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PDB: 52 results

5IBS
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Structure of E76Q, a Cancer-Associated Mutation of the Oncogenic Phosphatase SHP2
Descriptor: Tyrosine-protein phosphatase non-receptor type 11
Authors:Blacklow, S.C, Stams, T, Fodor, M, LaRochelle, J.R.
Deposit date:2016-02-22
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural and Functional Consequences of Three Cancer-Associated Mutations of the Oncogenic Phosphatase SHP2.
Biochemistry, 55, 2016
5IBM
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Structure of S502P, a Cancer-Associated Mutation of the Oncogenic Phosphatase SHP2
Descriptor: Tyrosine-protein phosphatase non-receptor type 11
Authors:Blacklow, S.C, Stams, T, Fodor, M, LaRochelle, J.R.
Deposit date:2016-02-22
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural and Functional Consequences of Three Cancer-Associated Mutations of the Oncogenic Phosphatase SHP2.
Biochemistry, 55, 2016
6BN5
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BU of 6bn5 by Molmil
Non-receptor Protein Tyrosine Phosphatase SHP2 F285S in Complex with Allosteric Inhibitor JLR-2
Descriptor: 3-benzyl-8-chloro-2-hydroxy-4H-pyrimido[2,1-b][1,3]benzothiazol-4-one, Tyrosine-protein phosphatase non-receptor type 11
Authors:Blacklow, S.C, Stams, T, Fodor, M, LaRochelle, J.R.
Deposit date:2017-11-16
Release date:2017-12-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Identification of an allosteric benzothiazolopyrimidone inhibitor of the oncogenic protein tyrosine phosphatase SHP2.
Bioorg. Med. Chem., 25, 2017
8ESV
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BU of 8esv by Molmil
Structure of human ADAM10-Tspan15 complex bound to 11G2 vFab
Descriptor: 11G2 Fab Heavy Chain, 11G2 Fab Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lipper, C.H, Blacklow, S.C.
Deposit date:2022-10-14
Release date:2023-06-14
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for membrane-proximal proteolysis of substrates by ADAM10.
Cell, 186, 2023
5VO5
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BU of 5vo5 by Molmil
Crystal structure of Lgd-Shrub complex, single chain fusion
Descriptor: Coiled-coil and C2 domain-containing protein 1-like,GH13992p
Authors:McMillan, B.J, Seegar, T.C.M, Blacklow, S.C.
Deposit date:2017-05-02
Release date:2017-06-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Structural Basis for Regulation of ESCRT-III Complexes by Lgd.
Cell Rep, 19, 2017
5W55
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BU of 5w55 by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor JWG048
Descriptor: 1,2-ETHANEDIOL, 11-ethyl-2-({2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidine-1-carbonyl]phenyl}amino)-5-methyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one, Bromodomain-containing protein 4
Authors:Xu, X, Blacklow, S.C.
Deposit date:2017-06-14
Release date:2018-06-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.354 Å)
Cite:Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor JWG048
To Be Published
7JIC
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BU of 7jic by Molmil
Structure of human CD19-CD81 co-receptor complex bound to coltuximab Fab fragment
Descriptor: B-lymphocyte antigen CD19, CD81 antigen, Coltuximab Heavy Chain, ...
Authors:Susa, K.J, Rawson, S, Kruse, A.C, Blacklow, S.C.
Deposit date:2020-07-23
Release date:2021-01-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structure of the B cell co-receptor CD19 bound to the tetraspanin CD81
Science, 371, 2021
6PY8
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BU of 6py8 by Molmil
Crystal structure of the RBPJ-NOTCH1-NRARP ternary complex bound to DNA
Descriptor: DNA, Neurogenic locus notch homolog protein 1, Notch-regulated ankyrin repeat-containing protein, ...
Authors:Jarrett, S.M, Seegar, T.C.M, Blacklow, S.C.
Deposit date:2019-07-29
Release date:2019-08-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.75 Å)
Cite:Extension of the Notch intracellular domain ankyrin repeat stack by NRARP promotes feedback inhibition of Notch signaling.
Sci.Signal., 12, 2019
3NBN
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BU of 3nbn by Molmil
Crystal structure of a dimer of Notch Transcription Complex trimers on HES1 DNA
Descriptor: DNA, HES1 promoter, Mastermind-like protein 1, ...
Authors:Arnett, K.L, Blacklow, S.C.
Deposit date:2010-06-03
Release date:2010-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Structural and mechanistic insights into cooperative assembly of dimeric Notch transcription complexes.
Nat.Struct.Mol.Biol., 17, 2010
3I08
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BU of 3i08 by Molmil
Crystal structure of the S1-cleaved Notch1 Negative Regulatory Region (NRR)
Descriptor: CALCIUM ION, CHLORIDE ION, Neurogenic locus notch homolog protein 1
Authors:Gordon, W.R, Blacklow, S.C.
Deposit date:2009-06-24
Release date:2009-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Effects of S1 cleavage on the structure, surface export, and signaling activity of human Notch1 and Notch2.
Plos One, 4, 2009
5HQG
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BU of 5hqg by Molmil
WD40 domain of Human E3 Ubiquitin Ligase COP1 (RFWD2)
Descriptor: E3 ubiquitin-protein ligase RFWD2
Authors:Uljon, S, Blacklow, S.C.
Deposit date:2016-01-21
Release date:2016-04-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Substrate Selectivity of the E3 Ligase COP1.
Structure, 24, 2016
5IGO
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BU of 5igo by Molmil
WD40 domain of Arabidopsis thaliana E3 Ubiquitin Ligase COP1 in complex with peptide from Trib1
Descriptor: E3 ubiquitin-protein ligase COP1, Tribbles homolog 1
Authors:Uljon, S, Blacklow, S.C.
Deposit date:2016-02-28
Release date:2016-04-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis for Substrate Selectivity of the E3 Ligase COP1.
Structure, 24, 2016
7RDB
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BU of 7rdb by Molmil
Crystal structure of Tspan15 large extracellular loop (Tspan15 LEL)
Descriptor: Tetraspanin-15
Authors:Lipper, C.H, Gabriel, K.H, Seegar, T.C.M, Durr, K.L, Tomlinson, M.G, Blacklow, S.C.
Deposit date:2021-07-09
Release date:2021-11-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Crystal structure of the Tspan15 LEL domain reveals a conserved ADAM10 binding site.
Structure, 30, 2022
7RD5
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BU of 7rd5 by Molmil
Crystal structure of Tspan15 large extracellular loop (Tspan15 LEL) in complex with 1C12 Fab
Descriptor: 1C12 Fab Heavy Chain, 1C12 Fab Light Chain, Tetraspanin-15
Authors:Lipper, C.H, Gabriel, K.H, Seegar, T.C.M, Durr, K.L, Tomlinson, M.G, Blacklow, S.C.
Deposit date:2021-07-09
Release date:2021-11-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Crystal structure of the Tspan15 LEL domain reveals a conserved ADAM10 binding site.
Structure, 30, 2022
6NCE
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BU of 6nce by Molmil
Crystal structure of the human FOXN3 DNA binding domain in complex with a forkhead DNA sequence
Descriptor: DNA (5'-D(*AP*CP*AP*TP*TP*GP*TP*TP*TP*AP*CP*TP*TP*AP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*TP*AP*AP*GP*TP*AP*AP*AP*CP*AP*AP*TP*G)-3'), Forkhead box protein N3, ...
Authors:Rogers, J.M, Jarrett, S.M, Seegar, T.C, Waters, C.T, Hallworth, A.N, Blacklow, S.C, Bulyk, M.L.
Deposit date:2018-12-11
Release date:2019-02-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Bispecific Forkhead Transcription Factor FoxN3 Recognizes Two Distinct Motifs with Different DNA Shapes.
Mol. Cell, 74, 2019
6NCM
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BU of 6ncm by Molmil
Crystal structure of the human FOXN3 DNA binding domain in complex with a forkhead-like (FHL) DNA sequence
Descriptor: DNA (5'-D(*AP*TP*AP*GP*CP*GP*TP*CP*TP*TP*AP*GP*CP*AP*TP*G)-3'), DNA (5'-D(*TP*CP*AP*TP*GP*CP*TP*AP*AP*GP*AP*CP*GP*CP*TP*A)-3'), Forkhead box protein N3, ...
Authors:Rogers, J.M, Jarrett, S.M, Seegar, T.C, Waters, C.T, Hallworth, A.N, Blacklow, S.C, Bulyk, M.L.
Deposit date:2018-12-11
Release date:2019-02-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.704 Å)
Cite:Bispecific Forkhead Transcription Factor FoxN3 Recognizes Two Distinct Motifs with Different DNA Shapes.
Mol. Cell, 74, 2019
4ZLP
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BU of 4zlp by Molmil
Crystal Structure of Notch3 Negative Regulatory Region
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Xu, X, Blacklow, S.C.
Deposit date:2015-05-01
Release date:2015-08-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.479 Å)
Cite:Insights into Autoregulation of Notch3 from Structural and Functional Studies of Its Negative Regulatory Region.
Structure, 23, 2015
5IGQ
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BU of 5igq by Molmil
WD40 domain of Human E3 Ubiquitin Ligase COP1 (RFWD2) bound to peptide from Trib1
Descriptor: E3 ubiquitin-protein ligase RFWD2, Tribbles homolog 1
Authors:Uljon, S, Blacklow, S.C.
Deposit date:2016-02-28
Release date:2016-04-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structural Basis for Substrate Selectivity of the E3 Ligase COP1.
Structure, 24, 2016
5I6V
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BU of 5i6v by Molmil
Structure of F285S, a Cancer-Associated Mutation of the Oncogenic Phosphatase SHP2
Descriptor: GLYCEROL, Tyrosine-protein phosphatase non-receptor type 11
Authors:Xu, X, Blacklow, S.C.
Deposit date:2016-02-16
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural and Functional Consequences of Three Cancer-Associated Mutations of the Oncogenic Phosphatase SHP2.
Biochemistry, 55, 2016
5J45
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BU of 5j45 by Molmil
Crystal structure of Shrub, fly ortholog of SNF7/CHMP4B
Descriptor: GH13992p
Authors:McMillan, B.J, Blacklow, S.C.
Deposit date:2016-03-31
Release date:2016-07-20
Last modified:2016-08-17
Method:X-RAY DIFFRACTION (2.758 Å)
Cite:Electrostatic Interactions between Elongated Monomers Drive Filamentation of Drosophila Shrub, a Metazoan ESCRT-III Protein.
Cell Rep, 16, 2016
5L2Q
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BU of 5l2q by Molmil
Serine/threonine-protein kinase 40 (STK40) kinase homology domain
Descriptor: Serine/threonine-protein kinase 40
Authors:Durzynska, I, Uljon, S, Blacklow, S.C.
Deposit date:2016-08-02
Release date:2017-02-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:STK40 Is a Pseudokinase that Binds the E3 Ubiquitin Ligase COP1.
Structure, 25, 2017
4XI7
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BU of 4xi7 by Molmil
Crystal structure of the MZM-REP domains of Mind bomb 1 in complex with Jagged1 N-box peptide
Descriptor: E3 ubiquitin-protein ligase MIB1, Jagged 1 N-box peptide, SULFATE ION, ...
Authors:McMillan, B.J, Blacklow, S.C.
Deposit date:2015-01-06
Release date:2015-03-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:A tail of two sites: a bipartite mechanism for recognition of notch ligands by mind bomb e3 ligases.
Mol.Cell, 57, 2015
4XIB
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BU of 4xib by Molmil
Crystal structure of the MZM-REP domains of Mind bomb 1 in complex with fly Delta N-box peptide
Descriptor: Delta N-box peptide, E3 ubiquitin-protein ligase MIB1, SULFATE ION, ...
Authors:McMillan, B.J, Blacklow, S.C.
Deposit date:2015-01-06
Release date:2015-03-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.147 Å)
Cite:A tail of two sites: a bipartite mechanism for recognition of notch ligands by mind bomb e3 ligases.
Mol.Cell, 57, 2015
4XI6
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BU of 4xi6 by Molmil
Crystal structure of the MZM-REP domains of Mind bomb 1
Descriptor: E3 ubiquitin-protein ligase MIB1, SULFATE ION, ZINC ION
Authors:McMillan, B.J, Blacklow, S.C.
Deposit date:2015-01-06
Release date:2015-03-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:A tail of two sites: a bipartite mechanism for recognition of notch ligands by mind bomb e3 ligases.
Mol.Cell, 57, 2015
5WA5
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BU of 5wa5 by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor XMD11-50
Descriptor: 1,2-ETHANEDIOL, 2-[(2-methoxy-4-{[4-(4-methylpiperazin-1-yl)piperidin-1-yl]carbonyl}phenyl)amino]-5,11-dimethyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one, Bromodomain-containing protein 4
Authors:Xu, X, Blacklow, S.C.
Deposit date:2017-06-24
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.172 Å)
Cite:Structural and Atropisomeric Factors Governing the Selectivity of Pyrimido-benzodiazipinones as Inhibitors of Kinases and Bromodomains.
ACS Chem. Biol., 13, 2018

 

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