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PDB: 89346 件

6TDZ
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Cryo-EM structure of Euglena gracilis mitochondrial ATP synthase, OSCP/F1/c-ring, rotational state 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, FRAGMENT OF TRITON X-100, ...
著者Muhleip, A, Amunts, A.
登録日2019-11-10
公開日2019-11-27
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Structure of a mitochondrial ATP synthase with bound native cardiolipin.
Elife, 8, 2019
7JSS
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BU of 7jss by Molmil
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2020-08-15
公開日2020-11-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献ArfB can displace mRNA to rescue stalled ribosomes.
Nat Commun, 11, 2020
8C5I
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BU of 8c5i by Molmil
Cyanide dihydratase from Bacillus pumilus C1 variant - Q86R,H305K,H308K,H323K
分子名称: Cyanide dihydratase
著者Mulelu, A.E, Reitz, J, van Rooyen, J, Scheffer, M, Frangakis, A.S, Dlamini, L.S, Woodward, J.D, Benedik, M.J, Sewell, B.T.
登録日2023-01-09
公開日2023-01-18
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献The Role of Histidine Residues in the Oligomerization of Cyanide Dihydratase from Bacillus pumilus C1
To Be Published
8SBM
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BU of 8sbm by Molmil
Crystal structure of the wild-type Catalytic ATP-binding domain of Mtb DosS
分子名称: 1,2-ETHANEDIOL, GAF domain-containing protein, SODIUM ION, ...
著者Larson, G, Shi, K, Aihara, H, Bhagi-Damodaran, A.
登録日2023-04-03
公開日2023-11-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Understanding ATP Binding to DosS Catalytic Domain with a Short ATP-Lid.
Biochemistry, 62, 2023
3MBY
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Ternary complex of DNA Polymerase BETA with template base A and 8oxodGTP in the active site with a dideoxy terminated primer
分子名称: 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
著者Batra, V.K, Beard, W.A, Hou, E.W, Pedersen, L.C, Prasad, R, Wilson, S.H.
登録日2010-03-26
公開日2010-06-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mutagenic conformation of 8-oxo-7,8-dihydro-2'-dGTP in the confines of a DNA polymerase active site.
Nat.Struct.Mol.Biol., 17, 2010
5G09
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BU of 5g09 by Molmil
The crystal structure of a S-selective transaminase from Bacillus megaterium bound with R-alpha-methylbenzylamine
分子名称: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, TETRAETHYLENE GLYCOL, ...
著者van Oosterwijk, N, Willies, S, Hekelaar, J, Terwisscha van Scheltinga, A.C, Turner, N.J, Dijkstra, B.W.
登録日2016-03-17
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis of Substrate Range and Enantioselectivity of Two S-Selective Omega- Transaminases
Biochemistry, 55, 2016
7JXC
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BU of 7jxc by Molmil
Mapping neutralizing and immunodominant sites on the SARS-CoV-2 spike receptor-binding domain by structure-guided high-resolution serology
分子名称: NONAETHYLENE GLYCOL, S2H14 antigen-binding (Fab) fragment
著者Park, Y.J, Tortorici, M.A, Walls, A.C, Czudnochowski, N, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G, Veesler, D.
登録日2020-08-27
公開日2020-10-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell, 183, 2020
5Y85
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BU of 5y85 by Molmil
Structure-based Insights into Self-Cleavage by a Four-way Junctional Twister-Sister Ribozyme
分子名称: DNA/RNA (50-MER), MAGNESIUM ION, RNA (5'-R(P*AP*CP*CP*CP*GP*CP*AP*AP*GP*GP*CP*CP*GP*AP*CP*GP*GP*C)-3')
著者Zheng, L, Micura, R.L, Ren, A.
登録日2017-08-18
公開日2017-11-22
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structure-based insights into self-cleavage by a four-way junctional twister-sister ribozyme
Nat Commun, 8, 2017
6C83
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BU of 6c83 by Molmil
Structure of Aurora A (122-403) bound to inhibitory Monobody Mb2 and AMPPCP
分子名称: Aurora kinase A, Mb2 Monobody, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
著者Hoemberger, M, Kutter, S, Zorba, A, Nguyen, V, Shohei, A, Shohei, K, Kern, D.
登録日2018-01-24
公開日2019-02-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Allosteric modulation of a human protein kinase with monobodies.
Proc.Natl.Acad.Sci.USA, 116, 2019
4YD7
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BU of 4yd7 by Molmil
Endothiapepsin in complex with fragment 255
分子名称: 2-(imidazo[1,2-a]pyridin-2-yl)-N-phenylacetamide, ACETATE ION, Endothiapepsin, ...
著者Stieler, M, Heine, A, Klebe, G.
登録日2015-02-21
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.419 Å)
主引用文献Crystallographic Fragment Screening of an Entire Library
To Be Published
7MWV
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BU of 7mwv by Molmil
Structure of the E. coli PutA proline dehydrogenase domain (residues 86-630) complexed with cyclopropanecarboxylic acid
分子名称: Bifunctional protein PutA, FLAVIN-ADENINE DINUCLEOTIDE, PENTAETHYLENE GLYCOL, ...
著者Tanner, J.J, Bogner, A.N.
登録日2021-05-17
公開日2022-01-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Structure-affinity relationships of reversible proline analog inhibitors targeting proline dehydrogenase.
Org.Biomol.Chem., 20, 2022
3M17
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BU of 3m17 by Molmil
Crystal structure of human FcRn with a monomeric peptide inhibitor
分子名称: Beta-2-microglobulin, IgG receptor FcRn large subunit p51, monomeric peptide inhibitor
著者Mezo, A.R, Sridhar, V, Badger, J, Sakorafas, P, Nienaber, V.
登録日2010-03-04
公開日2010-06-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献X-ray crystal structures of monomeric and dimeric peptide inhibitors in complex with the human neonatal Fc receptor, FcRn.
J.Biol.Chem., 285, 2010
6MI6
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BU of 6mi6 by Molmil
STRUCTURE OF CHEA DOMAIN P4 IN COMPLEX WITH AN ADP ANALOG
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy{[(1-hydroxy-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl]disulfanyl}phosphoryl]oxy}phosphoryl]adenosine, ADENOSINE-5'-DIPHOSPHATE, Chemotaxis protein CheA, ...
著者Crane, B.R, Muok, A.R, Chua, T.K, Le, H.
登録日2018-09-19
公開日2018-12-05
最終更新日2019-11-13
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Nucleotide Spin Labeling for ESR Spectroscopy of ATP-Binding Proteins.
Appl.Magn.Reson., 49, 2018
6XSX
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BU of 6xsx by Molmil
The structure of the catalytic module of the metalloprotease ZmpA from Clostridium perfringens
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ZmpA Glycopeptidase
著者Pluvinage, B, Boraston, A.B.
登録日2020-07-16
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular insights into architecturally complex glycopeptidases
Proc.Natl.Acad.Sci.USA, 2021
8R8C
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BU of 8r8c by Molmil
Structure of the N-terminal domain of CMA from Cucumis melo in complex with N-acetylgalactosamine
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose, CADMIUM ION, ...
著者Varrot, A.
登録日2023-11-28
公開日2023-12-27
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Elucidating the glycan-binding specificity and structure of Cucumis melo agglutinin, a new R-type lectin.
Beilstein J Org Chem, 20, 2024
6XI7
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BU of 6xi7 by Molmil
Crystal Structure of wild-type KRAS (GMPPNP-bound) in complex with RAS-binding domain (RBD) and cysteine-rich domain (CRD) of RAF1/CRAF (crystal form I)
分子名称: CHLORIDE ION, Isoform 2B of GTPase KRas, MAGNESIUM ION, ...
著者Chan, A.H, Tran, T.H, Dharmaiah, S, Simanshu, D.K.
登録日2020-06-19
公開日2021-01-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献KRAS interaction with RAF1 RAS-binding domain and cysteine-rich domain provides insights into RAS-mediated RAF activation.
Nat Commun, 12, 2021
7MWU
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BU of 7mwu by Molmil
Structure of the E. coli PutA proline dehydrogenase domain (residues 86-630) complexed with cyclobutanecarboxylic acid
分子名称: Bifunctional protein PutA, FLAVIN-ADENINE DINUCLEOTIDE, PENTAETHYLENE GLYCOL, ...
著者Tanner, J.J, Bogner, A.N.
登録日2021-05-17
公開日2022-01-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Structure-affinity relationships of reversible proline analog inhibitors targeting proline dehydrogenase.
Org.Biomol.Chem., 20, 2022
4YUR
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BU of 4yur by Molmil
Crystal Structure of Plk4 Kinase Domain Bound to Centrinone
分子名称: 2-({2-fluoro-4-[(2-fluoro-3-nitrobenzyl)sulfonyl]phenyl}sulfanyl)-5-methoxy-N-(3-methyl-1H-pyrazol-5-yl)-6-(morpholin-4-yl)pyrimidin-4-amine, Serine/threonine-protein kinase PLK4
著者Shiau, A.K, Motamedi, A.
登録日2015-03-19
公開日2015-06-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Cell biology. Reversible centriole depletion with an inhibitor of Polo-like kinase 4.
Science, 348, 2015
6MKU
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BU of 6mku by Molmil
Crystal structure of the periplasmic Lysine-, Arginine-, Ornithine-binding protein (LAO) D11A mutant from Salmonella typhimurium complexed with arginine
分子名称: ACETATE ION, ARGININE, GLYCEROL, ...
著者Romero-Romero, S, Vergara, R, Espinoza-Perez, G, Rodriguez-Romero, A.
登録日2018-09-26
公開日2019-08-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.727 Å)
主引用文献The interplay of protein-ligand and water-mediated interactions shape affinity and selectivity in the LAO binding protein.
Febs J., 287, 2020
7TBE
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BU of 7tbe by Molmil
Crystal structure of Plasmepsin X from Plasmodium vivax in complex with WM4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[(R)-[(2E,4S)-2-imino-4-methyl-6-oxo-4-(propan-2-yl)-1,3-diazinan-1-yl](phenyl)methyl]-N-[(1S)-1-phenylethyl]benzamide, Plasmepsin X, ...
著者Hodder, A.N, Christensen, J.B, Scally, S.W, Cowman, A.F.
登録日2021-12-21
公開日2022-05-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Basis for drug selectivity of plasmepsin IX and X inhibition in Plasmodium falciparum and vivax.
Structure, 30, 2022
5KGD
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BU of 5kgd by Molmil
Crystal structure of PIM1 with inhibitor: 2-pyridin-3-yl-1~{H}-benzimidazole
分子名称: 1,2-ETHANEDIOL, 2-pyridin-3-yl-1~{H}-benzimidazole, SULFATE ION, ...
著者Ferguson, A.D.
登録日2016-06-13
公開日2017-08-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structure of PIM1 in complex with inhibitor
To Be Published
6TIG
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BU of 6tig by Molmil
Structure of the N terminal domain of Bc2L-C lectin (1-131) in complex with Globo H (H-type 3) antigen
分子名称: Lectin, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose
著者Varrot, A, Bermeo, R.
登録日2019-11-22
公開日2020-01-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献BC2L-C N-Terminal Lectin Domain Complexed with Histo Blood Group Oligosaccharides Provides New Structural Information.
Molecules, 25, 2020
8BYK
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The structure of MadC from Clostridium maddingley reveals new insights into class I lanthipeptide cyclases
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Knospe, C.V, Kamel, M, Spitz, O, Hoeppner, A, Galle, S, Reiners, J, Kedrov, A, Smits, S.H, Schmitt, L.
登録日2022-12-13
公開日2023-02-22
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The structure of MadC from Clostridium maddingley reveals new insights into class I lanthipeptide cyclases.
Front Microbiol, 13, 2022
6F7C
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BU of 6f7c by Molmil
TUBULIN-Compound 12 complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3,4,5-trimethoxy-~{N}-[(~{E})-naphthalen-1-ylmethylideneamino]benzamide, CALCIUM ION, ...
著者Muehlethaler, T, Prota, A.E, Steinmetz, M.O.
登録日2017-12-08
公開日2018-12-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Structural Basis of Colchicine-Site targeting Acylhydrazones active against Multidrug-Resistant Acute Lymphoblastic Leukemia.
Iscience, 21, 2019
4RK4
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BU of 4rk4 by Molmil
Crystal structure of LacI family transcriptional regulator from Lactobacillus casei, Target EFI-512911, with bound glucose
分子名称: SODIUM ION, Transcriptional regulator, LacI family, ...
著者Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N, Chamala, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Lafleur, J, Siedel, R.D, Hillerich, B, Love, J, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-10-11
公開日2014-11-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Crystal Structure of LacI Transcriptional Regulator Lsei_2103 from Lactobacillus casei, Target EFI-512911
To be Published

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件を2024-10-09に公開中

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