Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 155 件

4MG2
DownloadVisualize
BU of 4mg2 by Molmil
ALKBH2 F102A cross-linked to undamaged dsDNA
分子名称: Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, DNA-1, DNA-2, ...
著者Chen, B, Gan, J, Yang, C.G.
登録日2013-08-28
公開日2014-02-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The complex structures of ALKBH2 mutants cross-linked to dsDNA reveal the conformational swing of β-hairpin
Sci China Chem, 57, 2014
8YY8
DownloadVisualize
BU of 8yy8 by Molmil
Fzd7 -Gs complex
分子名称: Frizzled-7, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Chen, B, Xu, L, Han, G.W, Xu, F.
登録日2024-04-03
公開日2024-04-24
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Cryo-EM structure of constitutively active human Frizzled 7 in complex with heterotrimeric G s .
Cell Res., 31, 2021
9AU7
DownloadVisualize
BU of 9au7 by Molmil
Human Retriever VPS35L/VPS29/VPS26C complex bound to SNX17 peptide (Composite Map)
分子名称: Sorting nexin-17, VPS35 endosomal protein-sorting factor-like, Vacuolar protein sorting-associated protein 26C, ...
著者Chen, B, Chen, Z, Han, Y, Boesch, D.J, Juneja, P, Burstein, E, Fung, H.Y.J.
登録日2024-02-28
公開日2024-10-30
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for Retriever-SNX17 assembly and endosomal sorting
To be published
1ZA8
DownloadVisualize
BU of 1za8 by Molmil
NMR solution structure of a leaf-specific-expressed cyclotide vhl-1
分子名称: vhl-1
著者Chen, B, Colgrave, M.L, Daly, N.L, Rosengren, K.J, Gustafson, K.R, Craik, D.J.
登録日2005-04-05
公開日2005-04-12
最終更新日2024-10-23
実験手法SOLUTION NMR
主引用文献Isolation and characterization of novel cyclotides from Viola hederaceae: solution structure and anti-HIV activity of vhl-1, a leaf-specific expressed cyclotide.
J.Biol.Chem., 280, 2005
4UMK
DownloadVisualize
BU of 4umk by Molmil
The complex of Spo0J and parS DNA in chromosomal partition system
分子名称: DNA, PROBABLE CHROMOSOME-PARTITIONING PROTEIN PARB, SULFATE ION
著者Chen, B.W, Chu, C.H, Tung, J.Y, Hsu, C.E, Hsiao, C.D, Sun, Y.J.
登録日2014-05-19
公開日2015-05-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.096 Å)
主引用文献Insights into ParB spreading from the complex structure of Spo0J and parS.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
2L0K
DownloadVisualize
BU of 2l0k by Molmil
NMR solution structure of a transcription factor SpoIIID in complex with DNA
分子名称: Stage III sporulation protein D
著者Chen, B, Himes, P, Lu, Z, Liu, A, Yan, H, Kroos, L.
登録日2010-07-08
公開日2011-08-17
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Novel Mode of DNA Binding by Bacterial Transcription Factor SpoIIID
To be Published
7Y1F
DownloadVisualize
BU of 7y1f by Molmil
Cryo-EM structure of human k-opioid receptor-Gi complex
分子名称: Dynorphin, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Chen, B.O, Xu, F.E.
登録日2022-06-08
公開日2023-05-24
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structure of human kappa-opioid receptor-Gi complex bound to an endogenous agonist dynorphin A.
Protein Cell, 14, 2023
2BF1
DownloadVisualize
BU of 2bf1 by Molmil
Structure of an unliganded and fully-glycosylated SIV gp120 envelope glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Chen, B, Vogan, E.M, Gong, H, Skehel, J.J, Wiley, D.C, Harrison, S.C.
登録日2004-12-02
公開日2005-02-17
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structure of an Unliganded Simian Immunodeficiency Virus Gp120 Core
Nature, 433, 2005
4MGT
DownloadVisualize
BU of 4mgt by Molmil
ALKBH2 R110A cross-linked to undamaged dsDNA
分子名称: Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, DNA1, DNA2, ...
著者Chen, B, Gan, J, Yang, C.G.
登録日2013-08-28
公開日2014-02-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The complex structures of ALKBH2 mutants cross-linked to dsDNA reveal the conformational swing of β-hairpin
Sci China Chem, 57, 2014
3M0E
DownloadVisualize
BU of 3m0e by Molmil
Crystal structure of the ATP-bound state of Walker B mutant of NtrC1 ATPase domain
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Transcriptional regulator (NtrC family)
著者Chen, B, Sysoeva, T.A, Chowdhury, S, Rusu, M, Birmanns, S, Guo, L, Hanson, J, Yang, H, Nixon, B.T.
登録日2010-03-02
公開日2010-11-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Engagement of Arginine Finger to ATP Triggers Large Conformational Changes in NtrC1 AAA+ ATPase for Remodeling Bacterial RNA Polymerase.
Structure, 18, 2010
3RBT
DownloadVisualize
BU of 3rbt by Molmil
Crystal structure of glutathione S-transferase Omega 3 from the silkworm Bombyx mori
分子名称: GLYCEROL, Glutathione transferase o1
著者Chen, B.-Y, Ma, X.-X, Tan, X, Yang, J.-P, Zhang, N.-N, Li, W.-F, Chen, Y, Xia, Q, Zhou, C.-Z.
登録日2011-03-29
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-guided activity restoration of the silkworm glutathione transferase Omega GSTO3-3
J.Mol.Biol., 412, 2011
8WND
DownloadVisualize
BU of 8wnd by Molmil
Crystal structure of Saccharomyces cerevisiae isoleucyl-tRNA synthetase in complex with tRNA(Ile) and isoleucine
分子名称: 1,2-ETHANEDIOL, ISOLEUCINE, SULFATE ION, ...
著者Chen, B, Yi, F, Zhou, H.
登録日2023-10-05
公開日2024-10-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The eukaryote-specific mechanism for isoleucyl-tRNA synthetase achieving necessary tRNA discrimination
To Be Published
8HJ2
DownloadVisualize
BU of 8hj2 by Molmil
GPR21 wt with G15 complex
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Chen, B, Lin, X, Xu, F.
登録日2022-11-22
公開日2023-03-15
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM structures of orphan GPR21 signaling complexes.
Nat Commun, 14, 2023
8HIX
DownloadVisualize
BU of 8hix by Molmil
Cryo-EM structure of GPR21_m5_Gs
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Chen, B, Lin, X, Xu, F.
登録日2022-11-22
公開日2023-03-15
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Cryo-EM structures of orphan GPR21 signaling complexes.
Nat Commun, 14, 2023
8HJ0
DownloadVisualize
BU of 8hj0 by Molmil
GPR21(m5) and G15 complex
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Chen, B, Lin, X.
登録日2022-11-22
公開日2023-03-15
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Cryo-EM structures of orphan GPR21 signaling complexes.
Nat Commun, 14, 2023
8HJ1
DownloadVisualize
BU of 8hj1 by Molmil
GPR21(wt) and Gs complex
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Chen, B, Lin, X, Xu, F.
登録日2022-11-22
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献Cryo-EM structures of orphan GPR21 signaling complexes.
Nat Commun, 14, 2023
8HMP
DownloadVisualize
BU of 8hmp by Molmil
GPR52 with Gs and c17
分子名称: G-protein coupled receptor 52, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Chen, B, Xu, F.
登録日2022-12-05
公開日2023-06-21
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Allosteric coupling between G-protein binding and extracellular ligand binding sites in GPR52 revealed by 19 F-NMR and cryo-electron microscopy.
MedComm (2020), 4, 2023
5YHU
DownloadVisualize
BU of 5yhu by Molmil
Crystal structure of the DNA-binding domain of human myelin-gene regulatory factor
分子名称: Myelin regulatory factor
著者Chen, B, Zhu, Y, Ye, S, Zhang, R.
登録日2017-09-30
公開日2018-05-23
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of the DNA-binding domain of human myelin-gene regulatory factor reveals its potential protein-DNA recognition mode.
J. Struct. Biol., 203, 2018
5ZHU
DownloadVisualize
BU of 5zhu by Molmil
Crystal structure of the DNA-binding domain of human myelin-gene regulatory factor
分子名称: Myelin regulatory factor
著者Chen, B, Zhu, Y, Ye, S, Zhang, R.
登録日2018-03-13
公開日2018-05-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Structure of the DNA-binding domain of human myelin-gene regulatory factor reveals its potential protein-DNA recognition mode.
J. Struct. Biol., 203, 2018
7UBX
DownloadVisualize
BU of 7ubx by Molmil
Structure of a pore forming fragment of Clostridium difficile toxin A in complex with VHH AA6
分子名称: Nanobody VHH AA6, Toxin A
著者Chen, B, Rongsheng, J, Kay, P.
登録日2022-03-15
公開日2022-11-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Neutralizing epitopes on Clostridioides difficile toxin A revealed by the structures of two camelid VHH antibodies.
Front Immunol, 13, 2022
7UBY
DownloadVisualize
BU of 7uby by Molmil
Structure of the GTD domain of Clostridium difficile toxin A in complex with VHH AH3
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Glucosyltransferase TcdA, ...
著者Chen, B, Rongsheng, J, Kay, P.
登録日2022-03-15
公開日2022-11-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Neutralizing epitopes on Clostridioides difficile toxin A revealed by the structures of two camelid VHH antibodies.
Front Immunol, 13, 2022
7D5C
DownloadVisualize
BU of 7d5c by Molmil
IleRS in complex with a tRNA site inhibitor
分子名称: (2E,4S,5S,6E,8E)-10-[(2S,3R,6S,8R,9S)-3-butyl-9-methyl-2-[(1E,3E)-3-methyl-5-oxidanyl-5-oxidanylidene-penta-1,3-dienyl]-3-(4-oxidanyl-4-oxidanylidene-butanoyl)oxy-1,7-dioxaspiro[5.5]undecan-8-yl]-4,8-dimethyl-5-oxidanyl-deca-2,6,8-trienoic acid, 1,2-ETHANEDIOL, Isoleucine--tRNA ligase, ...
著者Chen, B, Luo, S, Zhou, H.
登録日2020-09-25
公開日2021-02-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.895 Å)
主引用文献Inhibitory mechanism of reveromycin A at the tRNA binding site of a class I synthetase.
Nat Commun, 12, 2021
5ZNK
DownloadVisualize
BU of 5znk by Molmil
Crystal structure of a bacterial ProRS with ligands
分子名称: 7-chloro-6-fluoro-3-{2-oxo-3-[(2S)-piperidin-2-yl]propyl}quinazolin-4(3H)-one, GLYCEROL, MAGNESIUM ION, ...
著者Cheng, B, Yu, Y, Zhou, H.
登録日2018-04-09
公開日2019-05-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structure-Guided Design of Halofuginone Derivatives as ATP-Aided Inhibitors Against Bacterial Prolyl-tRNA Synthetase.
J.Med.Chem., 65, 2022
5ZNJ
DownloadVisualize
BU of 5znj by Molmil
Crystal structure of a bacterial ProRS with ligands
分子名称: 7-bromo-6-chloro-3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one, GLYCEROL, MAGNESIUM ION, ...
著者Cheng, B, Yu, Y, Zhou, H.
登録日2018-04-09
公開日2019-05-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structure-Guided Design of Halofuginone Derivatives as ATP-Aided Inhibitors Against Bacterial Prolyl-tRNA Synthetase.
J.Med.Chem., 65, 2022
5ZAN
DownloadVisualize
BU of 5zan by Molmil
Crystal Structure of Aurora-A in complex with a new Quinazoline inhibitor
分子名称: 7-(4-methylpiperazin-1-yl)-N-(5-methyl-1H-pyrazol-3-yl)-2-[(E)-2-phenylethenyl]quinazolin-4-amine, Aurora kinase A
著者Cheng, B, Lu, G, Zhou, H.
登録日2018-02-07
公開日2019-02-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Optimization of Novel Quinazolines as Potent and Orally Bioavailable Aurora Kinase Inhibitors
To Be Published

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon