Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5GRX
DownloadVisualize
BU of 5grx by Molmil
Crystal structure of disulfide-bonded diabody
分子名称: diabody protein
著者Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O.
登録日2016-08-12
公開日2016-10-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
7V5C
DownloadVisualize
BU of 7v5c by Molmil
Cryo-EM structure of the mouse ABCB9 (ADP.BeF3-bound)
分子名称: ABC-type oligopeptide transporter ABCB9, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
著者Park, J.G, Kim, S, Jang, E, Choi, S.H, Han, H, Kim, J.W, Ju, S, Min, D.S, Jin, M.S.
登録日2021-08-17
公開日2022-10-19
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献The lysosomal transporter TAPL has a dual role as peptide translocator and phosphatidylserine floppase.
Nat Commun, 13, 2022
7V5D
DownloadVisualize
BU of 7v5d by Molmil
Cryo-EM structure of the mouse ABCB9 (PG-bound)
分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, ABC-type oligopeptide transporter ABCB9
著者Park, J.G, Kim, S, Jang, E, Choi, S.H, Han, H, Ju, S, Kim, J.W, Min, D.S, Jin, M.S.
登録日2021-08-17
公開日2022-10-19
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The lysosomal transporter TAPL has a dual role as peptide translocator and phosphatidylserine floppase.
Nat Commun, 13, 2022
7VFI
DownloadVisualize
BU of 7vfi by Molmil
Cryo-EM structure of the mouse TAPL (9mer-peptide bound)
分子名称: ABC-type oligopeptide transporter ABCB9, ARG-ARG-TYR-GLN-LYS-SER-THR-GLU-LEU, CHOLESTEROL HEMISUCCINATE
著者Park, J.G, Kim, S, Jang, E, Choi, S.H, Han, H, Kim, J.W, Ju, S, Min, D.S, Jin, M.S.
登録日2021-09-13
公開日2022-10-19
実験手法ELECTRON MICROSCOPY (3.98 Å)
主引用文献The lysosomal transporter TAPL has a dual role as peptide translocator and phosphatidylserine floppase.
Nat Commun, 13, 2022
7YC5
DownloadVisualize
BU of 7yc5 by Molmil
Cryo-EM structure of SARS-CoV-2 spike in complex with K202.B bispecific antibody
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain from K202.B, bispecific antibody, ...
著者Yoo, Y, Cho, H.S.
登録日2022-06-30
公開日2023-07-05
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Novel bispecific human antibody platform specifically targeting a fully open spike conformation potently neutralizes multiple SARS-CoV-2 variants.
Antiviral Res., 212, 2023
7CM4
DownloadVisualize
BU of 7cm4 by Molmil
Crystal Structure of COVID-19 virus spike receptor-binding domain complexed with a neutralizing antibody CT-P59
分子名称: 1,2-ETHANEDIOL, IgG heavy chain, IgG light chain, ...
著者Kim, Y.G, Jeong, J.H, Bae, J.S, Lee, J.
登録日2020-07-24
公開日2021-01-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献A therapeutic neutralizing antibody targeting receptor binding domain of SARS-CoV-2 spike protein.
Nat Commun, 12, 2021
7CT6
DownloadVisualize
BU of 7ct6 by Molmil
Crystal structure of GCL from Deinococcus metallilatus
分子名称: Glyoxylate carboligase
著者Kim, J.H, Kim, J.S.
登録日2020-08-18
公開日2021-08-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Glyoxylate carboligase-based whole-cell biotransformation of formaldehyde into ethylene glycol via glycolaldehyde.
Green Chem, 1, 2022
7EEW
DownloadVisualize
BU of 7eew by Molmil
Crystal structure of the intact MTase from Vibrio vulnificus YJ016 in complex with the DNA-mimicking Ocr protein and the S-adenosyl-L-homocysteine (SAH)
分子名称: Overcome classical restriction gp0.3, S-ADENOSYL-L-HOMOCYSTEINE, Type I restriction-modification system methyltransferase subunit
著者Seo, P.W, Park, S.Y, Kim, J.S.
登録日2021-03-19
公開日2022-03-23
最終更新日2022-07-13
実験手法X-RAY DIFFRACTION (2.896 Å)
主引用文献Structural features of a minimal intact methyltransferase of a type I restriction-modification system.
Int.J.Biol.Macromol., 208, 2022
8GTI
DownloadVisualize
BU of 8gti by Molmil
Corticotropin-releasing hormone receptor 1(CRF1R) bound with BMK-C205 by XFEL
分子名称: 8-(4-bromanyl-2,6-dimethoxy-phenyl)-~{N}-butyl-~{N}-(cyclopropylmethyl)-2,7-dimethyl-pyrazolo[1,5-a][1,3,5]triazin-4-amine, Endolysin, Isoform CRF-R2 of Corticotropin-releasing factor receptor 1, ...
著者Cho, H.S, Kim, H.
登録日2022-09-08
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-based drug discovery of a corticotropin-releasing hormone receptor 1 antagonist using an X-ray free-electron laser.
Exp.Mol.Med., 55, 2023
8GTM
DownloadVisualize
BU of 8gtm by Molmil
Corticotropin-releasing hormone receptor 1(CRF1R) bound with BMK-C203 by XFEL
分子名称: 7-(4-bromanyl-2,6-dimethoxy-phenyl)-4,8-dimethyl-~{N},~{N}-bis[4,4,4-tris(fluoranyl)butyl]-1$l^{4},3,5,9-tetrazabicyclo[4.3.0]nona-1(6),2,4,8-tetraen-2-amine, Endolysin, Isoform CRF-R2 of Corticotropin-releasing factor receptor 1
著者Cho, H.S, Kim, H.
登録日2022-09-08
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-based drug discovery of a corticotropin-releasing hormone receptor 1 antagonist using an X-ray free-electron laser.
Exp.Mol.Med., 55, 2023
8GTG
DownloadVisualize
BU of 8gtg by Molmil
Corticotropin-releasing hormone receptor 1(CRF1R) bound with BMK-I-152 by XFEL
分子名称: 8-(4-bromanyl-2,6-dimethoxy-phenyl)-~{N},~{N}-bis(2-methoxyethyl)-2,7-dimethyl-pyrazolo[1,5-a][1,3,5]triazin-4-amine, Endolysin, Isoform CRF-R2 of Corticotropin-releasing factor receptor 1
著者Cho, H.S, Kim, H.
登録日2022-09-08
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structure-based drug discovery of a corticotropin-releasing hormone receptor 1 antagonist using an X-ray free-electron laser.
Exp.Mol.Med., 55, 2023
8I08
DownloadVisualize
BU of 8i08 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase quadruple mutant
分子名称: 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
著者Kim, J.H, Kim, J.S.
登録日2023-01-10
公開日2023-11-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose.
Int.J.Biol.Macromol., 253, 2023
8I07
DownloadVisualize
BU of 8i07 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase double mutant in complex with glycolaldehyde
分子名称: 2-oxidanylethanal, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
著者Kim, J.H, Kim, J.S.
登録日2023-01-10
公開日2023-11-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose.
Int.J.Biol.Macromol., 253, 2023
8I01
DownloadVisualize
BU of 8i01 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase
分子名称: 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
著者Kim, J.H, Kim, J.S.
登録日2023-01-10
公開日2023-11-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose.
Int.J.Biol.Macromol., 253, 2023
8I05
DownloadVisualize
BU of 8i05 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase double mutant
分子名称: 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
著者Kim, J.H, Kim, J.S.
登録日2023-01-10
公開日2023-11-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose.
Int.J.Biol.Macromol., 253, 2023
6JDK
DownloadVisualize
BU of 6jdk by Molmil
Crystal structure of Baeyer-Villiger monooxygenase from Parvibaculum lavamentivorans
分子名称: Baeyer-Villiger monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION
著者Kim, J.-S, Nguyen, T.D.
登録日2019-02-01
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.495 Å)
主引用文献Structural basis for the selective addition of an oxygen atom to cyclic ketones by Baeyer-Villiger monooxygenase from Parvibaculum lavamentivorans.
Biochem. Biophys. Res. Commun., 512, 2019
2XMQ
DownloadVisualize
BU of 2xmq by Molmil
Crystal structure of human NDRG2 protein provides insight into its role as a tumor suppressor
分子名称: ACETATE ION, PROTEIN NDRG2
著者Hwang, J, Kim, Y, Lee, H, Kim, M.H.
登録日2010-07-29
公開日2011-01-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Crystal Structure of Human Ndrg2 Protein Provides Insight Into its Role as a Tumor Suppressor.
J.Biol.Chem., 286, 2011
2XMR
DownloadVisualize
BU of 2xmr by Molmil
Crystal structure of human NDRG2 protein provides insight into its role as a tumor suppressor
分子名称: ACETATE ION, CALCIUM ION, GLYCEROL, ...
著者Hwang, J, Kim, Y, Lee, H, Kim, M.H.
登録日2010-07-29
公開日2011-01-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Human Ndrg2 Protein Provides Insight Into its Role as a Tumor Suppressor.
J.Biol.Chem., 286, 2011
2XMS
DownloadVisualize
BU of 2xms by Molmil
Crystal structure of human NDRG2 protein provides insight into its role as a tumor suppressor
分子名称: CHLORIDE ION, IMIDAZOLE, PROTEIN NDRG2
著者Hwang, J, Kim, Y, Lee, H, Kim, M.H.
登録日2010-07-29
公開日2011-01-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal Structure of Human Ndrg2 Protein Provides Insight Into its Role as a Tumor Suppressor.
J.Biol.Chem., 286, 2011
2QMQ
DownloadVisualize
BU of 2qmq by Molmil
Crystal structure of a n-myc downstream regulated 2 protein (ndrg2, syld, ndr2, ai182517, au040374) from mus musculus at 1.70 A resolution
分子名称: BENZOIC ACID, MAGNESIUM ION, NONAETHYLENE GLYCOL, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2007-07-16
公開日2007-09-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of the human N-Myc downstream-regulated gene 2 protein provides insight into its role as a tumor suppressor.
J.Biol.Chem., 286, 2011
5GRU
DownloadVisualize
BU of 5gru by Molmil
Structure of mono-specific diabody
分子名称: Maltose-binding periplasmic protein, diabody protein
著者Kim, J.H, Song, D.H, Youn, S.J, Cho, G, Lee, H, Lee, J.O.
登録日2016-08-12
公開日2016-10-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.955 Å)
主引用文献Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
6KMA
DownloadVisualize
BU of 6kma by Molmil
Crystal structure of SucA with glycolaldehyde-1-13C from Vibrio vulnificus
分子名称: 2-oxidanylethanal, CALCIUM ION, HEXAETHYLENE GLYCOL, ...
著者Seo, P.W, Kim, J.S.
登録日2019-07-31
公開日2020-08-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.282 Å)
主引用文献Understanding the molecular properties of the E1 subunit (SucA) of alpha-ketoglutarate dehydrogenase complex from Vibrio vulnificus for the enantioselective ligation of acetaldehydes into (R)-acetoin.
Catalysis Science And Technology, 2020
6KM9
DownloadVisualize
BU of 6km9 by Molmil
Crystal structure of SucA from Vibrio vulnificus
分子名称: CALCIUM ION, HEXAETHYLENE GLYCOL, MAGNESIUM ION, ...
著者Seo, P.W, Kim, J.S.
登録日2019-07-31
公開日2020-08-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.724 Å)
主引用文献Understanding the molecular properties of the E1 subunit (SucA) of alpha-ketoglutarate dehydrogenase complex from Vibrio vulnificus for the enantioselective ligation of acetaldehydes into (R)-acetoin.
Catalysis Science And Technology, 2020
1SMA
DownloadVisualize
BU of 1sma by Molmil
CRYSTAL STRUCTURE OF A MALTOGENIC AMYLASE
分子名称: MALTOGENIC AMYLASE
著者Kim, J.S, Cha, S.S, Oh, B.H.
登録日1999-04-21
公開日2000-04-26
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of a maltogenic amylase provides insights into a catalytic versatility.
J.Biol.Chem., 274, 1999
5Y7K
DownloadVisualize
BU of 5y7k by Molmil
Crystal structure of human DPP4 in complex with inhibitor1
分子名称: (R)-4-((R)-3-amino-4-(2,4,5-trifluorophenyl)butanoyl)-3-(tert-butoxymethyl)piperazine-2-one, Dipeptidyl peptidase 4
著者Lee, H.K, Kim, E.E.
登録日2017-08-17
公開日2019-03-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.512 Å)
主引用文献Unique binding mode of Evogliptin with human dipeptidyl peptidase IV.
Biochem.Biophys.Res.Commun., 494, 2017

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon