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PDB: 150 件

1Q7G
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Homoserine Dehydrogenase in complex with suicide inhibitor complex NAD-5-hydroxy-4-Oxonorvaline
分子名称: Homoserine dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE-5-HYDROXY-4-OXONORVALINE, SODIUM ION
著者Jacques, S.L, Mirza, I.A, Ejim, L, Koteva, K, Hughes, D.W, Green, K, Kinach, R, Honek, J.F, Lai, H.K, Berghuis, A.M, Wright, G.D.
登録日2003-08-18
公開日2003-10-21
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Enzyme assisted suicide: Molecular basis for the antifungal activity of 5-hydroxy-4-oxonorvaline by potent inhibition of homoserine dehydrogenase
Chem.Biol., 10, 2003
4XJE
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CRYSTAL STRUCTURE OF ANT(2") IN COMPLEX WITH AMP AND TOBRAMYCIN
分子名称: ADENOSINE MONOPHOSPHATE, AadB, GLYCEROL, ...
著者Rodionov, D, Bassenden, A.V, Berghuis, A.M.
登録日2015-01-08
公開日2016-01-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Revisiting the Catalytic Cycle and Kinetic Mechanism of AminoglycosideO-Nucleotidyltransferase(2′′): A Structural and Kinetic Study.
Acs Chem.Biol., 2020
4XQR
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Crystal structure of unliganded human FPPS at 2.15 angstrom resolution
分子名称: Farnesyl pyrophosphate synthase, PHOSPHATE ION
著者Park, J, Berghuis, A.M.
登録日2015-01-20
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of unliganded human FPPS at 2.15 angstrom resolution
To Be Published
4XQT
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Crystal structure of human FPPS in complex with three magnesium ions
分子名称: Farnesyl pyrophosphate synthase, MAGNESIUM ION, SULFATE ION
著者Park, J, Berghuis, A.M.
登録日2015-01-20
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of human FPPS in complex with three magnesium ions
To Be Published
4XQS
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Crystal structure of human FPPS in complex with one magnesium ion
分子名称: Farnesyl pyrophosphate synthase, MAGNESIUM ION, SULFATE ION
著者Park, J, Berghuis, A.M.
登録日2015-01-20
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of human FPPS in complex with one magnesium ion
To Be Published
2B0Q
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Crystal Structure Of 3',5"-Aminoglycoside Phosphotransferase Type IIIa ADP Neomycin B Complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Aminoglycoside 3'-phosphotransferase, MAGNESIUM ION, ...
著者Fong, D.H, Berghuis, A.M.
登録日2005-09-14
公開日2005-09-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Substrate promiscuity of an aminoglycoside antibiotic resistance enzyme via target mimicry.
Embo J., 21, 2002
2B7L
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Crystal Structure of CTP:Glycerol-3-Phosphate Cytidylyltransferase from Staphylococcus aureus
分子名称: glycerol-3-phosphate cytidylyltransferase
著者Fong, D.H, Yim, V.C.-N, D'Elia, M.A, Brown, E.D, Berghuis, A.M.
登録日2005-10-04
公開日2006-06-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of CTP:glycerol-3-phosphate cytidylyltransferase from Staphylococcus aureus: examination of structural basis for kinetic mechanism.
Biochim.Biophys.Acta, 1764, 2006
2B61
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Crystal Structure of Homoserine Transacetylase
分子名称: Homoserine O-acetyltransferase
著者Mirza, I.A, Nazi, I, Korczynska, M, Wright, G.D, Berghuis, A.M.
登録日2005-09-29
公開日2005-11-15
最終更新日2018-02-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal Structure of Homoserine Transacetylase from Haemophilus influenzae Reveals a New Family of alpha/beta-Hydrolases
Biochemistry, 44, 2005
1B87
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CRYSTAL STRUCTURE OF AN AMINOGLYCOSIDE 6'-N-ACETYLTRANSFERASE
分子名称: ACETYL COENZYME *A, PROTEIN (AMINOGLYCOSIDE N6'-ACETYLTRANSFERASE TYPE 1)
著者Wybenga-Groot, L.E, Berghuis, A.M.
登録日1999-02-09
公開日1999-06-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of an aminoglycoside 6'-N-acetyltransferase: defining the GCN5-related N-acetyltransferase superfamily fold.
Structure Fold.Des., 7, 1999
2Z2O
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Crystal Structure of apo virginiamycin B lyase from Staphylococcus aureus
分子名称: CHLORIDE ION, virginiamycin B lyase
著者Korczynska, M, Berghuis, A.M.
登録日2007-05-25
公開日2007-06-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for streptogramin B resistance in Staphylococcus aureus by virginiamycin B lyase
Proc.Natl.Acad.Sci.Usa, 104, 2007
2Z2N
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Crystal Structure of selenomethionine substituted virginiamycin B lyase from Staphylococcus aureus
分子名称: CHLORIDE ION, virginiamycin B lyase
著者Korczynska, M, Berghuis, A.M.
登録日2007-05-25
公開日2007-06-19
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis for streptogramin B resistance in Staphylococcus aureus by virginiamycin B lyase
Proc.Natl.Acad.Sci.Usa, 104, 2007
2Z2P
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Crystal Structure of catalytically inactive H270A virginiamycin B lyase from Staphylococcus aureus with Quinupristin
分子名称: 5-(2-DIETHYLAMINO-ETHANESULFONYL)-21-HYDROXY-10-ISOPROPYL-11,19-DIMETHYL-9,26-DIOXA-3,15,28-TRIAZA-TRICYCLO[23.2.1.00,255]OCTACOSA-1(27),12,17,19,25(28)-PENTAENE-2,8,14,23-TETRAONE, MAGNESIUM ION, Quinupristin, ...
著者Korczynska, M, Berghuis, A.M.
登録日2007-05-25
公開日2007-06-19
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis for Streptogramin B Resistance in Staphylococcus Aureus by Virginiamycin B Lyase
Proc.Natl.Acad.Sci.USA, 104, 2007
1SB9
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Crystal structure of Pseudomonas aeruginosa UDP-N-acetylglucosamine 4-epimerase complexed with UDP-glucose
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, URIDINE-5'-DIPHOSPHATE-GLUCOSE, wbpP
著者Ishiyama, N, Creuzenet, C, Lam, J.S, Berghuis, A.M.
登録日2004-02-10
公開日2004-05-25
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of WbpP, a Genuine UDP-N-acetylglucosamine 4-Epimerase from Pseudomonas aeruginosa: SUBSTRATE SPECIFICITY IN UDP-HEXOSE 4-EPIMERASES.
J.Biol.Chem., 279, 2004
3D3D
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Bacteriophage lambda lysozyme complexed with a chitohexasaccharide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lysozyme, SULFATE ION
著者Leung, A.K.W, Berghuis, A.M.
登録日2008-05-09
公開日2008-09-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the lytic transglycosylase from bacteriophage lambda in complex with hexa-N-acetylchitohexaose
Biochemistry, 40, 2001
1TVE
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Homoserine Dehydrogenase in complex with 4-(4-hydroxy-3-isopropylphenylthio)-2-isopropylphenol
分子名称: 4-(4-HYDROXY-3-ISOPROPYLPHENYLTHIO)-2-ISOPROPYLPHENOL, Homoserine dehydrogenase
著者Ejim, L, Mirza, I.A, Capone, C, Nazi, I, Jenkins, S, Chee, G.L, Berghuis, A.M, Wright, G.D.
登録日2004-06-29
公開日2004-07-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献New phenolic inhibitors of yeast homoserine dehydrogenase
Bioorg.Med.Chem., 12, 2004
1SB8
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Crystal structure of Pseudomonas aeruginosa UDP-N-acetylglucosamine 4-epimerase complexed with UDP-N-acetylgalactosamine
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE, wbpP
著者Ishiyama, N, Creuzenet, C, Lam, J.S, Berghuis, A.M.
登録日2004-02-10
公開日2004-05-25
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of WbpP, a Genuine UDP-N-acetylglucosamine 4-Epimerase from Pseudomonas aeruginosa: SUBSTRATE SPECIFICITY IN UDP-HEXOSE 4-EPIMERASES.
J.Biol.Chem., 279, 2004
3EIG
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Crystal structure of a methotrexate-resistant mutant of human dihydrofolate reductase
分子名称: CADMIUM ION, Dihydrofolate reductase, METHOTREXATE, ...
著者Yachnin, B.J, Berghuis, A.M.
登録日2008-09-15
公開日2009-05-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Multiple conformers in active site of human dihydrofolate reductase F31R/Q35E double mutant suggest structural basis for methotrexate resistance.
J.Biol.Chem., 284, 2009
6VOU
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Aminoglycoside N-2'-Acetyltransferase-Ia [AAC(2')-Ia] in complex with acetylated-plazomicin and CoA
分子名称: (2S)-N-[(1R,2S,3S,4R,5S)-4-{[(2S,3R)-3-(acetylamino)-6-{[(2-hydroxyethyl)amino]methyl}-3,4-dihydro-2H-pyran-2-yl]oxy}-5-amino-2-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-3-hydroxycyclohexyl]-4-amino-2-hydroxybutanamide, (4S)-2-METHYL-2,4-PENTANEDIOL, 3,3',3''-phosphanetriyltripropanoic acid, ...
著者Bassenden, A.V, Berghuis, A.M.
登録日2020-01-31
公開日2021-06-02
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis for plazomicin antibiotic action and resistance.
Commun Biol, 4, 2021
6VR3
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Aminoglycoside N-2'-Acetyltransferase-Ia [AAC(2')-Ia] in complex with acetylated-netilmicin and CoA
分子名称: Aminoglycoside 2'-N-acetyltransferase, COENZYME A, N-[(2S,3R)-2-{[(1R,2S,3S,4R,6S)-6-amino-3-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-lyxopyranosyl]oxy}-4-(ethylamino) -2-hydroxycyclohexyl]oxy}-6-(aminomethyl)-3,4-dihydro-2H-pyran-3-yl]acetamide
著者Bassenden, A.V, Berghuis, A.M.
登録日2020-02-06
公開日2021-06-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and phylogenetic analyses of resistance to next-generation aminoglycosides conferred by AAC(2') enzymes.
Sci Rep, 11, 2021
6VR2
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Aminoglycoside N-2'-Acetyltransferase-Ia [AAC(2')-Ia] in complex with acetylated-tobramycin and CoA
分子名称: (1S,2S,3R,4S,6R)-3-{[2-(acetylamino)-6-amino-2,3,6-trideoxy-alpha-D-ribo-hexopyranosyl]oxy}-4,6-diamino-2-hydroxycycloh exyl 3-amino-3-deoxy-alpha-D-glucopyranoside, ACETATE ION, Aminoglycoside 2'-N-acetyltransferase, ...
著者Bassenden, A.V, Berghuis, A.M.
登録日2020-02-06
公開日2021-06-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structural and phylogenetic analyses of resistance to next-generation aminoglycosides conferred by AAC(2') enzymes.
Sci Rep, 11, 2021
6VTA
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Aminoglycoside N-2'-Acetyltransferase-Ia [AAC(2')-Ia] in complex with amikacin and acetyl-CoA
分子名称: (2S)-N-[(1R,2S,3S,4R,5S)-4-[(2R,3R,4S,5S,6R)-6-(aminomethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-5-azanyl-2-[(2S,3R,4S,5S ,6R)-4-azanyl-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]oxy-3-oxidanyl-cyclohexyl]-4-azanyl-2-oxidanyl-butanamide, ACETYL COENZYME *A, Aminoglycoside 2'-N-acetyltransferase
著者Bassenden, A.V, Berghuis, A.M.
登録日2020-02-12
公開日2021-06-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Structural and phylogenetic analyses of resistance to next-generation aminoglycosides conferred by AAC(2') enzymes.
Sci Rep, 11, 2021
1J7U
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Crystal Structure of 3',5"-Aminoglycoside Phosphotransferase Type IIIa AMPPNP Complex
分子名称: AMINOGLYCOSIDE 3'-PHOSPHOTRANSFERASE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Burk, D.L, Hon, W.C, Leung, A.K.-W, Berghuis, A.M.
登録日2001-05-18
公開日2001-08-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural analyses of nucleotide binding to an aminoglycoside phosphotransferase.
Biochemistry, 40, 2001
1J7L
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Crystal Structure of 3',5"-Aminoglycoside Phosphotransferase Type IIIa ADP Complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, AMINOGLYCOSIDE 3'-PHOSPHOTRANSFERASE, MAGNESIUM ION
著者Burk, D.L, Hon, W.C, Leung, A.K.-W, Berghuis, A.M.
登録日2001-05-17
公開日2001-08-08
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural analyses of nucleotide binding to an aminoglycoside phosphotransferase.
Biochemistry, 40, 2001
1J7I
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Crystal Structure of 3',5"-Aminoglycoside Phosphotransferase Type IIIa Apoenzyme
分子名称: AMINOGLYCOSIDE 3'-PHOSPHOTRANSFERASE
著者Burk, D.L, Hon, W.C, Leung, A.K.-W, Berghuis, A.M.
登録日2001-05-16
公開日2001-08-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural analyses of nucleotide binding to an aminoglycoside phosphotransferase.
Biochemistry, 40, 2001
4DEM
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Crystal structure of human FPPS in complex with YS_04_70
分子名称: Farnesyl pyrophosphate synthase, MAGNESIUM ION, [({4-[4-(propan-2-yloxy)phenyl]pyridin-2-yl}amino)methanediyl]bis(phosphonic acid)
著者Park, J, Lin, Y.-S, Tsantrizos, Y.S, Berghuis, A.M.
登録日2012-01-20
公開日2012-03-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Design and Synthesis of Active Site Inhibitors of the Human Farnesyl Pyrophosphate Synthase: Apoptosis and Inhibition of ERK Phosphorylation in Multiple Myeloma Cells.
J.Med.Chem., 55, 2012

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