Leukemia (MLL) Interaction Closely Mimic a Natural Protein-Protein Interaction.
J.Med.Chem., 57, 2014
4OG4
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BU of 4og4 by Molmil
Human menin with bound inhibitor MIV-3S
Descriptor: 4-(3-{4-[(S)-cyclopentyl(hydroxy)phenylmethyl]piperidin-1-yl}propoxy)benzonitrile, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:He, S, Senter, T.J, Pollock, J.W, Han, C, Upadhyay, S.K, Purohit, T, Gogliotti, R.D, Lindsley, C.W, Cierpicki, T, Stauffer, S.R, Grembecka, J.
Deposit date:2014-01-15
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:High-Affinity Small-Molecule Inhibitors of the Menin-Mixed Lineage Leukemia (MLL) Interaction Closely Mimic a Natural Protein-Protein Interaction.
J.Med.Chem., 57, 2014
4OG3
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BU of 4og3 by Molmil
Human menin with bound inhibitor MIV-3R
Descriptor: 4-(3-{4-[(R)-cyclopentyl(hydroxy)phenylmethyl]piperidin-1-yl}propoxy)benzonitrile, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:He, S, Senter, T.J, Pollock, J.W, Han, C, Upadhyay, S.K, Purohit, T, Gogliotti, R.D, Lindsley, C.W, Cierpicki, T, Stauffer, S.R, Grembecka, J.
Deposit date:2014-01-15
Release date:2014-03-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:High-Affinity Small-Molecule Inhibitors of the Menin-Mixed Lineage Leukemia (MLL) Interaction Closely Mimic a Natural Protein-Protein Interaction.
J.Med.Chem., 57, 2014
4OG6
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BU of 4og6 by Molmil
Human menin with bound inhibitor MIV-4
Descriptor: 4-(3-{4-[(R)-cyclopentyl(3-fluorophenyl)hydroxymethyl]piperidin-1-yl}propoxy)benzonitrile, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:He, S, Senter, T.J, Pollock, J.W, Han, C, Upadhyay, S.K, Purohit, T, Gogliotti, R.D, Lindsley, C.W, Cierpicki, T, Stauffer, S.R, Grembecka, J.
Deposit date:2014-01-15
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:High-Affinity Small-Molecule Inhibitors of the Menin-Mixed Lineage Leukemia (MLL) Interaction Closely Mimic a Natural Protein-Protein Interaction.
J.Med.Chem., 57, 2014
4OG7
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BU of 4og7 by Molmil
Human menin with bound inhibitor MIV-7
Descriptor: 4-(3-{4-[(S)-cyclopentyl(hydroxy)pyridin-2-ylmethyl]piperidin-1-yl}propoxy)benzenesulfonamide, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:He, S, Senter, T.J, Pollock, J.W, Han, C, Upadhyay, S.K, Purohit, T, Gogliotti, R.D, Lindsley, C.W, Cierpicki, T, Stauffer, S.R, Grembecka, J.
Deposit date:2014-01-15
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:High-Affinity Small-Molecule Inhibitors of the Menin-Mixed Lineage Leukemia (MLL) Interaction Closely Mimic a Natural Protein-Protein Interaction.
J.Med.Chem., 57, 2014
6BXY
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BU of 6bxy by Molmil
Menin in complex with MI-1481
Descriptor: 1,2-ETHANEDIOL, 4-methyl-1-{[(2S)-5-oxomorpholin-2-yl]methyl}-5-[(4-{[6-(2,2,2-trifluoroethyl)thieno[2,3-d]pyrimidin-4-yl]amino}piperidin-1-yl)methyl]-1H-indole-2-carbonitrile, DIMETHYL SULFOXIDE, ...
Authors:Borkin, D, Klossowski, S, Pollock, J, Linhares, B, Cierpicki, T, Grembecka, J.
Deposit date:2017-12-19
Release date:2018-11-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Complexity of Blocking Bivalent Protein-Protein Interactions: Development of a Highly Potent Inhibitor of the Menin-Mixed-Lineage Leukemia Interaction.
J.Med.Chem., 61, 2018
1W9E
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BU of 1w9e by Molmil
Crystal structure of the PDZ tandem of human syntenin in complex with TNEFYF peptide
Descriptor: BENZOIC ACID, SYNTENIN 1, TNEFYF PEPTIDE
Authors:Grembecka, J, Cierpicki, T, Devedjiev, Y, Cooper, D.R, Derewenda, U, Derewenda, Z.S.
Deposit date:2004-10-09
Release date:2006-03-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:The Binding of the Pdz Tandem of Syntenin to Target Proteins.
Biochemistry, 45, 2006
1W9O
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BU of 1w9o by Molmil
Crystal structure of the PDZ tandem of human syntenin in complex with TNEYYV peptide
Descriptor: BENZOIC ACID, SYNTENIN 1, TNEYYV PEPTIDE
Authors:Grembecka, J, Cierpicki, T, Devedjiev, Y, Cooper, D.R, Derewenda, U, Derewenda, Z.S.
Deposit date:2004-10-15
Release date:2006-03-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Binding of the Pdz Tandem of Syntenin to Target Proteins.
Biochemistry, 45, 2006
1YBO
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BU of 1ybo by Molmil
Crystal structure of the PDZ tandem of human syntenin with syndecan peptide
Descriptor: Syndecan-4, Syntenin 1
Authors:Grembecka, J, Cooper, D.R, Cierpicki, T, Kang, B.S, Devedjiev, Y, Derewenda, Z.
Deposit date:2004-12-21
Release date:2006-01-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The binding of the PDZ tandem of syntenin to target proteins
Biochemistry, 45, 2006
5DB0
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BU of 5db0 by Molmil
Menin in complex with MI-352
Descriptor: 1-[(2R)-2,3-dihydroxypropyl]-5-[(4-{[6-(2,2,2-trifluoroethyl)thieno[2,3-d]pyrimidin-4-yl]amino}piperidin-1-yl)methyl]-1H-indole-2-carbonitrile, 1-[(2S)-2,3-dihydroxypropyl]-5-[(4-{[6-(2,2,2-trifluoroethyl)thieno[2,3-d]pyrimidin-4-yl]amino}piperidin-1-yl)methyl]-1 H-indole-2-carbonitrile, DIMETHYL SULFOXIDE, ...
Authors:Pollock, J, Dmitry, B, Cierpicki, T, Grembecka, J.
Deposit date:2015-08-20
Release date:2016-03-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Property Focused Structure-Based Optimization of Small Molecule Inhibitors of the Protein-Protein Interaction between Menin and Mixed Lineage Leukemia (MLL).
J.Med.Chem., 59, 2016
5DB3
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BU of 5db3 by Molmil
Menin in complex with MI-574
Descriptor: 6-methoxy-4-methyl-1-(1H-pyrazol-4-ylmethyl)-5-[(4-{[6-(2,2,2-trifluoroethyl)thieno[2,3-d]pyrimidin-4-yl]amino}piperidin-1-yl)methyl]-1H-indole-2-carbonitrile, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Pollock, J, Borkin, D, Cierpicki, T, Grembecka, J.
Deposit date:2015-08-20
Release date:2016-03-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Property Focused Structure-Based Optimization of Small Molecule Inhibitors of the Protein-Protein Interaction between Menin and Mixed Lineage Leukemia (MLL).
J.Med.Chem., 59, 2016
6CQ1
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BU of 6cq1 by Molmil
BCL6 BTB domain in complex with 15a
Descriptor: 2-{6-({[2-(1H-indol-3-yl)ethyl]carbamothioyl}amino)-3-[(4-methylpiperazin-1-yl)methyl]-1H-indol-1-yl}-N-(propan-2-yl)acetamide, B-cell lymphoma 6 protein
Authors:Linhares, B.M, Cheng, H, Xue, F, Cierpicki, T.
Deposit date:2018-03-14
Release date:2019-03-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.69921041 Å)
Cite:Identification of Thiourea-Based Inhibitors of the B-Cell Lymphoma 6 BTB Domain via NMR-Based Fragment Screening and Computer-Aided Drug Design.
J.Med.Chem., 61, 2018

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