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PDB: 123 results

2QMK
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Human pancreatic alpha-amylase complexed with nitrite
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, NITRITE ION, ...
Authors:Williams, L.K, Maurus, R, Brayer, G.D.
Deposit date:2007-07-16
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Alternative catalytic anions differentially modulate human alpha-amylase activity and specificity
Biochemistry, 47, 2008
4G6B
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Three dimensional structure analysis of the type II citrate synthase from e.coli
Descriptor: Citrate synthase, SULFATE ION
Authors:Nguyen, N.T, Maurus, R, Stokell, D.J, Ayed, A, Duckworth, H.W, Brayer, G.D.
Deposit date:2012-07-18
Release date:2013-11-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Comparative Analysis of Folding and Substrate Binding Sites between Regulated Hexameric Type II Citrate Synthases and Unregulated Dimeric Type I Enzymes.
Biochemistry, 40, 2001
3IJ8
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Directed 'in situ' Elongation as a Strategy to Characterize the Covalent Glycosyl-Enzyme Catalytic Intermediate of Human Pancreatic a-Amylase
Descriptor: (2R,3S,4R,5R,6R)-2,6-difluoro-2-(hydroxymethyl)tetrahydro-2H-pyran-3,4,5-triol, 5-fluoro-alpha-L-idopyranose, CALCIUM ION, ...
Authors:Li, C, Zhang, R, Withers, S.G, Brayer, G.D.
Deposit date:2009-08-04
Release date:2009-10-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Directed "in situ" inhibitor elongation as a strategy to structurally characterize the covalent glycosyl-enzyme intermediate of human pancreatic alpha-amylase
Biochemistry, 48, 2009
4YV8
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Crystal structure of cathepsin K bound to the covalent inhibitor lichostatinal
Descriptor: Cathepsin K, Lichostatinal, SULFATE ION
Authors:Aguda, A.H, Nguyen, N.T, Bromme, D, Brayer, G.D.
Deposit date:2015-03-19
Release date:2016-05-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Affinity Crystallography: A New Approach to Extracting High-Affinity Enzyme Inhibitors from Natural Extracts.
J.Nat.Prod., 79, 2016
4X0N
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BU of 4x0n by Molmil
Porcine pancreatic alpha-amylase in complex with helianthamide, a novel proteinaceous inhibitor
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Williams, L.K, Brayer, G.D.
Deposit date:2014-11-21
Release date:2015-11-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6001 Å)
Cite:Structural Templating and Guided Refolding of the Potent Naturally Occurring Peptide Helianthamide Within the Active Site of Amylase, a Diabetes and Obesity Therapeutic Target
To Be Published
2QV4
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Human pancreatic alpha-amylase complexed with nitrite and acarbose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4,6-dideoxy-4-{[(1S,4R,5R,6S)-4-{[alpha-D-glucopyranosyl-(1->4)-alpha-D-glucopyranosyl-(1->4)-alpha-D-glucopyranosyl]oxy}-5,6-dihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose, CALCIUM ION, ...
Authors:Williams, L.K, Maurus, R, Brayer, G.D.
Deposit date:2007-08-07
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Alternative catalytic anions differentially modulate human alpha-amylase activity and specificity
Biochemistry, 47, 2008
5T6U
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BU of 5t6u by Molmil
Crystal structure of mouse cathepsin K at 2.9 Angstroms resolution.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cathepsin K, SULFATE ION
Authors:Law, S, Aguda, A, Nguyen, N, Brayer, G, Bromme, D.
Deposit date:2016-09-01
Release date:2017-01-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Identification of mouse cathepsin K structural elements that regulate the potency of odanacatib.
Biochem. J., 474, 2017
5TDI
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Crystal structure of Cathepsin K with a covalently-linked inhibitor at 1.4 Angstrom resolution.
Descriptor: 4-fluoro-N-{1-[(Z)-iminomethyl]cyclopropyl}-N~2~-{(1S)-2,2,2-trifluoro-1-[4'-(methylsulfonyl)[1,1'-biphenyl]-4-yl]ethyl }-L-leucinamide, Cathepsin K
Authors:Law, S, Aguda, A, Nguyen, N, Brayer, G, Bromme, D.
Deposit date:2016-09-19
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Identification of mouse cathepsin K structural elements that regulate the potency of odanacatib.
Biochem. J., 474, 2017
3IJ9
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Directed 'in situ' Elongation as a Strategy to Characterize the Covalent Glycosyl-Enzyme Catalytic Intermediate of Human Pancreatic a-Amylase
Descriptor: (2R,3S,4R,5R,6R)-2,6-difluoro-2-(hydroxymethyl)tetrahydro-2H-pyran-3,4,5-triol, CALCIUM ION, CHLORIDE ION, ...
Authors:Li, C, Zhang, R, Withers, S.G, Brayer, G.D.
Deposit date:2009-08-04
Release date:2009-10-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Directed "in situ" inhibitor elongation as a strategy to structurally characterize the covalent glycosyl-enzyme intermediate of human pancreatic alpha-amylase
Biochemistry, 48, 2009
1WLA
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MYOGLOBIN (HORSE HEART) RECOMBINANT WILD-TYPE
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Maurus, R, Brayer, G.D.
Deposit date:1997-09-24
Release date:1998-01-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A myoglobin variant with a polar substitution in a conserved hydrophobic cluster in the heme binding pocket.
Biochim.Biophys.Acta, 1341, 1997
4YVA
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Cathepsin K co-crystallized with actinomycetes extract
Descriptor: Cathepsin K, SULFATE ION
Authors:Aguda, A.H, Nguyen, N.T, Bromme, D, Brayer, G.D.
Deposit date:2015-03-19
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Affinity Crystallography: A New Approach to Extracting High-Affinity Enzyme Inhibitors from Natural Extracts.
J.Nat.Prod., 79, 2016
1XCH
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BU of 1xch by Molmil
MYOGLOBIN (HORSE HEART) MUTANT WITH LEU 104 REPLACED BY ASN (L104N)
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Maurus, R, Brayer, G.D.
Deposit date:1997-06-06
Release date:1997-09-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A myoglobin variant with a polar substitution in a conserved hydrophobic cluster in the heme binding pocket.
Biochim.Biophys.Acta, 1341, 1997
5TUN
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BU of 5tun by Molmil
Crystal structure of uninhibited human Cathepsin K at 1.62 Angstrom resolution
Descriptor: Cathepsin K
Authors:Aguda, A.H, Kruglyak, N, Nguyen, N.T, Law, S, Bromme, D, Brayer, G.D.
Deposit date:2016-11-06
Release date:2017-01-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Identification of mouse cathepsin K structural elements that regulate the potency of odanacatib.
Biochem. J., 474, 2017
3IJ7
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BU of 3ij7 by Molmil
Directed 'in situ' Elongation as a Strategy to Characterize the Covalent Glycosyl-Enzyme Catalytic Intermediate of Human Pancreatic a-Amylase
Descriptor: 4-O-methyl-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranosyl fluoride, 4-O-methyl-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-2)-5-fluoro-alpha-L-idopyranose, CALCIUM ION, ...
Authors:Li, C, Zhang, R, Withers, S.G, Brayer, G.D.
Deposit date:2009-08-03
Release date:2009-10-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Directed "in situ" inhibitor elongation as a strategy to structurally characterize the covalent glycosyl-enzyme intermediate of human pancreatic alpha-amylase
Biochemistry, 48, 2009
5U3A
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BU of 5u3a by Molmil
Ultra High Resolution Crystal Structure of Human Pancreatic Alpha Amylase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
Authors:Caner, S, Brayer, G.D.
Deposit date:2016-12-01
Release date:2017-12-06
Last modified:2022-04-27
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Folding Then Binding vs Folding Through Binding in Macrocyclic Peptide Inhibitors of Human Pancreatic alpha-Amylase.
Acs Chem.Biol., 14, 2019
5TD4
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BU of 5td4 by Molmil
Starch binding sites on the Human pancreatic alpha amylase D300N variant complexed with an octaose substrate.
Descriptor: CALCIUM ION, CHLORIDE ION, Pancreatic alpha-amylase, ...
Authors:Caner, S, Brayer, G.D.
Deposit date:2016-09-16
Release date:2016-11-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evaluation of the Significance of Starch Surface Binding Sites on Human Pancreatic alpha-Amylase.
Biochemistry, 55, 2016
1RAQ
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BU of 1raq by Molmil
THE STRUCTURE AND FUNCTION OF OMEGA LOOP A REPLACEMENTS IN CYTOCHROME C
Descriptor: HEME C, REP A2 ISO-1-CYTOCHROME C, SULFATE ION
Authors:Murphy, M.E.P, Brayer, G.D.
Deposit date:1992-08-25
Release date:1993-10-31
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure and function of omega loop A replacements in cytochrome c.
Protein Sci., 2, 1993
1RAP
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BU of 1rap by Molmil
THE STRUCTURE AND FUNCTION OF OMEGA LOOP A REPLACEMENTS IN CYTOCHROME C
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, REP A2 ISO-1-CYTOCHROME C, SULFATE ION
Authors:Murphy, M.E.P, Brayer, G.D.
Deposit date:1992-08-25
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The structure and function of omega loop A replacements in cytochrome c.
Protein Sci., 2, 1993
4JAG
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BU of 4jag by Molmil
STRUCTURAL DETERMINATION OF THE A50T:S279G:S280K:V281K:K282E:H283N VARIANT OF CITRATE SYNTHASE FROM E. COLI COMPLEXED WITH oxaloacetate
Descriptor: Citrate synthase, OXALOACETATE ION, SULFATE ION
Authors:Maurus, R, Brayer, G.D.
Deposit date:2013-02-18
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Enzyme-substrate complexes of allosteric citrate synthase: Evidence for a novel intermediate in substrate binding.
Biochim.Biophys.Acta, 1834, 2013
4JAD
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BU of 4jad by Molmil
STRUCTURAL DETERMINATION OF THE A50T:S279G:S280K:V281K:K282E:H283N VARIANT OF CITRATE SYNTHASE from E. COLI
Descriptor: Citrate synthase, SULFATE ION
Authors:Maurus, R, Brayer, G.D.
Deposit date:2013-02-18
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Enzyme-substrate complexes of allosteric citrate synthase: Evidence for a novel intermediate in substrate binding.
Biochim.Biophys.Acta, 1834, 2013
4JAE
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BU of 4jae by Molmil
STRUCTURAL DETERMINATION OF THE A50T:S279G:S280K:V281K:K282E:H283N VARIANT OF CITRATE SYNTHASE FROM E. COLI complexed WITH S-CARBOXYMETHYL-COA
Descriptor: CARBOXYMETHYL COENZYME *A, Citrate synthase, SULFATE ION
Authors:Maurus, R, Brayer, G.D.
Deposit date:2013-02-18
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Enzyme-substrate complexes of allosteric citrate synthase: Evidence for a novel intermediate in substrate binding.
Biochim.Biophys.Acta, 1834, 2013
4JAF
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BU of 4jaf by Molmil
STRUCTURAL DETERMINATION OF THE A50T:S279G:S280K:V281K:K282E:H283N VARIANT OF CITRATE SYNTHASE FROM E. COLI COMPLEXED with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Citrate synthase, SULFATE ION
Authors:Maurus, R, Brayer, G.D.
Deposit date:2013-02-18
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Enzyme-substrate complexes of allosteric citrate synthase: Evidence for a novel intermediate in substrate binding.
Biochim.Biophys.Acta, 1834, 2013
4X9Y
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Wild-Type Human Pancreatic Alpha-Amylase at True Atomic Resolution (1.07 A)
Descriptor: CALCIUM ION, CHLORIDE ION, Pancreatic alpha-amylase
Authors:Caner, S, Brayer, G.D.
Deposit date:2014-12-11
Release date:2014-12-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Wild-Type Human Pancreatic Alpha-Amylase at True Atomic Resolution (1.07 A)
To be published
3FFV
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Crystal Structure Analysis of Syd
Descriptor: Protein syd
Authors:Maurus, R, Brayer, G.D.
Deposit date:2008-12-04
Release date:2009-01-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure, Binding, and Activity of Syd, a SecY-interacting Protein
J.Biol.Chem., 284, 2009
1YCC
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BU of 1ycc by Molmil
HIGH-RESOLUTION REFINEMENT OF YEAST ISO-1-CYTOCHROME C AND COMPARISONS WITH OTHER EUKARYOTIC CYTOCHROMES C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Louie, G.V, Brayer, G.D.
Deposit date:1990-05-09
Release date:1991-07-15
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:High-resolution refinement of yeast iso-1-cytochrome c and comparisons with other eukaryotic cytochromes c.
J.Mol.Biol., 214, 1990

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