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PDB: 4060 results

8KHQ
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BU of 8khq by Molmil
Bifunctional sulfoxide synthase OvoA_Th2 in complex with histidine and cysteine
Descriptor: 5-histidylcysteine sulfoxide synthase/putative 4-mercaptohistidine N1-methyltranferase, COBALT (II) ION, CYSTEINE, ...
Authors:Wang, J, Ye, K, Wang, X.Y, Yan, W.P.
Deposit date:2023-08-22
Release date:2023-12-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Biochemical and Structural Characterization of OvoA Th2 : A Mononuclear Nonheme Iron Enzyme from Hydrogenimonas thermophila for Ovothiol Biosynthesis.
Acs Catalysis, 13, 2023
3CFR
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BU of 3cfr by Molmil
Structure of the replicating complex of a POL Alpha family DNA Polymerase, ternary complex 2
Descriptor: CALCIUM ION, CHLORIDE ION, DNA (5'-D(*DGP*DCP*DGP*DGP*DAP*DCP*DTP*DGP*DCP*DTP*DTP*DAP*(DOC))-3'), ...
Authors:Wang, J, Klimenko, D, Wang, M, Steitz, T.A, Konigsberg, W.H.
Deposit date:2008-03-04
Release date:2009-03-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Insights into base selectivity from the structures of an RB69 DNA Polymerase triple mutant
To be Published
4HJR
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BU of 4hjr by Molmil
Crystal structure of F2YRS
Descriptor: Tyrosine-tRNA ligase
Authors:Wang, J, Tian, C, Gong, W, Li, F, Shi, P, Li, J, Ding, W.
Deposit date:2012-10-13
Release date:2013-03-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A genetically encoded 19F NMR probe for tyrosine phosphorylation.
Angew.Chem.Int.Ed.Engl., 52, 2013
5YD0
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BU of 5yd0 by Molmil
Crystal structure of Schlafen 13 (SLFN13) N'-domain
Descriptor: Schlafen 8, ZINC ION
Authors:Yang, J.-Y, Gao, S.
Deposit date:2017-09-09
Release date:2018-03-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.182 Å)
Cite:Structure of Schlafen13 reveals a new class of tRNA/rRNA- targeting RNase engaged in translational control
Nat Commun, 9, 2018
6PFU
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BU of 6pfu by Molmil
rsEGFP2 with a chlorinated chromophore in the non-fluorescent off-state in a contracted unit cell
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Chang, J, Romei, M.G, Boxer, S.G.
Deposit date:2019-06-22
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.619 Å)
Cite:Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
4QLC
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BU of 4qlc by Molmil
Crystal structure of chromatosome at 3.5 angstrom resolution
Descriptor: CITRIC ACID, DNA (167-mer), H5, ...
Authors:Jiang, J.S, Zhou, B.R, Xiao, T.S, Bai, Y.W.
Deposit date:2014-06-11
Release date:2015-07-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.503 Å)
Cite:Structural Mechanisms of Nucleosome Recognition by Linker Histones.
Mol.Cell, 33 Suppl 1, 2015
6PFR
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BU of 6pfr by Molmil
rsEGFP2 with a chlorinated chromophore in the fluorescent on-state
Descriptor: Green fluorescent protein
Authors:Chang, J, Romei, M.G, Boxer, S.G.
Deposit date:2019-06-22
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
8TDM
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BU of 8tdm by Molmil
Cryo-EM structure of AtMSL10-K539E
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
8TDJ
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BU of 8tdj by Molmil
Cryo-EM structure of the wild-type AtMSL10 in GDN
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
7YUK
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BU of 7yuk by Molmil
Complex structure of BANP BEN domain bound to DNA
Descriptor: DNA (5'-D(*CP*TP*CP*TP*CP*GP*CP*GP*AP*GP*AP*G)-3'), GLYCEROL, Protein BANP
Authors:Zhang, J, Xiao, Y.Q, Chen, Y.X, Liu, K, Min, J.R.
Deposit date:2022-08-17
Release date:2023-04-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural insights into DNA recognition by the BEN domain of the transcription factor BANP.
J.Biol.Chem., 299, 2023
6BWD
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BU of 6bwd by Molmil
3.7 angstrom cryoEM structure of truncated mouse TRPM7
Descriptor: CHOLESTEROL HEMISUCCINATE, MAGNESIUM ION, Transient receptor potential cation channel subfamily M member 7
Authors:Zhang, J, Li, Z, Duan, J, Li, J, Hulse, R.E, Santa-Cruz, A, Abiria, S.A, Krapivinsky, G, Clapham, D.E.
Deposit date:2017-12-14
Release date:2018-08-15
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of the mammalian TRPM7, a magnesium channel required during embryonic development.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7YUG
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BU of 7yug by Molmil
Structure of human BANP BEN domain
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, BROMIDE ION, CHLORIDE ION, ...
Authors:Zhang, J, Xiao, Y.Q, Chen, Y.X, Liu, K, Min, J.R.
Deposit date:2022-08-17
Release date:2023-04-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structural insights into DNA recognition by the BEN domain of the transcription factor BANP.
J.Biol.Chem., 299, 2023
8TDL
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BU of 8tdl by Molmil
Cryo-EM structure of the wild-type AtMSL10 in saposin
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
8TDK
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BU of 8tdk by Molmil
Cryo-EM structure of AtMSL10-G556V
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
6BWF
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BU of 6bwf by Molmil
4.1 angstrom Mg2+-unbound structure of mouse TRPM7
Descriptor: TRPM7
Authors:Zhang, J, Li, Z, Duan, J, Abiria, S.A, Clapham, D.E.
Deposit date:2017-12-14
Release date:2018-08-15
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure of the mammalian TRPM7, a magnesium channel required during embryonic development.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8H5U
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BU of 8h5u by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with neutralizing nanobody Nb-021
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody Nb-021, ...
Authors:Yang, J, Lin, S, Lu, G.W.
Deposit date:2022-10-13
Release date:2023-10-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Development of a bispecific nanobody conjugate broadly neutralizes diverse SARS-CoV-2 variants and structural basis for its broad neutralization.
Plos Pathog., 19, 2023
5YL2
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BU of 5yl2 by Molmil
Crystal structure of T2R-TTL-Y28 complex
Descriptor: (E)-1-(5-methoxy-2,2-dimethyl-chromen-8-yl)-3-(4-methoxy-3-oxidanyl-phenyl)prop-2-en-1-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Yang, J.H, Yang, T, Wen, J.L, Chen, L.J.
Deposit date:2017-10-16
Release date:2018-04-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:The compound millepachine and its derivatives inhibit tubulin polymerization by irreversibly binding to the colchicine-binding site in beta-tubulin.
J. Biol. Chem., 2018
6BWI
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BU of 6bwi by Molmil
3.7 angstrom cryoEM structure of full length human TRPM4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, SODIUM ION, ...
Authors:Zhang, J, Li, Z, Duan, J, Li, J, Clapham, D.E.
Deposit date:2017-12-15
Release date:2018-12-19
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of full-length human TRPM4.
Proc.Natl.Acad.Sci.USA, 115, 2018
8H5T
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BU of 8h5t by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with neutralizing nanobody Nb-015
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody Nb-015, Spike protein S1
Authors:Yang, J, Lin, S, Lu, G.W.
Deposit date:2022-10-13
Release date:2023-10-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Development of a bispecific nanobody conjugate broadly neutralizes diverse SARS-CoV-2 variants and structural basis for its broad neutralization.
Plos Pathog., 19, 2023
8HQN
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BU of 8hqn by Molmil
Activation mechanism of GPR132 by 9(S)-HODE
Descriptor: (9S,10E,12Z)-9-hydroxyoctadeca-10,12-dienoic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wang, J.L, Ding, J.H, Sun, J.P, Yu, X.
Deposit date:2022-12-13
Release date:2023-10-11
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Functional screening and rational design of compounds targeting GPR132 to treat diabetes.
Nat Metab, 5, 2023
8HVI
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BU of 8hvi by Molmil
Activation mechanism of GPR132 by compound NOX-6-7
Descriptor: 3-methyl-5-[(4-oxidanylidene-4-phenyl-butanoyl)amino]-1-benzofuran-2-carboxylic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wang, J.L, Ding, J.H, Sun, J.P, Yu, X.
Deposit date:2022-12-26
Release date:2023-10-11
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Functional screening and rational design of compounds targeting GPR132 to treat diabetes.
Nat Metab, 5, 2023
8HQE
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BU of 8hqe by Molmil
Cryo-EM structure of the apo-GPR132-Gi
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Wang, J.L, Ding, J.H, Sun, J.P, Yu, X.
Deposit date:2022-12-13
Release date:2023-10-11
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Functional screening and rational design of compounds targeting GPR132 to treat diabetes.
Nat Metab, 5, 2023
8HQM
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BU of 8hqm by Molmil
Activation mechanism of GPR132 by NPGLY
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Wang, J.L, Ding, J.H, Sun, J.P, Yu, X.
Deposit date:2022-12-13
Release date:2023-10-11
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Functional screening and rational design of compounds targeting GPR132 to treat diabetes.
Nat Metab, 5, 2023
6PFS
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BU of 6pfs by Molmil
rsEGFP2 with a chlorinated chromophore in the fluorescent on-state in a contracted unit cell
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Chang, J, Romei, M.G, Boxer, S.G.
Deposit date:2019-06-22
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.759 Å)
Cite:Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
4HJX
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BU of 4hjx by Molmil
Crystal structure of F2YRS complexed with F2Y
Descriptor: 3,5-difluoro-L-tyrosine, Tyrosine-tRNA ligase
Authors:Wang, J, Tian, C, Gong, W, Li, F, Shi, P, Li, J, Ding, W.
Deposit date:2012-10-14
Release date:2013-03-13
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:A genetically encoded 19F NMR probe for tyrosine phosphorylation.
Angew.Chem.Int.Ed.Engl., 52, 2013

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