Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 4046 results

4G6F
DownloadVisualize
BU of 4g6f by Molmil
Crystal Structure of 10E8 Fab in Complex with an HIV-1 gp41 Peptide
Descriptor: 10E8 Heavy Chain, 10E8 Light Chain, gp41 MPER Peptide
Authors:Ofek, G, Huang, J, Connors, M, Kwong, P.D.
Deposit date:2012-07-19
Release date:2012-09-26
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Broad and potent neutralization of HIV-1 by a gp41-specific human antibody.
Nature, 491, 2012
3RGZ
DownloadVisualize
BU of 3rgz by Molmil
Structural insight into brassinosteroid perception by BRI1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chai, J, Han, Z, She, J, Wang, J, Cheng, W.
Deposit date:2011-04-11
Release date:2011-06-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.281 Å)
Cite:Structural insight into brassinosteroid perception by BRI1.
Nature, 474, 2011
5ZWQ
DownloadVisualize
BU of 5zwq by Molmil
Structural Basis for the Enantioselectivity of Est-Y29 toward (S)-ketoprofen
Descriptor: Est-Y29, GLYCEROL, ethyl (2S)-2-[3-(benzenecarbonyl)phenyl]propanoate
Authors:Ngo, D.T, Oh, C, Park, K, Nguyen, L, Byun, H.M, Kim, S, Yoon, S, Ryu, Y, Ryu, B.H, Kim, T.D, Yang, J.W, Kim, K.K.
Deposit date:2018-05-16
Release date:2019-03-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Structural Basis for the Enantioselectivity of Esterase Est-Y29 toward (S)-Ketoprofen
Acs Catalysis, 9, 2019
5Y3R
DownloadVisualize
BU of 5y3r by Molmil
Cryo-EM structure of Human DNA-PK Holoenzyme
Descriptor: DNA (34-MER), DNA (36-MER), DNA-dependent protein kinase catalytic subunit, ...
Authors:Yin, X, Liu, M, Tian, Y, Wang, J, Xu, Y.
Deposit date:2017-07-29
Release date:2017-09-06
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Cryo-EM structure of human DNA-PK holoenzyme
Cell Res., 27, 2017
5I2Q
DownloadVisualize
BU of 5i2q by Molmil
Structure of EF-hand containing protein
Descriptor: CALCIUM ION, EF-hand domain-containing protein D2
Authors:Park, K.R, Kwon, M.S, An, J.Y, Lee, J.G, Youn, H.S, Lee, Y, Kang, J.Y, Kim, T.G, Lim, J.J, Park, J.S, Lee, S.H, Song, W.K, Cheong, H, Jun, C, Eom, S.H.
Deposit date:2016-02-09
Release date:2016-12-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.935 Å)
Cite:Structural implications of Ca(2+)-dependent actin-bundling function of human EFhd2/Swiprosin-1.
Sci Rep, 6, 2016
7WKH
DownloadVisualize
BU of 7wkh by Molmil
the grass carp IFNa
Descriptor: Interferon
Authors:Zou, J, WANG, J, Wang, Z.
Deposit date:2022-01-09
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural and Functional Analyses of Type I IFNa Shed Light Into Its Interaction With Multiple Receptors in Fish.
Front Immunol, 13, 2022
3VPP
DownloadVisualize
BU of 3vpp by Molmil
Crystal Structure of the Human CLEC9A C-type Lectin-Like Domain
Descriptor: C-type lectin domain family 9 member A, CALCIUM ION
Authors:Czabotar, P.E, Zhang, J.G, Policheni, A.N, Shortman, K, Lahoud, M.H, Colman, P.M.
Deposit date:2012-03-07
Release date:2012-04-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.642 Å)
Cite:The dendritic cell receptor Clec9A binds damaged cells via exposed actin filaments.
Immunity, 36, 2012
6A4I
DownloadVisualize
BU of 6a4i by Molmil
Crystal Structure of human TDO inhibitor complex
Descriptor: 1-(6-chloro-1H-indazol-4-yl)cyclohexan-1-ol, CITRIC ACID, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Fu, G, Wang, J, Luo, G, Wu, G, Qian, K.
Deposit date:2018-06-20
Release date:2018-07-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal Structure of human TDO inhibitor complex
To Be Published
5I2O
DownloadVisualize
BU of 5i2o by Molmil
Structure of EF-hand containing protein
Descriptor: CALCIUM ION, EF-hand domain-containing protein D2
Authors:Park, K.R, Kwon, M.S, An, J.Y, Lee, J.G, Youn, H.S, Lee, Y, Kang, J.Y, Kim, T.G, Lim, J.J, Park, J.S, Lee, S.H, Song, W.K, Cheong, H, Jun, C, Eom, S.H.
Deposit date:2016-02-09
Release date:2016-12-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Structural implications of Ca(2+)-dependent actin-bundling function of human EFhd2/Swiprosin-1.
Sci Rep, 6, 2016
7CX0
DownloadVisualize
BU of 7cx0 by Molmil
Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP and inhibitor carbidopa
Descriptor: CARBIDOPA, Decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Yu, X, Gong, M, Huang, J, Liu, W, Chen, C, Guo, R.
Deposit date:2020-09-01
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP and inhibitor carbidopa
to be published
7CX1
DownloadVisualize
BU of 7cx1 by Molmil
Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP and inhibitor methyl-tyrosine
Descriptor: 4-[(2R)-2-(methylamino)propyl]phenol, Decarboxylase
Authors:Yu, X, Gong, M, Huang, J, Liu, W, Chen, C, Guo, R.
Deposit date:2020-09-01
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP and inhibitor methyl-tyrosine
to be published
7CWZ
DownloadVisualize
BU of 7cwz by Molmil
Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis K392A mutant in complex with the cofactor PLP and L-dopa
Descriptor: Decarboxylase, L-DOPAMINE, MAGNESIUM ION, ...
Authors:Yu, X, Gong, M, Huang, J, Liu, W, Chen, C, Guo, R.
Deposit date:2020-09-01
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis K392A mutant in complex with the cofactor PLP and L-dopa
to be published
7DDP
DownloadVisualize
BU of 7ddp by Molmil
Cryo-EM structure of human ACE2 and GX/P2V/2017 RBD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike protein S1, ...
Authors:Niu, S, Wang, J, Wang, H.W, Qi, J.X, Wang, Q.H, Gao, G.F.
Deposit date:2020-10-29
Release date:2021-05-19
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Molecular basis of cross-species ACE2 interactions with SARS-CoV-2-like viruses of pangolin origin.
Embo J., 40, 2021
4PZD
DownloadVisualize
BU of 4pzd by Molmil
Crystal structure of (S)-3-hydroxybutyryl-CoA dehydrogenase PaaH1 in complex with NAD+
Descriptor: 3-Hydroxyacyl-CoA dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Kim, J, Chang, J.H, Kim, K.J.
Deposit date:2014-03-29
Release date:2015-02-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal structure and biochemical properties of the (S)-3-hydroxybutyryl-CoA dehydrogenase PaaH1 from Ralstonia eutropha
Biochem.Biophys.Res.Commun., 448, 2014
7W1N
DownloadVisualize
BU of 7w1n by Molmil
Complex structure of a leaf-branch compost cutinase variant LCC ICCG_KRP
Descriptor: 1,2-ETHANEDIOL, BICINE, Leaf-branch compost cutinase
Authors:Niu, D, Zeng, W, Huang, J.W, Chen, C.C, Liu, W.D, Guo, R.T.
Deposit date:2021-11-19
Release date:2022-03-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Substrate-Binding Mode of a Thermophilic PET Hydrolase and Engineering the Enzyme to Enhance the Hydrolytic Efficacy.
Acs Catalysis, 12, 2022
7DDO
DownloadVisualize
BU of 7ddo by Molmil
Cryo-EM structure of human ACE2 and GD/1/2019 RBD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike protein S1, ...
Authors:Niu, S, Wang, J, Wang, H.W, Qi, J.X, Wang, Q.H, Gao, G.F.
Deposit date:2020-10-29
Release date:2021-05-19
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Molecular basis of cross-species ACE2 interactions with SARS-CoV-2-like viruses of pangolin origin.
Embo J., 40, 2021
7W44
DownloadVisualize
BU of 7w44 by Molmil
Complex structure of a leaf-branch compost cutinase variant LCC ICCG_RIP
Descriptor: 1,2-ETHANEDIOL, IMIDAZOLE, Leaf-branch compost cutinase
Authors:Niu, D, Zeng, W, Huang, J.W, Chen, C.C, Liu, W.D, Guo, R.T.
Deposit date:2021-11-26
Release date:2022-03-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Substrate-Binding Mode of a Thermophilic PET Hydrolase and Engineering the Enzyme to Enhance the Hydrolytic Efficacy.
Acs Catalysis, 12, 2022
7W45
DownloadVisualize
BU of 7w45 by Molmil
Complex structure of a leaf-branch compost cutinase variant LCC ICCG_KIP
Descriptor: CALCIUM ION, Leaf-branch compost cutinase, SODIUM ION
Authors:Niu, D, Zeng, W, Huang, J.W, Chen, C.C, Liu, W.D, Guo, R.T.
Deposit date:2021-11-26
Release date:2022-03-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Substrate-Binding Mode of a Thermophilic PET Hydrolase and Engineering the Enzyme to Enhance the Hydrolytic Efficacy.
Acs Catalysis, 12, 2022
6A8J
DownloadVisualize
BU of 6a8j by Molmil
Crystal structure of bacterial protein toxins
Descriptor: GLYCEROL, RTX toxin, SULFATE ION
Authors:Kim, M.H, Hwang, J, Jang, S.Y.
Deposit date:2018-07-09
Release date:2018-10-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.711 Å)
Cite:Structural basis of inactivation of Ras and Rap1 small GTPases by Ras/Rap1-specific endopeptidase from the sepsis-causing pathogenVibrio vulnificus
J. Biol. Chem., 293, 2018
3VBF
DownloadVisualize
BU of 3vbf by Molmil
Crystal structure of formaldehyde treated human Enterovirus 71 (space group I23)
Descriptor: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Genome Polyprotein, ...
Authors:Wang, X, Peng, W, Ren, J, Hu, Z, Xu, J, Lou, Z, Li, X, Yin, W, Shen, X, Porta, C, Walter, T.S, Evans, G, Axford, D, Owen, R, Rowlands, D.J, Wang, J, Stuart, D.I, Fry, E.E, Rao, Z.
Deposit date:2012-01-02
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A sensor-adaptor mechanism for enterovirus uncoating from structures of EV71.
Nat.Struct.Mol.Biol., 19, 2012
8H24
DownloadVisualize
BU of 8h24 by Molmil
Leucine-rich alpha-2-glycoprotein 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich alpha-2-glycoprotein, SULFATE ION
Authors:Won, S.Y, Park, B.S, Lee, D.S, Kim, H.M, Han, A, Yang, J.
Deposit date:2022-10-04
Release date:2023-08-23
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of LRG1 and the functional significance of LRG1 glycan for LPHN2 activation.
Exp.Mol.Med., 55, 2023
2ID0
DownloadVisualize
BU of 2id0 by Molmil
Escherichia coli RNase II
Descriptor: Exoribonuclease 2, MANGANESE (II) ION
Authors:Zuo, Y, Zhang, J, Wang, Y, Malhotra, A.
Deposit date:2006-09-13
Release date:2006-10-03
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Basis for Processivity and Single-Strand Specificity of RNase II.
Mol.Cell, 24, 2006
8HF0
DownloadVisualize
BU of 8hf0 by Molmil
DmDcr-2/R2D2/LoqsPD with 50bp-dsRNA in Dimer state
Descriptor: Dicer-2, isoform A, LD06392p, ...
Authors:Su, S, Wang, J, Wang, H.W, Ma, J.
Deposit date:2022-11-09
Release date:2023-09-06
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Structural mechanism of R2D2 and Loqs-PD synergistic modulation on DmDcr-2 oligomers.
Nat Commun, 14, 2023
3VBO
DownloadVisualize
BU of 3vbo by Molmil
Crystal structure of formaldehyde treated empty human Enterovirus 71 particle (cryo at 100K)
Descriptor: Genome Polyprotein, capsid protein VP1, capsid protein VP2, ...
Authors:Wang, X, Peng, W, Ren, J, Hu, Z, Xu, J, Lou, Z, Li, X, Yin, W, Shen, X, Porta, C, Walter, T.S, Evans, G, Axford, D, Owen, R, Rowlands, D.J, Wang, J, Stuart, D.I, Fry, E.E, Rao, Z.
Deposit date:2012-01-02
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:A sensor-adaptor mechanism for enterovirus uncoating from structures of EV71.
Nat.Struct.Mol.Biol., 19, 2012
4QB9
DownloadVisualize
BU of 4qb9 by Molmil
Crystal structure of Mycobacterium smegmatis Eis in complex with paromomycin
Descriptor: Enhanced intracellular survival protein, PAROMOMYCIN, SULFATE ION
Authors:Kim, K.H, Ahn, D.R, Yoon, H.J, Yang, J.K, Suh, S.W.
Deposit date:2014-05-06
Release date:2015-04-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.293 Å)
Cite:Structure of Mycobacterium smegmatis Eis in complex with paromomycin.
Acta Crystallogr.,Sect.F, 70, 2014

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon