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PDB: 52 results

6XNU
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CRYSTAL STRUCTURE OF CBPB PROTEIN (LMO1009) FROM LISTERIA MONOCYTOGENES
Descriptor: CBS domain-containing protein, CHLORIDE ION
Authors:Luo, S, Tong, L.
Deposit date:2020-07-04
Release date:2020-09-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:(p)ppGpp and c-di-AMP Homeostasis Is Controlled by CbpB in Listeria monocytogenes.
Mbio, 11, 2020
6XNV
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CRYSTAL STRUCTURE OF LISTERIA MONOCYTOGENES CBPB PROTEIN (LMO1009) IN COMPLEX WITH C-DI-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, CBS domain-containing protein
Authors:Luo, S, Tong, L.
Deposit date:2020-07-04
Release date:2020-09-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:(p)ppGpp and c-di-AMP Homeostasis Is Controlled by CbpB in Listeria monocytogenes.
Mbio, 11, 2020
4S3H
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BU of 4s3h by Molmil
Crystal structure of S. pombe Mdb1 FHA domain
Descriptor: Mdb1, SULFATE ION
Authors:Luo, S, Ye, K.
Deposit date:2015-01-26
Release date:2015-07-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Dimerization Mediated by a Divergent Forkhead-associated Domain Is Essential for the DNA Damage and Spindle Functions of Fission Yeast Mdb1.
J.Biol.Chem., 290, 2015
4U8T
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Crystal structure of YTH domain of Zygosaccharomyces rouxii MRB1 protein in complex with N6-Methyladenosine RNA
Descriptor: RNA (5'-R(*AP*GP*GP*(6MZ)P*CP*AP*U)-3'), ZYRO0G01672p
Authors:Luo, S, Tong, L.
Deposit date:2014-08-04
Release date:2014-09-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis for the recognition of methylated adenines in RNA by the eukaryotic YTH domain.
Proc.Natl.Acad.Sci.USA, 111, 2014
4S1C
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BU of 4s1c by Molmil
Crystal Structure of L. monocytogenes phosphodiesterase PgpH HD domain
Descriptor: FE (III) ION, Lmo1466 protein
Authors:Luo, S, Tong, L.
Deposit date:2015-01-12
Release date:2015-02-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.398 Å)
Cite:An HD-domain phosphodiesterase mediates cooperative hydrolysis of c-di-AMP to affect bacterial growth and virulence.
Proc.Natl.Acad.Sci.USA, 112, 2015
4S1B
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BU of 4s1b by Molmil
Crystal Structure of L. monocytogenes phosphodiesterase PgpH HD domain in complex with Cyclic-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, FE (III) ION, Lmo1466 protein
Authors:Luo, S, Tong, L.
Deposit date:2015-01-12
Release date:2015-02-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:An HD-domain phosphodiesterase mediates cooperative hydrolysis of c-di-AMP to affect bacterial growth and virulence.
Proc.Natl.Acad.Sci.USA, 112, 2015
4JDE
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BU of 4jde by Molmil
Crystal structure of PUD-1/PUD-2 heterodimer
Descriptor: CHLORIDE ION, GLYCEROL, Protein F15E11.1, ...
Authors:Luo, S, Ye, K.
Deposit date:2013-02-25
Release date:2013-11-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of PUD-1 and PUD-2, two proteins up-regulated in a long-lived daf-2 mutant.
Plos One, 8, 2013
6E42
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CRYSTAL STRUCTURE OF HUMAN INDOLEAMINE 2,3-DIOXYGENASE 1 (IDO1) in complex with ferric heme and 4-Chlorophenyl imidazole
Descriptor: 4-(3-chlorophenyl)-1H-imidazole, Indoleamine 2,3-dioxygenase 1, PHOSPHATE ION, ...
Authors:Luo, S, Tong, L.
Deposit date:2018-07-16
Release date:2018-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:High-resolution structures of inhibitor complexes of human indoleamine 2,3-dioxygenase 1 in a new crystal form.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6E45
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CRYSTAL STRUCTURE OF HUMAN INDOLEAMINE 2,3-DIOXYGENASE 1 (IDO1) free enzyme in the ferrous state
Descriptor: GLYCEROL, Indoleamine 2,3-dioxygenase 1, PHOSPHATE ION, ...
Authors:Luo, S, Tong, L.
Deposit date:2018-07-16
Release date:2018-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-resolution structures of inhibitor complexes of human indoleamine 2,3-dioxygenase 1 in a new crystal form.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6E40
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Crystal structure of the indoleamine 2,3-dioxygenase 1 (IDO1) in complexed with ferric heme and Epacadostat
Descriptor: Indoleamine 2,3-dioxygenase 1, N-(3-bromo-4-fluorophenyl)-N'-hydroxy-4-{[2-(sulfamoylamino)ethyl]amino}-1,2,5-oxadiazole-3-carboximidamide, PROTOPORPHYRIN IX CONTAINING FE
Authors:Luo, S, Tong, L.
Deposit date:2018-07-16
Release date:2018-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.306 Å)
Cite:High-resolution structures of inhibitor complexes of human indoleamine 2,3-dioxygenase 1 in a new crystal form.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6E41
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CRYSTAL STRUCTURE OF HUMAN INDOLEAMINE 2,3-DIOXYGENASE 1 (IDO1) in complex with ferric heme and an Epacadostat analog
Descriptor: Indoleamine 2,3-dioxygenase 1, N-(3-bromo-4-fluorophenyl)-N'-hydroxy-4-{[2-(sulfamoylamino)ethyl]sulfanyl}-1,2,5-oxadiazole-3-carboximidamide, PROTOPORPHYRIN IX CONTAINING FE
Authors:Luo, S, Tong, L.
Deposit date:2018-07-16
Release date:2018-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.291 Å)
Cite:High-resolution structures of inhibitor complexes of human indoleamine 2,3-dioxygenase 1 in a new crystal form.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6E43
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Crystal structure of human indoleamine 2,3-dioxygenase 1 (IDO1) in complex with a BMS-978587 analog
Descriptor: (1R,2S)-2-(4-[cyclohexyl(2-methylpropyl)amino]-3-{[(4-methylphenyl)carbamoyl]amino}phenyl)cyclopropane-1-carboxylic acid, BENZOIC ACID, Indoleamine 2,3-dioxygenase 1
Authors:Luo, S, Tong, L.
Deposit date:2018-07-16
Release date:2018-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.705 Å)
Cite:High-resolution structures of inhibitor complexes of human indoleamine 2,3-dioxygenase 1 in a new crystal form.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6E44
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BU of 6e44 by Molmil
CRYSTAL STRUCTURE OF HUMAN INDOLEAMINE 2,3-DIOXYGENASE 1 (IDO1) free enzyme in the ferric state
Descriptor: Indoleamine 2,3-dioxygenase 1, PHOSPHATE ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Luo, S, Tong, L.
Deposit date:2018-07-16
Release date:2018-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:High-resolution structures of inhibitor complexes of human indoleamine 2,3-dioxygenase 1 in a new crystal form.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6E46
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BU of 6e46 by Molmil
CRYSTAL STRUCTURE OF HUMAN INDOLEAMINE 2,3-DIOXYGENASE 1 (IDO1) in complex with ferrous heme and tryptophan
Descriptor: Indoleamine 2,3-dioxygenase 1, PHOSPHATE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Luo, S, Tong, L.
Deposit date:2018-07-16
Release date:2018-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:High-resolution structures of inhibitor complexes of human indoleamine 2,3-dioxygenase 1 in a new crystal form.
Acta Crystallogr F Struct Biol Commun, 74, 2018
8IS2
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BU of 8is2 by Molmil
Crystal structure of a polyketide aromatase/cyclase Abx(+)D from Actinomycetes sp. MA7150.
Descriptor: Cyclase
Authors:Luo, S, Chen, X.
Deposit date:2023-03-20
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:An unusual aromatase/cyclase programs the formation of the phenyldimethylanthrone framework in anthrabenzoxocinones and fasamycin.
Proc.Natl.Acad.Sci.USA, 121, 2024
7KZ9
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Crystal structure of Pseudomonas sp. PDC86 substrate-binding protein Aapf in complex with a signaling molecule HEHEAA
Descriptor: GLYCEROL, N,N~2~-bis(2-hydroxyethyl)glycinamide, Peptide/nickel transport system substrate-binding protein AapF, ...
Authors:Luo, S, Dadhwal, P, Tong, L.
Deposit date:2020-12-10
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for a bacterial Pip system plant effector recognition protein.
Proc.Natl.Acad.Sci.USA, 118, 2021
7KZ8
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BU of 7kz8 by Molmil
Crystal structure of substrate-binding protein Aapf from Pseudomonas sp. PDC86
Descriptor: GLYCEROL, Peptide/nickel transport system substrate-binding protein AapF
Authors:Luo, S, Dadhwal, P, Tong, L.
Deposit date:2020-12-10
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for a bacterial Pip system plant effector recognition protein.
Proc.Natl.Acad.Sci.USA, 118, 2021
3UMZ
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BU of 3umz by Molmil
Crystal Structure of the human MDC1 FHA Domain
Descriptor: Mediator of DNA damage checkpoint protein 1
Authors:Luo, S, Ye, K.
Deposit date:2011-11-15
Release date:2012-01-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural mechanism of the phosphorylation-dependent dimerization of the MDC1 forkhead-associated domain
Nucleic Acids Res., 40, 2012
3UNM
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BU of 3unm by Molmil
Crystal Structure of The Human MDC1 FHA Domain
Descriptor: Mediator of DNA damage checkpoint protein 1
Authors:Luo, S, Ye, K.
Deposit date:2011-11-16
Release date:2012-01-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural mechanism of the phosphorylation-dependent dimerization of the MDC1 forkhead-associated domain
Nucleic Acids Res., 40, 2012
3UV0
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BU of 3uv0 by Molmil
Crystal structure of the drosophila MU2 FHA domain
Descriptor: Mutator 2, isoform B
Authors:Luo, S, Ye, K.
Deposit date:2011-11-29
Release date:2012-01-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Dimerization, but not phosphothreonine binding, is conserved between the forkhead-associated domains of Drosophila MU2 and human MDC1
Febs Lett., 586, 2012
3UNN
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BU of 3unn by Molmil
Monomeric structure of the human MDC1 FHA domain in complex with an MDC1 phospho-T4 peptide
Descriptor: Mediator of DNA damage checkpoint protein 1, phospho-T4 peptide from Mediator of DNA damage checkpoint protein 1
Authors:Luo, S, Ye, K.
Deposit date:2011-11-16
Release date:2012-01-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural mechanism of the phosphorylation-dependent dimerization of the MDC1 forkhead-associated domain
Nucleic Acids Res., 40, 2012
5UC8
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BU of 5uc8 by Molmil
Crystal structure of human Heme Oxygenase-2
Descriptor: Heme oxygenase 2
Authors:Luo, S, Tong, L.
Deposit date:2016-12-22
Release date:2017-02-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Heme Oxygenase 2 Binds Myristate to Regulate Retrovirus Assembly and TLR4 Signaling.
Cell Host Microbe, 21, 2017
5UC9
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BU of 5uc9 by Molmil
Crystal structure of human Heme Oxygenase-2 in complex with Myristate
Descriptor: Heme oxygenase 2, MYRISTIC ACID
Authors:Luo, S, Tong, L.
Deposit date:2016-12-22
Release date:2017-02-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Heme Oxygenase 2 Binds Myristate to Regulate Retrovirus Assembly and TLR4 Signaling.
Cell Host Microbe, 21, 2017
5UCA
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BU of 5uca by Molmil
Crystal structure of human Heme Oxygenase-2 in complex with Laurate
Descriptor: Heme oxygenase 2, LAURIC ACID
Authors:Luo, S, Tong, L.
Deposit date:2016-12-22
Release date:2017-02-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.117 Å)
Cite:Heme Oxygenase 2 Binds Myristate to Regulate Retrovirus Assembly and TLR4 Signaling.
Cell Host Microbe, 21, 2017
5U1T
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Crystal structure of the Saccharomyces cerevisiae separase-securin complex at 2.6 angstrom resolution
Descriptor: Securin, Separin
Authors:Luo, S, Tong, L.
Deposit date:2016-11-29
Release date:2017-02-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular mechanism for the regulation of yeast separase by securin.
Nature, 542, 2017

 

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