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PDB: 88608 results

3EFG
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BU of 3efg by Molmil
Structure of SlyX protein from Xanthomonas campestris pv. campestris str. ATCC 33913
Descriptor: 1,2-ETHANEDIOL, Protein slyX homolog
Authors:Cuff, M.E, Xu, X, Cui, H, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-09-08
Release date:2008-12-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of SlyX protein from Xanthomonas campestris pv. campestris str. ATCC 33913
TO BE PUBLISHED
3EH5
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BU of 3eh5 by Molmil
Structure of the reduced form of cytochrome ba3 oxidase from Thermus thermophilus
Descriptor: COPPER (I) ION, Cytochrome c oxidase polypeptide 2A, Cytochrome c oxidase subunit 1, ...
Authors:Liu, B, Chen, Y, Doukov, T, Soltis, S.M, Stout, D, Fee, J.A.
Deposit date:2008-09-11
Release date:2009-04-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Combined microspectrophotometric and crystallographic examination of chemically reduced and X-ray radiation-reduced forms of cytochrome ba3 oxidase from Thermus thermophilus: structure of the reduced form of the enzyme.
Biochemistry, 48, 2009
6IC6
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BU of 6ic6 by Molmil
Human cathepsin-C in complex with cyclopropyl peptidyl nitrile inhibitor 1
Descriptor: (2~{S})-~{N}-[(1~{R},2~{R})-1-(aminomethyl)-2-[4-[4-(trifluoromethyl)phenyl]phenyl]cyclopropyl]-2-azanyl-butanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Hakansson, M, Logan, D.T, Korkmaz, B, Lesner, A, Wysocka, M, Gieldon, A, Gauthier, F, Jenne, D, Lauritzen, C, Pedersen, J.
Deposit date:2018-12-02
Release date:2019-04-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Structure-based design and in vivo anti-arthritic activity evaluation of a potent dipeptidyl cyclopropyl nitrile inhibitor of cathepsin C.
Biochem. Pharmacol., 164, 2019
1SZ7
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BU of 1sz7 by Molmil
Crystal structure of Human Bet3
Descriptor: PALMITIC ACID, Trafficking protein particle complex subunit 3
Authors:Turnbull, A.P, Prinz, B, Holz, C, Behlke, J, Schultchen, J, Delbrueck, H, Niesen, F.H, Lang, C, Heinemann, U.
Deposit date:2004-04-05
Release date:2005-01-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of palmitoylated BET3: insights into TRAPP complex assembly and membrane localization
Embo J., 24, 2005
7APJ
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BU of 7apj by Molmil
Structure of autoinhibited Akt1 reveals mechanism of PIP3-mediated activation
Descriptor: NB41, RAC-alpha serine/threonine-protein kinase,Non-specific serine/threonine protein kinase,RAC-alpha serine/threonine-protein kinase
Authors:Truebestein, L, Hornegger, H, Leonard, T.A.
Deposit date:2020-10-16
Release date:2021-08-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of autoinhibited Akt1 reveals mechanism of PIP 3 -mediated activation.
Proc.Natl.Acad.Sci.USA, 118, 2021
7ZQP
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BU of 7zqp by Molmil
Tail tip of siphophage T5 : open cone after interaction with bacterial receptor FhuA
Descriptor: Probable baseplate hub protein, Probable tape measure protein
Authors:Linares, R, Arnaud, C.A, Effantin, G, Darnault, C, Epalle, N, Boeri Erba, E, Schoehn, G, Breyton, C.
Deposit date:2022-05-02
Release date:2023-02-08
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis of bacteriophage T5 infection trigger and E. coli cell wall perforation.
Sci Adv, 9, 2023
5CZG
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BU of 5czg by Molmil
Crystal Structure Analysis of hypothetical bromodomain Tb427.10.7420 from Trypanosoma brucei in complex with bromosporine
Descriptor: Bromosporine, Hypothetical Bromodomain, SODIUM ION, ...
Authors:Jiang, D.Q, Tempel, W, Loppnau, P, Graslund, S, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hui, R, Amani, M, Hou, C.F.D, Structural Genomics Consortium (SGC)
Deposit date:2015-07-31
Release date:2015-08-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Crystal Structure Analysis of hypothetical bromodomain from Trypanosoma brucei
to be published
3EKA
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BU of 3eka by Molmil
Crystal structure of the complex of hyaluranidase trimer with ascorbic acid at 3.1 A resolution reveals the locations of three binding sites
Descriptor: ASCORBIC ACID, Hyaluronidase, phage associated
Authors:Mishra, P, Ethayathulla, A.S, Prem Kumar, R, Singh, N, Sharma, S, Kaur, P, Bhakuni, V, Singh, T.P.
Deposit date:2008-09-19
Release date:2009-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Polysaccharide binding sites in hyaluronate lyase--crystal structures of native phage-encoded hyaluronate lyase and its complexes with ascorbic acid and lactose.
Febs J., 276, 2009
8A7X
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BU of 8a7x by Molmil
NaK C-DI F92A mutant soaked in Cs+
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CESIUM ION, POTASSIUM ION, ...
Authors:Minniberger, S, Plested, A.J.R.
Deposit date:2022-06-21
Release date:2023-02-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Asymmetry and Ion Selectivity Properties of Bacterial Channel NaK Mutants Derived from Ionotropic Glutamate Receptors.
J.Mol.Biol., 435, 2023
3EL6
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BU of 3el6 by Molmil
Crystal Structure of the Erythromycin Dehydratase
Descriptor: CHLORIDE ION, Erythromycin dehydratase, SULFATE ION
Authors:Keatinge-Clay, A.T.
Deposit date:2008-09-20
Release date:2008-11-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the erythromycin polyketide synthase dehydratase.
J.Mol.Biol., 384, 2008
2IAM
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BU of 2iam by Molmil
Structural basis for recognition of mutant self by a tumor-specific, MHC class II-restricted TCR
Descriptor: 15-mer peptide from Triosephosphate isomerase, CD4+ T cell receptor E8 alpha chain, CD4+ T cell receptor E8 beta chain, ...
Authors:Deng, L, Langley, R.J, Mariuzza, R.A.
Deposit date:2006-09-08
Release date:2007-04-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for the recognition of mutant self by a tumor-specific, MHC class II-restricted T cell receptor
Nat.Immunol., 8, 2007
7ZN4
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BU of 7zn4 by Molmil
Tail tip of siphophage T5 : bent fibre after interaction with its bacterial receptor FhuA
Descriptor: Probable baseplate hub protein, Probable central straight fiber
Authors:Linares, R, Arnaud, C.A, Effantin, G, Darnault, C, Epalle, N, Boeri Erba, E, Schoehn, G, Breyton, C.
Deposit date:2022-04-20
Release date:2023-02-08
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.32 Å)
Cite:Structural basis of bacteriophage T5 infection trigger and E. coli cell wall perforation.
Sci Adv, 9, 2023
2W9R
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BU of 2w9r by Molmil
Structural basis of N-end rule substrate recognition in Escherichia coli by the ClpAP adaptor protein ClpS
Descriptor: ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS, DNA PROTECTION DURING STARVATION PROTEIN
Authors:Schuenemann, V, Kralik, S.M, Albrecht, R, Spall, S.K, Truscott, K.N, Dougan, D.A, Zeth, K.
Deposit date:2009-01-28
Release date:2009-04-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis of N-End Rule Substrate Recognition in Escherichia Coli by the Clpap Adaptor Protein Clps.
Embo Rep., 10, 2009
8ITM
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BU of 8itm by Molmil
Cryo-EM structure of GIPR splice variant 2 (SV2) in complex with Gs protein
Descriptor: Gastric inhibitory polypeptide receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhao, F.H, Hang, K.N, Zhou, Q.T, Shao, L.J, Li, H, Li, W.Z, Lin, S, Dai, A.T, Cai, X.Q, Liu, Y.Y, Xu, Y.N, Feng, W.B, Yang, D.H, Wang, M.W.
Deposit date:2023-03-22
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Molecular basis of signal transduction mediated by the human GIPR splice variants.
Proc.Natl.Acad.Sci.USA, 120, 2023
7TBS
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BU of 7tbs by Molmil
Crystal Structure of the Glutaredoxin 2 from Francisella tularensis
Descriptor: CHLORIDE ION, Glutaredoxin 2, SULFATE ION
Authors:Kim, Y, Zhou, M, Grimshaw, S, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-12-22
Release date:2022-01-05
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal Structure of the Glutaredoxin 2 from Francisella tularensis
To Be Published
7ZLV
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BU of 7zlv by Molmil
Tail tip of siphophage T5 : central fibre protein pb4
Descriptor: Probable central straight fiber
Authors:Linares, R, Arnaud, C.A, Effantin, G, Epalle, N, Boeri Erba, E, Schoehn, G, Breyton, C.
Deposit date:2022-04-15
Release date:2023-02-08
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.22 Å)
Cite:Structural basis of bacteriophage T5 infection trigger and E. coli cell wall perforation.
Sci Adv, 9, 2023
6W3L
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BU of 6w3l by Molmil
APE1 exonuclease substrate complex wild-type
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DNA-(apurinic or apyrimidinic site) lyase, ...
Authors:Freudenthal, B.D, Whitaker, A.M.
Deposit date:2020-03-09
Release date:2020-06-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Molecular and structural characterization of disease-associated APE1 polymorphisms.
DNA Repair (Amst.), 91-92, 2020
6P9G
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BU of 6p9g by Molmil
Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with 2-(4-oxoquinazolin-3(4H)-yl)propanoic acid
Descriptor: (2R)-2-(4-oxoquinazolin-3(4H)-yl)propanoic acid, UNKNOWN ATOM OR ION, Ubiquitin carboxyl-terminal hydrolase 5, ...
Authors:Tempel, W, Mann, M.K, Harding, R.J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Schapira, M, Structural Genomics Consortium (SGC)
Deposit date:2019-06-10
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery of Small Molecule Antagonists of the USP5 Zinc Finger Ubiquitin-Binding Domain.
J.Med.Chem., 62, 2019
3EPP
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BU of 3epp by Molmil
Crystal structure of mRNA cap guanine-N7 methyltransferase (RNMT) in complex with sinefungin
Descriptor: SINEFUNGIN, mRNA cap guanine-N7 methyltransferase
Authors:Amaya, M.F, Zeng, H, Loppnau, P, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Botchkarev, A, Min, J, Plotnikov, A.N, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2008-09-29
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal structure of mRNA cap guanine-N7 methyltransferase (RNMT) in complex with sinefungin.
To be Published
5KBT
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BU of 5kbt by Molmil
Cryo-EM structure of GluA2-1xSTZ complex at 6.4 Angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor 2,Voltage-dependent calcium channel gamma-2 subunit, {[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2H)-yl]methyl}phosphonic acid
Authors:Twomey, E.C, Yelshanskaya, M.V, Grassucci, R.A, Frank, J, Sobolevsky, A.I.
Deposit date:2016-06-03
Release date:2016-07-13
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Elucidation of AMPA receptor-stargazin complexes by cryo-electron microscopy.
Science, 353, 2016
8ITL
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BU of 8itl by Molmil
Cryo-EM structure of GIPR splice variant 1 (SV1) in complex with Gs protein
Descriptor: Gastric inhibitory polypeptide receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhao, F.H, Hang, K.N, Zhou, Q.T, Shao, L.J, Li, H, Li, W.Z, Lin, S, Dai, A.T, Cai, X.Q, Liu, Y.Y, Xu, Y.N, Feng, W.B, Yang, D.H, Wang, M.W.
Deposit date:2023-03-22
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Molecular basis of signal transduction mediated by the human GIPR splice variants.
Proc.Natl.Acad.Sci.USA, 120, 2023
3ERW
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BU of 3erw by Molmil
Crystal Structure of StoA from Bacillus subtilis
Descriptor: Sporulation thiol-disulfide oxidoreductase A
Authors:Crow, A, Liu, Y, Moller, M.C, Le Brun, N.E, Hederstedt, L.
Deposit date:2008-10-03
Release date:2009-01-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and Functional Properties of Bacillus subtilis Endospore Biogenesis Factor StoA
J.Biol.Chem., 284, 2009
3E2K
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BU of 3e2k by Molmil
Crystal Structure of the KPC-2 Beta-lactamase/Beta-lactamase inhibitor protein (BLIP)
Descriptor: Beta-lactamase inhibitory protein, Carbapenemase
Authors:Hanes, M.S, Jude, K.M, Berger, J.M, Bonomo, R.A, Handel, T.M.
Deposit date:2008-08-05
Release date:2009-08-04
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and biochemical characterization of the interaction between KPC-2 beta-lactamase and beta-lactamase inhibitor protein
Biochemistry, 48, 2009
3E32
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BU of 3e32 by Molmil
Protein farnesyltransferase complexed with FPP and ethylenediamine scaffold inhibitor 2
Descriptor: FARNESYL DIPHOSPHATE, N-benzyl-N-(2-{(4-cyanophenyl)[(1-methyl-1H-imidazol-5-yl)methyl]amino}ethyl)-1-methyl-1H-imidazole-4-sulfonamide, Protein farnesyltransferase subunit beta, ...
Authors:Hast, M.A, Beese, L.S.
Deposit date:2008-08-06
Release date:2009-03-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural basis for binding and selectivity of antimalarial and anticancer ethylenediamine inhibitors to protein farnesyltransferase.
Chem.Biol., 16, 2009
1TF9
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BU of 1tf9 by Molmil
Streptomyces griseus aminopeptidase complexed with P-Iodo-L-Phenylalanine
Descriptor: Aminopeptidase, CALCIUM ION, IODO-PHENYLALANINE, ...
Authors:Reiland, V, Gilboa, R, Spungin-Bialik, A, Schomburg, D, Shoham, Y, Blumberg, S, Shoham, G.
Deposit date:2004-05-27
Release date:2005-05-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Binding of inhibitory aromatic amino acids to Streptomyces griseus aminopeptidase.
Acta Crystallogr.,Sect.D, 60, 2004

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