8JOZ
 
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6DT0
 | | Cryo-EM structure of a mitochondrial calcium uniporter | | 分子名称: | CALCIUM ION, Mitochondrial calcium uniporter | | 著者 | Yoo, J, Wu, M, Yin, Y, Herzik, M.A.J, Lander, G.C, Lee, S.-Y. | | 登録日 | 2018-06-14 | | 公開日 | 2018-07-11 | | 最終更新日 | 2024-03-13 | | 実験手法 | ELECTRON MICROSCOPY (3.7 Å) | | 主引用文献 | Cryo-EM structure of a mitochondrial calcium uniporter.
Science, 361, 2018
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6BW5
 | | Human GPT (DPAGT1) in complex with tunicamycin | | 分子名称: | (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, Tunicamycin, UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase | | 著者 | Yoo, J, Kuk, A.C.Y, Mashalidis, E.H, Lee, S.-Y. | | 登録日 | 2017-12-14 | | 公開日 | 2018-02-21 | | 最終更新日 | 2023-10-04 | | 実験手法 | X-RAY DIFFRACTION (3.1 Å) | | 主引用文献 | GlcNAc-1-P-transferase-tunicamycin complex structure reveals basis for inhibition of N-glycosylation.
Nat. Struct. Mol. Biol., 25, 2018
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6BW6
 | | Human GPT (DPAGT1) H129 variant in complex with tunicamycin | | 分子名称: | (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, Tunicamycin, UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase | | 著者 | Yoo, J, Kuk, A.C.Y, Mashalidis, E.H, Lee, S.-Y. | | 登録日 | 2017-12-14 | | 公開日 | 2018-02-21 | | 最終更新日 | 2023-10-04 | | 実験手法 | X-RAY DIFFRACTION (2.95 Å) | | 主引用文献 | GlcNAc-1-P-transferase-tunicamycin complex structure reveals basis for inhibition of N-glycosylation.
Nat. Struct. Mol. Biol., 25, 2018
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4ZG0
 | | Crystal structure of Mouse Syndesmos protein | | 分子名称: | Protein syndesmos | | 著者 | Lee, I, Kim, H, Yoo, J, Cho, H, Lee, W. | | 登録日 | 2015-04-22 | | 公開日 | 2016-04-20 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2.006 Å) | | 主引用文献 | Crystal structure of syndesmos and its interaction with Syndecan-4 proteoglycan
Biochem.Biophys.Res.Commun., 463, 2015
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2XHS
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4UV7
 | | The complex structure of extracellular domain of EGFR and GC1118A | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, EPIDERMAL GROWTH FACTOR RECEPTOR, ... | | 著者 | Yoo, J.H, Cho, H.S. | | 登録日 | 2014-08-05 | | 公開日 | 2015-10-14 | | 最終更新日 | 2024-01-10 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Gc1118, an Anti-Egfr Antibody with a Distinct Binding Epitope and Superior Inhibitory Activity Against High-Affinity Egfr Ligands.
Mol.Cancer Ther., 15, 2016
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4BFM
 | | The crystal structure of mouse PK38 | | 分子名称: | MATERNAL EMBRYONIC LEUCINE ZIPPER KINASE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SULFATE ION | | 著者 | Yoo, J.H, Cho, Y.S, Park, S.M, Cho, H.S. | | 登録日 | 2013-03-21 | | 公開日 | 2014-02-12 | | 最終更新日 | 2023-12-20 | | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | | 主引用文献 | The Structures of the Kinase Domain and Uba Domain of Mpk38 Suggest the Activation Mechanism for Kinase Activity.
Acta Crystallogr.,Sect.D, 70, 2014
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8DEP
 | | Cryo-EM structure of the human reduced folate carrier, apo condition | | 分子名称: | Digitonin, Reduced folate transporter,Soluble cytochrome b562 | | 著者 | Wright, N.J, Fedor, J.G, Lee, S.-Y. | | 登録日 | 2022-06-21 | | 公開日 | 2022-09-21 | | 最終更新日 | 2022-10-12 | | 実験手法 | ELECTRON MICROSCOPY (3.6 Å) | | 主引用文献 | Methotrexate recognition by the human reduced folate carrier SLC19A1.
Nature, 609, 2022
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7TX7
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7TX6
 | | Cryo-EM structure of the human reduced folate carrier in complex with methotrexate | | 分子名称: | Digitonin, METHOTREXATE, Reduced folate transporter,Soluble cytochrome b562 | | 著者 | Wright, N.J, Fedor, J.G, Lee, S.-Y. | | 登録日 | 2022-02-07 | | 公開日 | 2022-09-21 | | 最終更新日 | 2024-03-13 | | 実験手法 | ELECTRON MICROSCOPY (3.3 Å) | | 主引用文献 | Methotrexate recognition by the human reduced folate carrier SLC19A1.
Nature, 609, 2022
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4XZZ
 | | Structure of Helicobacter pylori Csd6 in the ligand-free state | | 分子名称: | Conserved hypothetical secreted protein, GLYCEROL | | 著者 | Kim, H.S, Im, H.N, Yoon, H.J, Suh, S.W. | | 登録日 | 2015-02-05 | | 公開日 | 2015-09-02 | | 最終更新日 | 2022-03-23 | | 実験手法 | X-RAY DIFFRACTION (2.03 Å) | | 主引用文献 | The Cell Shape-determining Csd6 Protein from Helicobacter pylori Constitutes a New Family of l,d-Carboxypeptidase
J.Biol.Chem., 290, 2015
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4Y4V
 | | Structure of Helicobacter pylori Csd6 in the D-Ala-bound state | | 分子名称: | Conserved hypothetical secreted protein, D-ALANINE, GLYCEROL | | 著者 | Kim, H.S, Im, H.N, Yoon, H.J, Suh, S.W. | | 登録日 | 2015-02-11 | | 公開日 | 2015-09-02 | | 最終更新日 | 2022-03-23 | | 実験手法 | X-RAY DIFFRACTION (2.04 Å) | | 主引用文献 | The Cell Shape-determining Csd6 Protein from Helicobacter pylori Constitutes a New Family of l,d-Carboxypeptidase
J.Biol.Chem., 290, 2015
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8HKP
 | | Structurally hetero-junctional human Cx36/GJD2 gap junction channel in detergents (C6 symmetry) | | 分子名称: | Gap junction delta-2 protein, Lauryl Maltose Neopentyl Glycol | | 著者 | Lee, S.N, Cho, H.J, Jeong, H, Ryu, B, Lee, H.J, Lee, H.H, Woo, J.S. | | 登録日 | 2022-11-27 | | 公開日 | 2023-03-22 | | 最終更新日 | 2023-12-13 | | 実験手法 | ELECTRON MICROSCOPY (3.6 Å) | | 主引用文献 | Cryo-EM structures of human Cx36/GJD2 neuronal gap junction channel.
Nat Commun, 14, 2023
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6L3T
 | | Human Cx31.3/GJC3 connexin hemichannel in the absence of calcium | | 分子名称: | Gap junction gamma-3 protein, Lauryl Maltose Neopentyl Glycol | | 著者 | Lee, H.J, Jeong, H, Ryu, B, Hyun, J, Woo, J.S. | | 登録日 | 2019-10-15 | | 公開日 | 2020-09-09 | | 最終更新日 | 2020-10-14 | | 実験手法 | ELECTRON MICROSCOPY (2.34 Å) | | 主引用文献 | Cryo-EM structure of human Cx31.3/GJC3 connexin hemichannel.
Sci Adv, 6, 2020
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6L3V
 | | The R15G mutant of human Cx31.3/GJC3 connexin hemichannel | | 分子名称: | Gap junction gamma-3 protein, Lauryl Maltose Neopentyl Glycol | | 著者 | Lee, H.J, Jeong, H, Ryu, B, Hyun, J, Woo, J.S. | | 登録日 | 2019-10-15 | | 公開日 | 2020-09-09 | | 最終更新日 | 2020-10-14 | | 実験手法 | ELECTRON MICROSCOPY (2.63 Å) | | 主引用文献 | Cryo-EM structure of human Cx31.3/GJC3 connexin hemichannel.
Sci Adv, 6, 2020
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6L3U
 | | Human Cx31.3/GJC3 connexin hemichannel in the presence of calcium | | 分子名称: | CALCIUM ION, Gap junction gamma-3 protein, Lauryl Maltose Neopentyl Glycol | | 著者 | Lee, H.J, Jeong, H, Ryu, B, Hyun, J, Woo, J.S. | | 登録日 | 2019-10-15 | | 公開日 | 2020-09-09 | | 最終更新日 | 2020-10-14 | | 実験手法 | ELECTRON MICROSCOPY (2.53 Å) | | 主引用文献 | Cryo-EM structure of human Cx31.3/GJC3 connexin hemichannel.
Sci Adv, 6, 2020
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5G1E
 | | The complex structure of syntenin-1 PDZ domain with c-terminal extension | | 分子名称: | SYNTENIN-1 | | 著者 | Lee, I, Kim, H, Yun, J.H, Lee, W. | | 登録日 | 2016-03-25 | | 公開日 | 2016-11-23 | | 最終更新日 | 2017-07-12 | | 実験手法 | X-RAY DIFFRACTION (1.92 Å) | | 主引用文献 | New Structural Insight of C-Terminal Region of Syntenin-1, Enhancing the Molecular Dimerization and Inhibitory Function Related on Syndecan-4 Signaling.
Sci.Rep., 6, 2016
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5G1D
 | | The complex structure of syntenin-1 PDZ domain with c-terminal extension | | 分子名称: | SYNDECAN-4, SYNTENIN-1 | | 著者 | Lee, I, Kim, H, Yun, J.H, Lee, W. | | 登録日 | 2016-03-25 | | 公開日 | 2016-11-23 | | 最終更新日 | 2017-07-12 | | 実験手法 | X-RAY DIFFRACTION (2.81 Å) | | 主引用文献 | New Structural Insight of C-Terminal Region of Syntenin-1, Enhancing the Molecular Dimerization and Inhibitory Function Related on Syndecan-4 Signaling.
Sci.Rep., 6, 2016
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2RL2
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2RL1
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7F93
 | | Structure of connexin43/Cx43/GJA1 gap junction intercellular channel in nanodiscs with soybean lipids at pH ~8.0 | | 分子名称: | Gap junction alpha-1 protein, TETRADECANE | | 著者 | Lee, H.J, Cha, H.J, Jeong, H, Lee, S.N, Lee, C.W, Woo, J.S. | | 登録日 | 2021-07-03 | | 公開日 | 2022-07-06 | | 最終更新日 | 2023-05-03 | | 実験手法 | ELECTRON MICROSCOPY (3.6 Å) | | 主引用文献 | Conformational changes in the human Cx43/GJA1 gap junction channel visualized using cryo-EM.
Nat Commun, 14, 2023
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7F94
 | | Structure of C-terminal truncated connexin43/Cx43/GJA1 gap junction intercellular channel with two conformationally different hemichannels | | 分子名称: | A C-terminal deletion mutant of gap junction alpha-1 protein (Cx43-M257) | | 著者 | Lee, H.J, Cha, H.J, Jeong, H, Lee, S.N, Lee, C.W, Woo, J.S. | | 登録日 | 2021-07-03 | | 公開日 | 2022-07-06 | | 最終更新日 | 2023-05-03 | | 実験手法 | ELECTRON MICROSCOPY (3.6 Å) | | 主引用文献 | Conformational changes in the human Cx43/GJA1 gap junction channel visualized using cryo-EM.
Nat Commun, 14, 2023
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7F92
 | | Structure of connexin43/Cx43/GJA1 gap junction intercellular channel in LMNG/CHS detergents at pH ~8.0 | | 分子名称: | Gap junction alpha-1 protein, TETRADECANE | | 著者 | Lee, H.J, Cha, H.J, Jeong, H, Lee, S.N, Lee, C.W, Woo, J.S. | | 登録日 | 2021-07-03 | | 公開日 | 2022-07-06 | | 最終更新日 | 2023-05-03 | | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | | 主引用文献 | Conformational changes in the human Cx43/GJA1 gap junction channel visualized using cryo-EM.
Nat Commun, 14, 2023
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3SWE
 | | Haemophilus influenzae MurA in complex with UDP-N-acetylmuramic acid and covalent adduct of PEP with Cys117 | | 分子名称: | (2R)-2-{[(2R,3R,4R,5S,6R)-3-(acetylamino)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}propanoic acid, GLYCEROL, SULFATE ION, ... | | 著者 | Zhu, J.-Y, Schonbrunn, E. | | 登録日 | 2011-07-13 | | 公開日 | 2012-03-14 | | 最終更新日 | 2023-12-06 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Functional Consequence of Covalent Reaction of Phosphoenolpyruvate with UDP-N-acetylglucosamine 1-Carboxyvinyltransferase (MurA).
J.Biol.Chem., 287, 2012
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