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PDB: 88675 件

8ECA
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Covalently stabilized triangular trimer derived from Abeta16-36
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, ORN-LYS-LEU-VAL-PHE-PHE-ALA-GLU-ORN-CYS-ILE-ILE-SAR-CYS-MET
著者Kreutzer, A.G, Yoo, S, Nowick, J.S.
登録日2022-09-01
公開日2023-05-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Probing differences among A beta oligomers with two triangular trimers derived from A beta.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EBZ
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Crystal Structure of GMPPNP-bound KRAS-G13D mutant at 1.2 Ang resolution
分子名称: Isoform 2B of GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Chan, A.H, Simanshu, D.K.
登録日2022-08-31
公開日2023-06-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Reduced dynamic complexity allows structure elucidation of an excited state of KRAS G13D .
Commun Biol, 6, 2023
6OLT
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Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabF, and C12-crypto Acyl Carrier Protein, AcpP
分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 2, Acyl carrier protein, N-[2-(dodecanoylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide
著者Mindrebo, J.T, Kim, W.E, Bartholow, T.G, Chen, A, Davis, T.D, La Clair, J, Burkart, M.D, Noel, J.P.
登録日2019-04-17
公開日2020-04-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Gating mechanism of elongating beta-ketoacyl-ACP synthases.
Nat Commun, 11, 2020
6OM2
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Crystal structure of atypical integrin alphaV beta8 with proTGF-beta1 ligand peptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Wang, J.C, Springer, T.A.
登録日2019-04-17
公開日2019-12-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献General structural features that regulate integrin affinity revealed by atypical alpha V beta 8.
Nat Commun, 10, 2019
8DQ2
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X-ray crystal structure of Hansschlegelia quercus lanmodulin (LanM) with lanthanum (III) bound at pH 7
分子名称: CITRIC ACID, EF-hand domain-containing protein, LANTHANUM (III) ION, ...
著者Jung, J.J, Lin, C.-Y, Boal, A.K.
登録日2022-07-18
公開日2023-06-07
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Enhanced rare-earth separation with a metal-sensitive lanmodulin dimer.
Nature, 618, 2023
6ONR
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Dehaloperoxidase B in complex with substrate 4-methyl-cresol
分子名称: 1,2-ETHANEDIOL, 2,4-dimethylphenol, DI(HYDROXYETHYL)ETHER, ...
著者Ghiladi, R.A, de Serrano, V.S, Malewschik, T.
登録日2019-04-22
公開日2019-09-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants.
Arch.Biochem.Biophys., 673, 2019
6OO1
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Dehaloperoxidase B in complex with substrate o-cresol
分子名称: 1,2-ETHANEDIOL, Dehaloperoxidase B, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Ghiladi, R.A, de Serrano, V.S, Malewschik, T.
登録日2019-04-22
公開日2020-07-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants.
Arch.Biochem.Biophys., 673, 2019
8BHB
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GABA-A receptor a5 homomer - a5V3 - RO154513
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5, ethyl 8-[(azanylidene-$l^{4}-azanylidene)amino]-5-methyl-6-oxidanylidene-4~{H}-imidazo[1,5-a][1,4]benzodiazepine-3-carboxylate
著者Miller, P.S, Malinauskas, T.M, Hardwick, S.W, Chirgadze, D.Y, Wahid, A.A.
登録日2022-10-30
公開日2023-11-01
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (2.54 Å)
主引用文献The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
6M9T
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Crystal structure of EP3 receptor bound to misoprostol-FA
分子名称: (11alpha,12alpha,13E,16S)-11,16-dihydroxy-16-methyl-9-oxoprost-13-en-1-oic acid, (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, OLEIC ACID, ...
著者Audet, M, White, K.L, Breton, B, Zarzycka, B, Han, G.W, Lu, Y, Gati, C, Batyuk, A, Popov, P, Velasquez, J, Manahan, D, Hu, H, Weierstall, U, Liu, W, Shui, W, Katrich, V, Cherezov, V, Hanson, M.A, Stevens, R.C.
登録日2018-08-24
公開日2018-12-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of misoprostol bound to the labor inducer prostaglandin E2receptor.
Nat. Chem. Biol., 15, 2019
8BHG
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GABA-A receptor a5 heteromer - a5V2 - Bretazenil
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Bretazenil, DECYL-BETA-D-MALTOPYRANOSIDE, ...
著者Miller, P.S, Malinauskas, T.M, Omari, K.E, Aricescu, A.R.
登録日2022-10-31
公開日2023-11-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BGI
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BU of 8bgi by Molmil
GABA-A receptor a5 homomer - a5V1 - Flumazenil
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5, Pregnanolone, ...
著者Miller, P.S, Malinauskas, T.M, Omari, K.E, Aricescu, A.R.
登録日2022-10-27
公開日2023-11-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8E9A
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BU of 8e9a by Molmil
Crystal structure of AsfvPolX in complex with 10-23 DNAzyme and Mg
分子名称: DNA/RNA (52-MER), MAGNESIUM ION, Repair DNA polymerase X, ...
著者Cramer, E.R, Robart, A.R, Kaya, A.I.
登録日2022-08-26
公開日2023-06-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structure of a 10-23 deoxyribozyme exhibiting a homodimer conformation.
Commun Chem, 6, 2023
6ODC
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BU of 6odc by Molmil
Crystal structure of HDAC8 in complex with compound 30
分子名称: (2E)-3-[2-(3-cyclopentyl-5,5-dimethyl-2-oxoimidazolidin-1-yl)phenyl]-N-hydroxyprop-2-enamide, 1,2-ETHANEDIOL, Histone deacetylase 8, ...
著者Zheng, X, Conti, C, Caravella, J, Zablocki, M.-M, Bair, K, Barczak, N, Han, B, Lancia Jr, D, Liu, C, Martin, M, Ng, P.Y, Rudnitskaya, A, Thomason, J.J, Garcia-Dancey, R, Hardy, C, Lahdenranta, J, Leng, C, Li, P, Pardo, E, Saldahna, A, Tan, T, Toms, A.V, Yao, L, Zhang, C.
登録日2019-03-26
公開日2020-04-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure-based Discovery of Novel N-(E)-N-Hydroxy-3-(2-(2-oxoimidazolidin-1-yl)phenyl)acrylamides as Potent and Selective HDAC8 inhibitors
To Be Published
6OC7
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BU of 6oc7 by Molmil
HMP42 Fab in complex with Protein G
分子名称: Heavy chain of HMP42 Fab, Immunoglobulin G-binding protein G, Light chain for HMP42 Fab
著者Bernard, S.M, Wilson, I.A.
登録日2019-03-22
公開日2020-02-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.296 Å)
主引用文献A generalized HIV vaccine design strategy for priming of broadly neutralizing antibody responses.
Science, 366, 2019
7A18
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50S Deinococcus radiodurans ribosome bounded with mycinamicin IV
分子名称: 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, ...
著者Breiner, E, Eyal, Z, Matzov, D, Halfon, Y, Cimicata, G, Rozenberg, H, Zimmerman, E, Bashan, A, Yonath, A.
登録日2020-08-12
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Ribosome-binding and anti-microbial studies of the mycinamicins, 16-membered macrolide antibiotics from Micromonospora griseorubida.
Nucleic Acids Res., 49, 2021
6MFL
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BU of 6mfl by Molmil
Structure of siderophore binding protein BauB bound to a complex between two molecules of acinetobactin and ferric iron.
分子名称: 1,2-ETHANEDIOL, FE (III) ION, Siderophore Binding Protein BauB, ...
著者Gulick, A.M, Bailey, D.C, Wencewicz, T.A.
登録日2018-09-11
公開日2018-11-21
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of the Siderophore Binding Protein BauB Bound to an Unusual 2:1 Complex Between Acinetobactin and Ferric Iron.
Biochemistry, 57, 2018
7A59
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Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Envelopment polyprotein, ...
著者Hellert, J, Guardado-Calvo, P, Rey, F.A.
登録日2020-08-20
公開日2021-10-06
最終更新日2022-04-20
実験手法X-RAY DIFFRACTION (2.197 Å)
主引用文献Structural basis of synergistic neutralization of Crimean-Congo hemorrhagic fever virus by human antibodies.
Science, 375, 2022
7P5Q
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BU of 7p5q by Molmil
NMR structure of a peptide deriving from SARS-CoV-2 Lineage B.1.1.7 S RBD 482-506 fragment in HFIP/H2O
分子名称: Spike glycoprotein
著者Santoro, A, Buonocore, M, Grimaldi, M, D'Ursi, A.M.
登録日2021-07-14
公開日2022-07-27
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structural analysis of a simplified model reproducing SARS-CoV-2 S RBD/ACE2 binding site.
Heliyon, 8, 2022
7A6Z
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BU of 7a6z by Molmil
Structure of P226G BlaC from Mycobacterium tuberculosis
分子名称: 1,2-ETHANEDIOL, Beta-lactamase, GLYCEROL, ...
著者Chikunova, A, Ahmad, M.U, Perrakis, A, Ubbink, M.
登録日2020-08-27
公開日2021-10-06
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Conserved proline residues prevent dimerization and aggregation in the beta-lactamase BlaC.
Protein Sci., 33, 2024
6OJ2
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Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Nguyen, H.A, Sunita, S, Dunham, C.M.
登録日2019-04-10
公開日2020-06-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Disruption of evolutionarily correlated tRNA elements impairs accurate decoding.
Proc.Natl.Acad.Sci.USA, 117, 2020
8DNT
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BU of 8dnt by Molmil
SARS-CoV-2 specific T cell receptor
分子名称: Beta-2-microglobulin, MHC class I antigen alpha chain, Nucleoprotein, ...
著者Gallagher, D.T, Wu, D, Gowthaman, R, Pierce, B.G, Mariuzza, R.A, Weng, N.P.
登録日2022-07-11
公開日2023-07-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献SARS-CoV-2 infection establishes a stable and age-independent CD8 + T cell response against a dominant nucleocapsid epitope using restricted T cell receptors.
Nat Commun, 14, 2023
7P5S
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BU of 7p5s by Molmil
NMR structure of a peptide deriving from SARS-CoV-2 Lineages P.1 and B.1.351 S RBD 482-506 fragment in HFIP/H2O
分子名称: Spike glycoprotein
著者Santoro, A, Buonocore, M, Grimaldi, M, D'Ursi, A.M.
登録日2021-07-14
公開日2022-07-27
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structural analysis of a simplified model reproducing SARS-CoV-2 S RBD/ACE2 binding site.
Heliyon, 8, 2022
7P5G
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BU of 7p5g by Molmil
NMR structure of a peptide deriving from SARS-CoV-2 S RBD 482-506 fragment in HFIP/H2O
分子名称: Spike glycoprotein
著者Santoro, A, Buonocore, M, Grimaldi, M, D'Ursi, A.M.
登録日2021-07-14
公開日2022-07-27
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structural analysis of a simplified model reproducing SARS-CoV-2 S RBD/ACE2 binding site.
Heliyon, 8, 2022
6O4B
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BU of 6o4b by Molmil
Structure of ALDH7A1 mutant W175G complexed with NAD
分子名称: 1,2-ETHANEDIOL, Alpha-aminoadipic semialdehyde dehydrogenase, CHLORIDE ION, ...
著者Tanner, J.J, Korasick, D.A, Laciak, A.R.
登録日2019-02-28
公開日2019-07-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and biochemical consequences of pyridoxine-dependent epilepsy mutations that target the aldehyde binding site of aldehyde dehydrogenase ALDH7A1.
Febs J., 287, 2020
7PHP
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BU of 7php by Molmil
Structure of Multidrug and Toxin Compound Extrusion (MATE) transporter NorM by NabFab-fiducial assisted cryo-EM
分子名称: Anti-Fab nanobody, Multidrug resistance protein NorM, NabFab HC, ...
著者Bloch, J.S, Mukherjee, S, Kowal, J, Niederer, M, Pardon, E, Steyaert, J, Kossiakoff, A.A, Locher, K.P.
登録日2021-08-18
公開日2021-09-01
最終更新日2021-12-01
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Development of a universal nanobody-binding Fab module for fiducial-assisted cryo-EM studies of membrane proteins.
Proc.Natl.Acad.Sci.USA, 118, 2021

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