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PDB: 110 results

8A12
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Plasmodium falciparum Myosin A full-length, post-rigor state complexed to Mg.ATP-gamma-S
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Moussaoui, D, Robblee, J.P, Auguin, D, Fisher, F, Fagnant, P.M, MacFarlane, J.E, Mueller-Dieckmann, C, Baum, J, Robert-Paganin, J, Trybus, K.M, Houdusse, A.
Deposit date:2022-05-31
Release date:2023-06-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Mechanism of small molecule inhibition of Plasmodium falciparum myosin A informs antimalarial drug design.
Nat Commun, 14, 2023
5UMD
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Structure of the Plasmodium falciparum 80S ribosome bound to the antimalarial drug mefloquine
Descriptor: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Wong, W, Bai, X.-C, Brown, A, Scheres, S, Baum, J.
Deposit date:2017-01-27
Release date:2017-03-01
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Mefloquine targets the Plasmodium falciparum 80S ribosome to inhibit protein synthesis.
Nat Microbiol, 2, 2017
3Q2B
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BU of 3q2b by Molmil
Crystal Structure of an Actin Depolymerizing Factor
Descriptor: BETA-MERCAPTOETHANOL, Cofilin/actin-depolymerizing factor homolog 1, D(-)-TARTARIC ACID
Authors:Wong, W, Clarke, O.B, Gulbis, J.M, Baum, J.
Deposit date:2010-12-19
Release date:2011-06-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Minimal requirements for actin filament disassembly revealed by structural analysis of malaria parasite actin-depolymerizing factor 1
Proc.Natl.Acad.Sci.USA, 108, 2011
2JUA
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BU of 2jua by Molmil
Assignment, structure, and dynamics of de novo designed protein S836
Descriptor: de novo protein S836
Authors:Go, A, Kim, S, Baum, J.S, Hecht, M.H.
Deposit date:2007-08-16
Release date:2008-05-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure and dynamics of de novo proteins from a designed superfamily of 4-helix bundles.
Protein Sci., 17, 2008
8CDQ
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BU of 8cdq by Molmil
Plasmodium falciparum Myosin A full-length, post-rigor state complexed to the inhibitor KNX-002 and Mg.ATP-gamma-S
Descriptor: 1,2-ETHANEDIOL, 1-(4-methoxyphenyl)-~{N}-[(3-thiophen-2-yl-1~{H}-pyrazol-4-yl)methyl]cyclopropan-1-amine, GLYCEROL, ...
Authors:Moussaoui, D, Robblee, J.P, Robert-Paganin, J, Auguin, D, Fisher, F, Fagnant, P.M, MacFarlane, J.E, Schaletzky, J, Wehri, E, Mueller-Dieckmann, C, Baum, J, Trybus, K.M, Houdusse, A.
Deposit date:2023-01-31
Release date:2023-06-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Mechanism of small molecule inhibition of Plasmodium falciparum myosin A informs antimalarial drug design.
Nat Commun, 14, 2023
8CDM
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Plasmodium falciparum Myosin A full-length, post-rigor state complexed to the inhibitor KNX-002
Descriptor: 1,2-ETHANEDIOL, 1-(4-methoxyphenyl)-~{N}-[(3-thiophen-2-yl-1~{H}-pyrazol-4-yl)methyl]cyclopropan-1-amine, Myosin A tail domain interacting protein, ...
Authors:Moussaoui, D, Robblee, J.P, Robert-Paganin, J, Auguin, D, Fisher, F, Fagnant, P.M, MacFarlane, J.E, Mueller-Dieckmann, C, Baum, J, Trybus, K.M, Houdusse, A.
Deposit date:2023-01-31
Release date:2024-02-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Mechanism of small molecule inhibition of Plasmodium falciparum myosin A informs antimalarial drug design.
Nat Commun, 14, 2023
1P68
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BU of 1p68 by Molmil
Solution structure of S-824, a de novo designed four helix bundle
Descriptor: De novo designed protein S-824
Authors:Wei, Y, Kim, S, Fela, D, Baum, J, Hecht, M.H.
Deposit date:2003-04-29
Release date:2003-11-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a de novo protein from a designed combinatorial library.
Proc.Natl.Acad.Sci.Usa, 100, 2003
2LRV
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BU of 2lrv by Molmil
Assignment of E coli periplasmic protein YmgD
Descriptor: Uncharacterized protein ymgD
Authors:Wu, K, Inouye, M, Baum, J, Hsu, S, Masuda, H.
Deposit date:2012-04-13
Release date:2013-04-17
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of homodimeric periplasmic protein YmgD in E. coli
To be Published
2LRM
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BU of 2lrm by Molmil
Assignment and structure of E coli periplasmic protein YmgD
Descriptor: Uncharacterized protein ymgD
Authors:Wu, K, Inouye, M, Baum, J, Hsu, S, Masuda, H.
Deposit date:2012-04-07
Release date:2013-04-10
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of homodimeric periplasmic protein YmgD in E. coli
To be Published
6I7E
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BU of 6i7e by Molmil
Plasmodium falciparum Myosin A, Pre-powerstroke
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Myosin-A, ...
Authors:Robert-Paganin, J, Auguin, D, Moussaoui, D, Jousset, G, Baum, J, Trybus, K.M, Houdusse, A.
Deposit date:2018-11-16
Release date:2019-08-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.492 Å)
Cite:Plasmodium myosin A drives parasite invasion by an atypical force generating mechanism.
Nat Commun, 10, 2019
6I7D
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Plasmodium falciparum Myosin A, post-rigor and rigor-like states
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Myosin-A
Authors:Robert-Paganin, J, Auguin, D, Moussaoui, D, Jousset, G, Baum, J, Trybus, K.M, Houdusse, A.
Deposit date:2018-11-16
Release date:2019-08-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Plasmodium myosin A drives parasite invasion by an atypical force generating mechanism.
Nat Commun, 10, 2019
3J7A
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BU of 3j7a by Molmil
Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit
Descriptor: 18S ribosomal RNA, 40S ribosomal protein eS1, 40S ribosomal protein eS10, ...
Authors:Wong, W, Bai, X.C, Brown, A, Fernandez, I.S, Hanssen, E, Condron, M, Tan, Y.H, Baum, J, Scheres, S.H.W.
Deposit date:2014-06-03
Release date:2014-07-16
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine.
Elife, 3, 2014
3J79
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BU of 3j79 by Molmil
Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit
Descriptor: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Wong, W, Bai, X.C, Brown, A, Fernandez, I.S, Hanssen, E, Condron, M, Tan, Y.H, Baum, J, Scheres, S.H.W.
Deposit date:2014-06-02
Release date:2014-07-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine.
Elife, 3, 2014
8UXN
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BU of 8uxn by Molmil
Caulobacter crescentus FljM flagellar filament (symmetrized)
Descriptor: Flagellin FljM
Authors:Sanchez, J.C, Montemayor, E.J, Ploscariu, N.T, Parrell, D, Baumgardt, J.K, Yang, J.E, Sibert, B, Cai, K, Wright, E.R.
Deposit date:2023-11-09
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (2.11 Å)
Cite:Direct evidence for multi-flagellin filament stabilization via atomic-level architecture of Caulobacter crescentus flagellar filaments
To Be Published
8UXK
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BU of 8uxk by Molmil
Caulobacter crescentus FljL flagellar filament (asymmetrical)
Descriptor: Flagellin
Authors:Sanchez, J.C, Montemayor, E.J, Ploscariu, N.T, Parrell, D, Baumgardt, J.K, Yang, J.E, Sibert, B, Cai, K, Wright, E.R.
Deposit date:2023-11-09
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:Direct evidence for multi-flagellin filament stabilization via atomic-level architecture of Caulobacter crescentus flagellar filaments
To Be Published
8UXJ
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BU of 8uxj by Molmil
Caulobacter crescentus FljK flagellar filament (asymmetrical)
Descriptor: Flagellin FljK
Authors:Sanchez, J.C, Montemayor, E.J, Ploscariu, N.T, Parrell, D, Baumgardt, J.K, Yang, J.E, Sibert, B, Cai, K, Wright, E.R.
Deposit date:2023-11-09
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Atomic-level architecture of Caulobacter crescentus flagellar filaments provide evidence for multi-flagellin filament stabilization
To Be Published
5KRS
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BU of 5krs by Molmil
HIV-1 Integrase Catalytic Core Domain in Complex with an Allosteric Inhibitor, 3-(1H-pyrrol-1-yl)-2-thiophenecarboxylic acid
Descriptor: 3-pyrrol-1-ylthiophene-2-carboxylic acid, DIMETHYL SULFOXIDE, Integrase
Authors:Patel, D, Bauman, J.D, Arnold, E.
Deposit date:2016-07-07
Release date:2016-09-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A New Class of Allosteric HIV-1 Integrase Inhibitors Identified by Crystallographic Fragment Screening of the Catalytic Core Domain.
J.Biol.Chem., 291, 2016
5KRT
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BU of 5krt by Molmil
HIV-1 Integrase Catalytic Core Domain (CCD) in Complex with a Fragment-Derived Allosteric Inhibitor
Descriptor: 3-[2,5-bis(chloranyl)pyrrol-1-yl]thiophene-2-carboxylic acid, Integrase
Authors:Patel, D, Bauman, J.D, Arnold, E.
Deposit date:2016-07-07
Release date:2016-09-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:A New Class of Allosteric HIV-1 Integrase Inhibitors Identified by Crystallographic Fragment Screening of the Catalytic Core Domain.
J.Biol.Chem., 291, 2016
9CEP
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BU of 9cep by Molmil
Caulobacter crescentus FljJN flagellar filament (asymmetrical)
Descriptor: Flagellin
Authors:Sanchez, J.C, Montemayor, E.J, Ploscariu, N.T, Parrell, D, Baumgardt, J.K, Yang, J.E, Sibert, B, Cai, K, Wright, E.R.
Deposit date:2024-06-26
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Direct evidence for multi-flagellin filament stabilization via atomic-level architecture of Caulobacter crescentus flagellar filaments
To Be Published
9CEF
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BU of 9cef by Molmil
Caulobacter crescentus FljN flagellar filament (symmetrized)
Descriptor: Flagellin FljN
Authors:Sanchez, J.C, Montemayor, E.J, Ploscariu, N.T, Parrell, D, Baumgardt, J.K, Yang, J.E, Sibert, B, Cai, K, Wright, E.R.
Deposit date:2024-06-26
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (2.22 Å)
Cite:Direct evidence for multi-flagellin filament stabilization via atomic-level architecture of Caulobacter crescentus flagellar filaments
To Be Published
9CEO
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BU of 9ceo by Molmil
Caulobacter crescentus FljJM flagellar filament (asymmetrical)
Descriptor: Flagellin FljM
Authors:Sanchez, J.C, Montemayor, E.J, Ploscariu, N.T, Parrell, D, Baumgardt, J.K, Yang, J.E, Sibert, B, Cai, K, Wright, E.R.
Deposit date:2024-06-26
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Direct evidence for multi-flagellin filament stabilization via atomic-level architecture of Caulobacter crescentus flagellar filaments
To Be Published
9CEJ
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BU of 9cej by Molmil
Caulobacter crescentus FljJK flagellar filament (asymmetrical)
Descriptor: Flagellin
Authors:Sanchez, J.C, Montemayor, E.J, Ploscariu, N.T, Parrell, D, Baumgardt, J.K, Yang, J.E, Sibert, B, Cai, K, Wright, E.R.
Deposit date:2024-06-26
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Direct evidence for multi-flagellin filament stabilization via atomic-level architecture of Caulobacter crescentus flagellar filaments
To Be Published
9CEM
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BU of 9cem by Molmil
Caulobacter crescentus FljJL flagellar filament (asymmetrical)
Descriptor: Flagellin FljL
Authors:Sanchez, J.C, Montemayor, E.J, Ploscariu, N.T, Parrell, D, Baumgardt, J.K, Yang, J.E, Sibert, B, Cai, K, Wright, E.R.
Deposit date:2024-06-26
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (2.46 Å)
Cite:Direct evidence for multi-flagellin filament stabilization via atomic-level architecture of Caulobacter crescentus flagellar filaments
To Be Published
8DXB
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BU of 8dxb by Molmil
HIV-1 reverse transcriptase/rilpivirine with bound fragment 5-fluoroindole-2-carboxylic acid at the NNRTI Adjacent site
Descriptor: 1,2-ETHANEDIOL, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, 5-fluoroindole-2-carboxylic acid, ...
Authors:Chopra, A, Ruiz, F.X, Bauman, J.D, Arnold, E.
Deposit date:2022-08-02
Release date:2023-05-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Halo Library, a Tool for Rapid Identification of Ligand Binding Sites on Proteins Using Crystallographic Fragment Screening.
J.Med.Chem., 66, 2023
8DXH
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HIV-1 reverse transcriptase/rilpivirine with bound fragment 5-fluoroquinazolin-4-ol at W266 site
Descriptor: 1,2-ETHANEDIOL, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, 5-fluoranyl-3,4-dihydroquinazolin-4-ol, ...
Authors:Chopra, A, Ruiz, F.X, Bauman, J.D, Arnold, E.
Deposit date:2022-08-02
Release date:2023-05-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Halo Library, a Tool for Rapid Identification of Ligand Binding Sites on Proteins Using Crystallographic Fragment Screening.
J.Med.Chem., 66, 2023

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