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PDB: 88675 件

7TVG
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Crystal Structure of SHOC2 to a resolution of 2.4 Angstrom
分子名称: CHLORIDE ION, Leucine-rich repeat protein SHOC-2, SULFATE ION
著者Bonsor, D.A, Simanshu, D.K.
登録日2022-02-04
公開日2022-05-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the SHOC2-MRAS-PP1C complex provides insights into RAF activation and Noonan syndrome.
Nat.Struct.Mol.Biol., 29, 2022
4WUV
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Crystal Structure of a putative D-Mannonate oxidoreductase from Haemophilus influenza (Avi_5165, TARGET EFI-513796) with bound NAD
分子名称: 1,2-ETHANEDIOL, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yadava, U, Vetting, M.W, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C.
登録日2014-11-03
公開日2014-11-26
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.551 Å)
主引用文献Crystal structure of a putative D-Mannonate oxidoreductase from Haemophilus influenza (Avi_5165, TARGET EFI-513796) with bound NAD
To be published
7ZPV
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Room temperature SSX crystal structure of CTX-M-14
分子名称: Beta-lactamase, SULFATE ION
著者Oberthuer, D, Perbandt, M, Prester, A, Rohde, H, Betzel, C, Yefanov, O.
登録日2022-04-29
公開日2022-11-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Rapid and efficient room-temperature serial synchrotron crystallography using the CFEL TapeDrive.
Iucrj, 9, 2022
6ZML
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BU of 6zml by Molmil
CryoEM Structure of Merkel Cell Polyomavirus Virus-like Particle
分子名称: Capsid protein VP1
著者Bayer, N.J, Januliene, D, Stehle, T, Moeller, A, Blaum, B.S.
登録日2020-07-03
公開日2020-08-05
最終更新日2020-10-07
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of Merkel Cell Polyomavirus Capsid and Interaction with Its Glycosaminoglycan Attachment Receptor.
J.Virol., 94, 2020
7ZRG
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Cryo-EM map of the WT KdpFABC complex in the E1_ATPearly conformation, under turnover conditions
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CARDIOLIPIN, POTASSIUM ION, ...
著者Hielkema, L, Stock, C, Silberberg, J.M, Corey, R.A, Rheinberger, J, Wunnicke, D, Dubach, V.R.A, Stansfeld, P.J, Haenelt, I, Paulino, C.
登録日2022-05-04
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Inhibited KdpFABC transitions into an E1 off-cycle state.
Elife, 11, 2022
4WY3
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Structure of SARS-3CL protease complex with a phenylbenzoyl (R,S)-N-decalin type inhibitor
分子名称: (2S)-2-({[(3R,4aS,8aR)-2-(biphenyl-4-ylcarbonyl)decahydroisoquinolin-3-yl]methyl}amino)-3-(1H-imidazol-5-yl)propanal, 3C-like proteinase
著者Akaji, K, Teruya, K, Shimamoto, Y, Sanjho, A, Yamashita, E, Nakagawa, A.
登録日2014-11-15
公開日2015-02-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Fused-ring structure of decahydroisoquinolin as a novel scaffold for SARS 3CL protease inhibitors.
Bioorg.Med.Chem., 23, 2015
8A1E
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Rabies virus glycoprotein in complex with Fab fragments of 17C7 and 1112-1 neutralizing antibodies
分子名称: Fab 1112-1 heavy chain variable domain, Fab 1112-1 light chain variable domain, Fab 17C7 heavy chain variable domain, ...
著者Ng, W.M, Fedosyuk, S, English, S, Augusto, G, Berg, A, Thorley, L, Haselon, A.S, Segireddy, R.R, Bowden, T.A, Douglas, A.D.
登録日2022-06-01
公開日2022-08-17
最終更新日2022-09-28
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献Structure of trimeric pre-fusion rabies virus glycoprotein in complex with two protective antibodies.
Cell Host Microbe, 30, 2022
6RBJ
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Crystal structure of KDM3B in complex with 5-(1H-tetrazol-5-yl)quinolin-8-ol
分子名称: 1,2-ETHANEDIOL, 5-(1~{H}-1,2,3,4-tetrazol-5-yl)quinolin-8-ol, CHLORIDE ION, ...
著者Johansson, C, Newman, J.A, Kawamura, A, Schofield, C.J, Arrowsmith, C.H, Bountra, C, Edwards, A, Oppermann, U.C.T.
登録日2019-04-10
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.093 Å)
主引用文献Crystal structure of KDM3B in complex with 5-(1H-tetrazol-5-yl)quinolin-8-ol
To Be Published
5M0P
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Crystal structure of cytochrome P450 OleT F79A in complex with arachidonic acid
分子名称: PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, Terminal olefin-forming fatty acid decarboxylase, ...
著者Tee, K.L, Munro, A, Matthews, S, Leys, D, Levy, C.
登録日2016-10-05
公開日2017-01-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Catalytic Determinants of Alkene Production by the Cytochrome P450 Peroxygenase OleTJE.
J. Biol. Chem., 292, 2017
7ZRI
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Cryo-EM structure of the KdpFABC complex in a nucleotide-free E1 conformation loaded with K+
分子名称: CARDIOLIPIN, POTASSIUM ION, Potassium-transporting ATPase ATP-binding subunit, ...
著者Hielkema, L, Stock, C, Silberberg, J.M, Corey, R.A, Wunnicke, D, Stansfeld, P.J, Haenelt, I, Paulino, C.
登録日2022-05-04
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Inhibited KdpFABC transitions into an E1 off-cycle state.
Elife, 11, 2022
4WXE
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BU of 4wxe by Molmil
CRYSTAL STRUCTURE OF A LACI REGULATOR FROM LACTOBACILLUS CASEI (LSEI_2103, TARGET EFI-512911) WITH BOUND TRIS
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
著者Vetting, M.W, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-11-13
公開日2014-11-26
最終更新日2015-10-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献CRYSTAL STRUCTURE OF A LACI REGULATOR FROM LACTOBACILLUS CASEI (LSEI_2103, TARGET EFI-512911) WITH BOUND TRIS
To be published
7U2E
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BU of 7u2e by Molmil
Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody ADI-55688
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADI-55688 heavy chain, ADI-55688 light chain, ...
著者Yuan, M, Zhu, X, Wilson, I.A.
登録日2022-02-23
公開日2022-05-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献A broad and potent neutralization epitope in SARS-related coronaviruses.
Proc.Natl.Acad.Sci.USA, 119, 2022
5K9Y
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BU of 5k9y by Molmil
Crystal structure of a thermophilic xylanase A from Bacillus subtilis 1A1 quadruple mutant Q7H/G13R/S22P/S179C
分子名称: Endo-1,4-beta-xylanase A
著者Pinheiro, M.P, Ferreira, T.L, Silva, S.R.B, Fuzo, C.A, Silva, S.R, Lourenzoni, M.R, Vieira, D.S, Ward, R.J, Nonato, M.C.
登録日2016-06-01
公開日2017-04-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The role of local residue environmental changes in thermostable mutants of the GH11 xylanase from Bacillus subtilis.
Int. J. Biol. Macromol., 97, 2017
5M1F
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BU of 5m1f by Molmil
Crystal structure of the large terminase nuclease from thermophilic phage G20c
分子名称: Phage terminase large subunit
著者Xu, R.G, Jenkins, H.T, Chechik, M, Blagova, E.V, Greive, S.J, Antson, A.A.
登録日2016-10-07
公開日2016-10-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Viral genome packaging terminase cleaves DNA using the canonical RuvC-like two-metal catalysis mechanism.
Nucleic Acids Res., 45, 2017
6Y0K
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Sulfite oxidase from Thermus thermophilus with coordinated phosphate
分子名称: (MOLYBDOPTERIN-S,S)-OXO-MOLYBDENUM, GLYCEROL, PHOSPHATE ION, ...
著者Djeghader, A, Soulimane, T.
登録日2020-02-08
公開日2020-08-05
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural evidence for a reaction intermediate mimic in the active site of a sulfite dehydrogenase.
Chem.Commun.(Camb.), 56, 2020
5M1H
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Structure of a Spumaretrovirus Gag central domain reveals an ancient retroviral capsid
分子名称: Gag protein
著者Taylor, I.A, Nicastro, G, Ball, N.
登録日2016-10-07
公開日2016-10-26
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of a Spumaretrovirus Gag Central Domain Reveals an Ancient Retroviral Capsid.
Plos Pathog., 12, 2016
5M21
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Crystal structure of hydroquinone 1,2-dioxygenase from Sphingomonas sp. TTNP3 with 4-hydroxybenzoate bound
分子名称: FE (III) ION, Hydroquinone dioxygenase large subunit, Hydroquinone dioxygenase small subunit, ...
著者Ferraroni, M, Da Vela, S, Scozzafava, A, Kolvenbach, B, Corvini, P.F.X.
登録日2016-10-11
公開日2017-09-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献The crystal structures of native hydroquinone 1,2-dioxygenase from Sphingomonas sp. TTNP3 and of substrate and inhibitor complexes.
Biochim. Biophys. Acta, 1865, 2017
6FZR
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BU of 6fzr by Molmil
Crystal structure of scFv-SM3 in complex with compound 2
分子名称: 1,2-ETHANEDIOL, 2-deoxy-2-[(fluoroacetyl)amino]-alpha-D-galactopyranose, Mucin-1, ...
著者Bermejo, I.A, Usabiaga, I, Companon, I, Castro-Lopez, J, Insausti, A, Fernandez, J.A, Avenoza, A, Busto, J.H, Jimenez-Barbero, J, Asensio, J.L, Jimenez-Oses, G, Peregrina, J.M, Hurtado-Guerrero, R, Cocinero, E.J, Corzana, F.
登録日2018-03-15
公開日2019-02-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Water Sculpts the Distinctive Shapes and Dynamics of the Tumor-Associated Carbohydrate Tn Antigens: Implications for Their Molecular Recognition.
J.Am.Chem.Soc., 140, 2018
5KA6
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HIV-1 gp41 variant Q552R and L555M resistance mutations
分子名称: Transmembrane protein gp41
著者Bhardwaj, A, Khasnis, M.D, Halkidis, K, Root, M.J.
登録日2016-06-01
公開日2016-12-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Receptor Activation of HIV-1 Env Leads to Asymmetric Exposure of the gp41 Trimer.
PLoS Pathog., 12, 2016
5M3D
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BU of 5m3d by Molmil
Structural tuning of CD81LEL (space group P31)
分子名称: 1,2-ETHANEDIOL, CD81 antigen, PHOSPHATE ION
著者Cunha, E.S, Sfriso, P, Rojas, A.L, Roversi, P, Hospital, A, Orozco, M, Abrescia, N.G.
登録日2016-10-14
公開日2016-12-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Mechanism of Structural Tuning of the Hepatitis C Virus Human Cellular Receptor CD81 Large Extracellular Loop.
Structure, 25, 2017
4WZA
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Asymmetric Nucleotide Binding in the Nitrogenase Complex
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, ADENOSINE-5'-DIPHOSPHATE, FE (III) ION, ...
著者Tezcan, F.A, Kaiser, J.T, Howard, J.B, Rees, D.C.
登録日2014-11-19
公開日2014-12-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8995 Å)
主引用文献Structural evidence for asymmetrical nucleotide interactions in nitrogenase.
J.Am.Chem.Soc., 137, 2015
7ZMW
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14-3-3s binding to non-natural peptide 2c
分子名称: 14-3-3 protein sigma, MAGNESIUM ION, non-natural peptide 1
著者Somsen, B.A, Craenmehr, F.W.B, Ottmann, C.
登録日2022-04-19
公開日2022-11-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Functional mapping of the 14-3-3 hub protein as a guide to design 14-3-3 molecular glues.
Chem Sci, 13, 2022
7TPQ
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Cryo-em structure of human prothrombinase on a nanodisc at 5.3 Angstrom resolution
分子名称: Activated factor Xa heavy chain, Coagulation factor Va, Factor X light chain
著者Di Cera, E, Ruben, E.A.
登録日2022-01-25
公開日2022-05-04
最終更新日2022-06-29
実験手法ELECTRON MICROSCOPY (5.3 Å)
主引用文献Cryo-EM structure of the prothrombin-prothrombinase complex.
Blood, 139, 2022
4WU1
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Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Rozov, A, Demeshkina, N, Yusupov, M, Yusupova, G.
登録日2014-10-30
公開日2015-06-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural insights into the translational infidelity mechanism.
Nat Commun, 6, 2015
6PVO
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Cryo-EM structure of mouse TRPV3-Y564A in putative sensitized state at 37 degrees Celsius
分子名称: Transient receptor potential cation channel subfamily V member 3
著者Singh, A.K, McGoldrick, L.L, Sobolevsky, A.I.
登録日2019-07-21
公開日2019-10-23
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (5.18 Å)
主引用文献Structural basis of temperature sensation by the TRP channel TRPV3.
Nat.Struct.Mol.Biol., 26, 2019

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