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3TL0
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BU of 3tl0 by Molmil
Structure of SHP2 N-SH2 domain in complex with RLNpYAQLWHR peptide
Descriptor: RLNpYAQLWHR peptide, SULFATE ION, Tyrosine-protein phosphatase non-receptor type 11
Authors:Zhang, Y, Zhang, J, Yuan, C, Hard, R.L, Park, I.H, Li, C, Bell, C.E, Pei, D.
Deposit date:2011-08-29
Release date:2011-09-28
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Simultaneous binding of two peptidyl ligands by a SRC homology 2 domain.
Biochemistry, 50, 2011
3LBS
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BU of 3lbs by Molmil
Crystal structure of the cytoplasmic tail of (pro)renin receptor as a MBP fusion (Maltose-bound form)
Descriptor: Maltose-binding periplasmic protein, Renin receptor, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Zhang, Y, Garavito, R.M.
Deposit date:2010-01-08
Release date:2011-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural analysis of the intracellular domain of (pro)renin receptor fused to maltose-binding protein.
Biochem.Biophys.Res.Commun., 407, 2011
3LZC
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BU of 3lzc by Molmil
Crystal structure of Dph2 from Pyrococcus horikoshii
Descriptor: Dph2
Authors:Zhang, Y, Zhu, X, Torelli, A.T, Lee, M, Dzikovski, B, Koralewski, R.M, Wang, E, Freed, J, Krebs, C, Lin, H, Ealick, S.E.
Deposit date:2010-03-01
Release date:2010-06-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.261 Å)
Cite:Diphthamide biosynthesis requires an organic radical generated by an iron-sulphur enzyme.
Nature, 465, 2010
5JKJ
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BU of 5jkj by Molmil
Crystal structure of esterase E22 L374D mutant
Descriptor: Esterase E22
Authors:Zhang, Y, Wang, P, Yao, Q.
Deposit date:2016-04-26
Release date:2017-04-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for substrate recognition and catalysis of a novel esterase E22 with a homoserine transacetylase-like fold
To Be Published
5JKF
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BU of 5jkf by Molmil
Crystal structure of esterase E22
Descriptor: Esterase E22
Authors:Zhang, Y, Wang, P, Yao, Q.
Deposit date:2016-04-26
Release date:2017-04-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.393 Å)
Cite:Structural basis for substrate recognition and catalysis of a novel esterase E22 with a homoserine transacetylase-like fold
To Be Published
3PQE
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BU of 3pqe by Molmil
Crystal structure of L-lactate dehydrogenase from Bacillus subtilis with H171C mutation
Descriptor: L-lactate dehydrogenase
Authors:Zhang, Y, Garavito, R.M.
Deposit date:2010-11-26
Release date:2011-12-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of L-lactate dehydrogenase from Bacillus subtilis with H171C mutation
To be Published
3PQF
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BU of 3pqf by Molmil
Crystal structure of L-lactate dehydrogenase from Bacillus subtilis mutation H171C complexed with NAD+
Descriptor: L-lactate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Zhang, Y, Garavito, R.M.
Deposit date:2010-11-26
Release date:2012-01-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structure of L-lactate dehydrogenase from Bacillus subtilis mutation H171C complexed with NAD+
To be Published
3PME
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BU of 3pme by Molmil
Crystal structure of the receptor binding domain of botulinum neurotoxin C/D mosaic serotype
Descriptor: GLYCEROL, SULFATE ION, Type C neurotoxin
Authors:Zhang, Y, Buchko, G.W, Qin, L, Robinson, H, Varnum, S.M, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2010-11-16
Release date:2010-12-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Crystal structure of the receptor binding domain of the botulinum C-D mosaic neurotoxin reveals potential roles of lysines 1118 and 1136 in membrane interactions.
Biochem.Biophys.Res.Commun., 404, 2011
3PQD
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BU of 3pqd by Molmil
Crystal structure of L-lactate dehydrogenase from Bacillus subtilis complexed with FBP and NAD+
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, L-lactate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Zhang, Y, Garavito, R.M.
Deposit date:2010-11-26
Release date:2012-01-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.376 Å)
Cite:Crystal structure of L-lactate dehydrogenase from Bacillus subtilis complexed with FBP and NAD+
To be Published
7ESD
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BU of 7esd by Molmil
Mature Donggang virus
Descriptor: Genome polyprotein
Authors:Zhang, Y, Liang, D.
Deposit date:2021-05-10
Release date:2022-05-18
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Replication is the key barrier during the dual-host adaptation of mosquito-borne flaviviruses.
Proc.Natl.Acad.Sci.USA, 119, 2022
7TXL
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BU of 7txl by Molmil
Crystal structure of EgtU solute binding domain from Streptococcus pneumoniae D39 in complex with L-ergothioneine
Descriptor: 1,2-ETHANEDIOL, Choline transporter (Glycine betaine transport system permease protein), trimethyl-[(2S)-1-oxidanyl-1-oxidanylidene-3-(2-sulfanylidene-1,3-dihydroimidazol-4-yl)propan-2-yl]azanium
Authors:Zhang, Y, Gonzalez-Gutierrez, G, Giedroc, D.P.
Deposit date:2022-02-09
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Discovery and structure of a widespread bacterial ABC transporter specific for ergothioneine.
Nat Commun, 13, 2022
7TXK
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BU of 7txk by Molmil
Crystal structure of EgtU solute binding domain from Streptococcus pneumoniae D39 in complex with L-ergothioneine
Descriptor: 1,2-ETHANEDIOL, Choline transporter (Glycine betaine transport system permease protein), SULFATE ION, ...
Authors:Zhang, Y, Gonzalez-Gutierrez, G, Giedroc, D.P.
Deposit date:2022-02-09
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Discovery and structure of a widespread bacterial ABC transporter specific for ergothioneine.
Nat Commun, 13, 2022
3T94
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BU of 3t94 by Molmil
Crystal structure of 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP) II complexed with 5'-deoxy-5'-methylthioadenosine and sulfate
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, 5'-methylthioadenosine phosphorylase (MtaP), SULFATE ION
Authors:Zhang, Y, Ealick, S.E.
Deposit date:2011-08-02
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.452 Å)
Cite:A corrected space group for Sulfolobus sulfataricus 5'-deoxy-5'-methylthioadenosine phosphorylase II.
Acta Crystallogr.,Sect.D, 68, 2012
5T0X
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BU of 5t0x by Molmil
Solution NMR-derived structure of calmodulin bound with ER alpha peptides
Descriptor: CALCIUM ION, Calmodulin, Estrogen receptor peptide
Authors:Zhang, Y, Ames, J.B.
Deposit date:2016-08-16
Release date:2017-02-15
Method:SOLUTION NMR
Cite:Solution NMR-derived structure of calmodulin bound with ER alpha peptides
To Be Published
5UQ7
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BU of 5uq7 by Molmil
70S ribosome complex with dnaX mRNA stemloop and E-site tRNA ("in" conformation)
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Zhang, Y, Hong, S, Skiniotis, G, Dunham, C.M.
Deposit date:2017-02-07
Release date:2018-03-07
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Alternative Mode of E-Site tRNA Binding in the Presence of a Downstream mRNA Stem Loop at the Entrance Channel.
Structure, 26, 2018
5V21
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BU of 5v21 by Molmil
Crystal structure of human SETD2 SET-domain in complex with H3K36M peptide and SAM
Descriptor: Histone H3K36M peptide, Histone-lysine N-methyltransferase SETD2, S-ADENOSYLMETHIONINE, ...
Authors:Zhang, Y, Tong, L.
Deposit date:2017-03-02
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.415 Å)
Cite:Molecular basis for the role of oncogenic histone mutations in modulating H3K36 methylation.
Sci Rep, 7, 2017
5VAI
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BU of 5vai by Molmil
Cryo-EM structure of the activated Glucagon-like peptide-1 receptor in complex with G protein
Descriptor: Glucagon-like peptide 1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhang, Y, Sun, B, Feng, D, Hu, H, Chu, M, Qu, Q, Tarrasch, J.T, Li, S, Kobilka, T.S, Kobilka, B.K, Skiniotis, G.
Deposit date:2017-03-27
Release date:2017-05-24
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of the activated GLP-1 receptor in complex with a G protein.
Nature, 546, 2017
5V22
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BU of 5v22 by Molmil
Crystal structure of human SETD2 SET-domain in complex with H3K36M peptide and SAH
Descriptor: Histone H3K36M peptide, Histone-lysine N-methyltransferase SETD2, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Zhang, Y, Tong, L.
Deposit date:2017-03-02
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis for the role of oncogenic histone mutations in modulating H3K36 methylation.
Sci Rep, 7, 2017
5UQ8
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BU of 5uq8 by Molmil
70S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ("out" conformation)
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Zhang, Y, Hong, S, Skiniotis, G, Dunham, C.M.
Deposit date:2017-02-07
Release date:2018-03-07
Last modified:2018-03-21
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Alternative Mode of E-Site tRNA Binding in the Presence of a Downstream mRNA Stem Loop at the Entrance Channel.
Structure, 26, 2018
6M0W
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BU of 6m0w by Molmil
Crystal structure of Streptococcus thermophilus Cas9 in complex with the AGAA PAM
Descriptor: CRISPR-associated endonuclease Cas9 1, DNA (28-MER), DNA (5'-D(*AP*AP*AP*GP*AP*AP*GP*C)-3'), ...
Authors:Zhang, Y, Zhang, H, Xu, X, Wang, Y, Chen, W, Wang, Y, Wu, Z, Tang, N, Wang, Y, Zhao, S, Gan, J, Ji, Q.
Deposit date:2020-02-23
Release date:2020-09-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Catalytic-state structure and engineering of Streptococcus thermophilus Cas9
Nat Catal, 2020
6M0X
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BU of 6m0x by Molmil
Crystal structure of Streptococcus thermophilus Cas9 in complex with AGGA PAM
Descriptor: BARIUM ION, CRISPR-associated endonuclease Cas9 1, DNA (28-MER), ...
Authors:Zhang, Y, Zhang, H, Xu, X, Wang, Y, Chen, W, Wang, Y, Wu, Z, Tang, N, Wang, Y, Zhao, S, Gan, J, Ji, Q.
Deposit date:2020-02-23
Release date:2020-09-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.561 Å)
Cite:Catalytic-state structure and engineering of Streptococcus thermophilus Cas9
Nat Catal, 2020
6M0V
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BU of 6m0v by Molmil
Crsytal structure of streptococcus thermophilus Cas9 in complex with the GGAA PAM
Descriptor: BARIUM ION, CRISPR-associated endonuclease Cas9 1, DNA (28-MER), ...
Authors:Zhang, Y, Zhang, H, Xu, X, Wang, Y, Chen, W, Wang, Y, Wu, Z, Tang, N, Wang, Y, Zhao, S, Gan, J, Ji, Q.
Deposit date:2020-02-22
Release date:2020-09-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Catalytic-state structure and engineering of Streptococcus thermophilus Cas9
Nat Catal, 2020
4F83
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BU of 4f83 by Molmil
Crystal structure of the receptor binding domain of botulinum neurotoxin mosaic serotype C/D with a tetraethylene glycol molecule bound on the Hcn sub-domain and a sulfate ion at the putative active site
Descriptor: GLYCEROL, SULFATE ION, TETRAETHYLENE GLYCOL, ...
Authors:Zhang, Y, Buchko, G.W, Gardberg, A, Edwards, T.E, Sankaran, B, Robinson, H, Varnum, S.M, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-05-16
Release date:2012-06-20
Last modified:2013-06-12
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into the functional role of the Hcn sub-domain of the receptor-binding domain of the botulinum neurotoxin mosaic serotype C/D.
Biochimie, 95, 2013
8ISJ
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BU of 8isj by Molmil
Pr conformer of Arabidopsis thaliana phytochrome A - AtphyA-Pr
Descriptor: 3-[5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, Phytochrome A
Authors:Zhang, Y, Ma, C, Zhao, J, Gao, N, Wang, J.
Deposit date:2023-03-20
Release date:2023-08-09
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insights into plant phytochrome A as a highly sensitized photoreceptor.
Cell Res., 33, 2023
8ISI
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BU of 8isi by Molmil
Photochromobilin-free form of Arabidopsis thaliana phytochrome A - apo-AtphyA
Descriptor: Phytochrome A
Authors:Zhang, Y, Ma, C, Zhao, J, Gao, N, Wang, J.
Deposit date:2023-03-20
Release date:2023-08-09
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Structural insights into plant phytochrome A as a highly sensitized photoreceptor.
Cell Res., 33, 2023

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